RNA–Protein interactions for RNA: ENST00000496854.1

ITGAV-208, Transcript of integrin subunit alpha V, human

TSL 3

Gene ITGAV, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGAV-208	ENST00000496854	ADCY10	Q96PN6	1610 aa		14.09	□□□□□ -0.15
ITGAV-208	ENST00000496854	DIP2B	Q9P265	1576 aa		14.06	□□□□□ -0.16
ITGAV-208	ENST00000496854	MAPKBP1	O60336	1514 aa		14.05	□□□□□ -0.16
ITGAV-208	ENST00000496854	GSE1	Q14687	1217 aa		14.02	□□□□□ -0.17
ITGAV-208	ENST00000496854	KIAA0586	Q9BVV6	1533 aa		14.01	□□□□□ -0.17
ITGAV-208	ENST00000496854	GALR2	O43603	387 aa	Predicted RBP	14.01	□□□□□ -0.17
ITGAV-208	ENST00000496854	JPH4	Q96JJ6	628 aa		14.01	□□□□□ -0.17
ITGAV-208	ENST00000496854	ABCC10	Q5T3U5	1492 aa		14	□□□□□ -0.17
ITGAV-208	ENST00000496854	KIF12	Q96FN5	646 aa		14	□□□□□ -0.17
ITGAV-208	ENST00000496854	CIZ1	Q9ULV3	898 aa	Predicted RBP	14	□□□□□ -0.17
ITGAV-208	ENST00000496854	KIF27	Q86VH2	1401 aa		13.99	□□□□□ -0.17
ITGAV-208	ENST00000496854	IGF1R	P08069	1367 aa		13.97	□□□□□ -0.17
ITGAV-208	ENST00000496854	MAP3K13	O43283	966 aa		13.96	□□□□□ -0.17
ITGAV-208	ENST00000496854	PYGB	P11216	843 aa		13.96	□□□□□ -0.17
ITGAV-208	ENST00000496854	MS4A3	Q96HJ5	214 aa		13.96	□□□□□ -0.17
ITGAV-208	ENST00000496854	IQGAP2	Q13576	1575 aa		13.94	□□□□□ -0.18
ITGAV-208	ENST00000496854	DCBLD2	Q96PD2	775 aa		13.93	□□□□□ -0.18
ITGAV-208	ENST00000496854	KDM6B	O15054	1643 aa		13.93	□□□□□ -0.18
ITGAV-208	ENST00000496854	TSPOAP1	O95153	1857 aa		13.92	□□□□□ -0.18
ITGAV-208	ENST00000496854	PCDHB13	Q9Y5F0	798 aa		13.91	□□□□□ -0.18
ITGAV-208	ENST00000496854	PPRC1	Q5VV67	1664 aa	Known RBP	13.89	□□□□□ -0.19
ITGAV-208	ENST00000496854	CARMIL1	Q5VZK9	1371 aa		13.89	□□□□□ -0.19
ITGAV-208	ENST00000496854	FAM69C	Q0P6D2	419 aa		13.89	□□□□□ -0.19
ITGAV-208	ENST00000496854	SGIP1	Q9BQI5	828 aa		13.87	□□□□□ -0.19
ITGAV-208	ENST00000496854	ABCC2	Q92887	1545 aa		13.86	□□□□□ -0.19
ITGAV-208	ENST00000496854	DISP1	Q96F81	1524 aa		13.86	□□□□□ -0.19
ITGAV-208	ENST00000496854	KIAA0556	O60303	1618 aa		13.85	□□□□□ -0.19
ITGAV-208	ENST00000496854	PTPRG	P23470	1445 aa		13.84	□□□□□ -0.19
ITGAV-208	ENST00000496854	TNIK	Q9UKE5	1360 aa		13.83	□□□□□ -0.19
ITGAV-208	ENST00000496854	POTEI	P0CG38	1075 aa		13.83	□□□□□ -0.2
ITGAV-208	ENST00000496854	IFNL1	Q8IU54	200 aa		13.83	□□□□□ -0.2
ITGAV-208	ENST00000496854	CARMIL2	Q6F5E8	1435 aa		13.82	□□□□□ -0.2
ITGAV-208	ENST00000496854	CTTNBP2	Q8WZ74	1663 aa		13.82	□□□□□ -0.2
ITGAV-208	ENST00000496854	UGGT2	Q9NYU1	1516 aa		13.82	□□□□□ -0.2
ITGAV-208	ENST00000496854	GLI2	P10070	1586 aa		13.82	□□□□□ -0.2
ITGAV-208	ENST00000496854	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.82	□□□□□ -0.2
ITGAV-208	ENST00000496854	ASXL2	Q76L83	1435 aa		13.81	□□□□□ -0.2
ITGAV-208	ENST00000496854	UHRF1BP1L	A0JNW5	1464 aa		13.81	□□□□□ -0.2
ITGAV-208	ENST00000496854	CHRM1	P11229	460 aa	Predicted RBP	13.81	□□□□□ -0.2
ITGAV-208	ENST00000496854	TRPC6	Q9Y210	931 aa		13.8	□□□□□ -0.2
ITGAV-208	ENST00000496854	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.8	□□□□□ -0.2
ITGAV-208	ENST00000496854	RAPGEF2	Q9Y4G8	1499 aa		13.8	□□□□□ -0.2
ITGAV-208	ENST00000496854	MAP3K4	Q9Y6R4	1608 aa		13.79	□□□□□ -0.2
ITGAV-208	ENST00000496854	PCDHB8	Q9UN66	801 aa		13.78	□□□□□ -0.2
ITGAV-208	ENST00000496854	UACA	Q9BZF9	1416 aa		13.78	□□□□□ -0.2
ITGAV-208	ENST00000496854	PLB1	Q6P1J6	1458 aa		13.77	□□□□□ -0.21
ITGAV-208	ENST00000496854	KDM5B	Q9UGL1	1544 aa		13.77	□□□□□ -0.21
ITGAV-208	ENST00000496854	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.75	□□□□□ -0.21
ITGAV-208	ENST00000496854	EPRS	P07814	1512 aa	Known RBP	13.74	□□□□□ -0.21
ITGAV-208	ENST00000496854	TIE1	P35590	1138 aa		13.74	□□□□□ -0.21
ITGAV-208	ENST00000496854	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.74	□□□□□ -0.21
ITGAV-208	ENST00000496854	ATMIN	O43313	823 aa	Predicted RBP	13.73	□□□□□ -0.21
ITGAV-208	ENST00000496854	ASTL	Q6HA08	431 aa	Predicted RBP	13.73	□□□□□ -0.21
ITGAV-208	ENST00000496854	KDM4F	A0A1W2PPD8	638 aa		13.71	□□□□□ -0.21
ITGAV-208	ENST00000496854	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.7	□□□□□ -0.22
ITGAV-208	ENST00000496854	ATN1	P54259	1190 aa	Predicted RBP	13.69	□□□□□ -0.22
ITGAV-208	ENST00000496854	TMEM106C	Q9BVX2	250 aa		13.69	□□□□□ -0.22
ITGAV-208	ENST00000496854	ABCA8	O94911	1581 aa		13.69	□□□□□ -0.22
ITGAV-208	ENST00000496854	WDR7	Q9Y4E6	1490 aa		13.68	□□□□□ -0.22
ITGAV-208	ENST00000496854	TTLL13P	A6NNM8	815 aa		13.68	□□□□□ -0.22
ITGAV-208	ENST00000496854	ADGRL1	O94910	1474 aa		13.67	□□□□□ -0.22
ITGAV-208	ENST00000496854	PELP1	Q8IZL8	1130 aa	Known RBP	13.67	□□□□□ -0.22
ITGAV-208	ENST00000496854	ECM2	O94769	699 aa	Predicted RBP	13.66	□□□□□ -0.22
ITGAV-208	ENST00000496854	TEX14	Q8IWB6	1497 aa		13.66	□□□□□ -0.22
ITGAV-208	ENST00000496854	PRX	Q9BXM0	1461 aa		13.66	□□□□□ -0.22
ITGAV-208	ENST00000496854	CFAP43	Q8NDM7	1665 aa		13.66	□□□□□ -0.22
ITGAV-208	ENST00000496854	PKD2	Q13563	968 aa		13.64	□□□□□ -0.23
ITGAV-208	ENST00000496854	GOLGA3	Q08378	1498 aa		13.63	□□□□□ -0.23
ITGAV-208	ENST00000496854	PSEN1	P49768	467 aa		13.62	□□□□□ -0.23
ITGAV-208	ENST00000496854	TRIM35	Q9UPQ4	493 aa		13.61	□□□□□ -0.23
ITGAV-208	ENST00000496854	PDAP1	Q13442	181 aa	Known RBP	13.6	□□□□□ -0.23
ITGAV-208	ENST00000496854	SLC39A7	Q92504	469 aa		13.6	□□□□□ -0.23
ITGAV-208	ENST00000496854	SAMD9	Q5K651	1589 aa		13.59	□□□□□ -0.23
ITGAV-208	ENST00000496854	RIOK3	O14730	519 aa	Known RBP	13.59	□□□□□ -0.23
ITGAV-208	ENST00000496854	MAGI3	Q5TCQ9	1506 aa		13.59	□□□□□ -0.23
ITGAV-208	ENST00000496854	RNF25	Q96BH1	459 aa	Predicted RBP	13.58	□□□□□ -0.24
ITGAV-208	ENST00000496854	METRN	Q9UJH8	293 aa		13.58	□□□□□ -0.24
ITGAV-208	ENST00000496854	KIF21B	O75037	1637 aa		13.57	□□□□□ -0.24
ITGAV-208	ENST00000496854	C7	P10643	843 aa		13.57	□□□□□ -0.24
ITGAV-208	ENST00000496854	HECW2	Q9P2P5	1572 aa		13.55	□□□□□ -0.24
ITGAV-208	ENST00000496854	CD109	Q6YHK3	1445 aa		13.55	□□□□□ -0.24
ITGAV-208	ENST00000496854	ABCA9	Q8IUA7	1624 aa		13.53	□□□□□ -0.24
ITGAV-208	ENST00000496854	RAPGEF6	Q8TEU7	1601 aa		13.53	□□□□□ -0.24
ITGAV-208	ENST00000496854	GOLGA2	Q08379	1002 aa		13.53	□□□□□ -0.24
ITGAV-208	ENST00000496854	VGF	O15240	615 aa	Predicted RBP	13.51	□□□□□ -0.25
ITGAV-208	ENST00000496854	LHX8	Q68G74	356 aa		13.51	□□□□□ -0.25
ITGAV-208	ENST00000496854	ATP10B	O94823	1461 aa		13.5	□□□□□ -0.25
ITGAV-208	ENST00000496854	RGL2	O15211	777 aa		13.5	□□□□□ -0.25
ITGAV-208	ENST00000496854	FRMPD1	Q5SYB0	1578 aa		13.49	□□□□□ -0.25
ITGAV-208	ENST00000496854	SEC24B	O95487	1268 aa		13.49	□□□□□ -0.25
ITGAV-208	ENST00000496854	IER5L	Q5T953	404 aa		13.49	□□□□□ -0.25
ITGAV-208	ENST00000496854	TAOK2	Q9UL54	1235 aa		13.49	□□□□□ -0.25
ITGAV-208	ENST00000496854	ARAP3	Q8WWN8	1544 aa		13.48	□□□□□ -0.25
ITGAV-208	ENST00000496854	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.47	□□□□□ -0.25
ITGAV-208	ENST00000496854	ARID3C	A6NKF2	412 aa		13.47	□□□□□ -0.25
ITGAV-208	ENST00000496854	ZFP91	Q96JP5	570 aa	Predicted RBP	13.47	□□□□□ -0.25
ITGAV-208	ENST00000496854	KCNH8	Q96L42	1107 aa		13.47	□□□□□ -0.25
ITGAV-208	ENST00000496854	MKRN3	Q13064	507 aa	Known RBP	13.46	□□□□□ -0.25
ITGAV-208	ENST00000496854	P3H3	Q8IVL6	736 aa		13.46	□□□□□ -0.25
ITGAV-208	ENST00000496854	CABP2	Q9NPB3	220 aa		13.46	□□□□□ -0.25

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