RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 SCAPERQ9BY12 1400 aa35.83■■■■□ 3.33
CHRD-217ENST00000496527 CDC42BPBQ9Y5S2 1711 aa35.81■■■■□ 3.32
CHRD-217ENST00000496527 CCNB3Q8WWL7 1395 aa35.8■■■■□ 3.32
CHRD-217ENST00000496527 FRMPD1Q5SYB0 1578 aa35.79■■■■□ 3.32
CHRD-217ENST00000496527 GPATCH8Q9UKJ3 1502 aaKnown RBP35.78■■■■□ 3.32
CHRD-217ENST00000496527 CDC42BPAQ5VT25 1732 aa35.78■■■■□ 3.32
CHRD-217ENST00000496527 APLP2Q06481 763 aa35.78■■■■□ 3.32
CHRD-217ENST00000496527 MAP3K1Q13233 1512 aa35.78■■■■□ 3.32
CHRD-217ENST00000496527 RICTORQ6R327 1708 aa35.75■■■■□ 3.31
CHRD-217ENST00000496527 LRRC9Q6ZRR7 1453 aa35.73■■■■□ 3.31
CHRD-217ENST00000496527 POGZQ7Z3K3 1410 aa35.73■■■■□ 3.31
CHRD-217ENST00000496527 CFDP1Q9UEE9 299 aaPredicted RBP35.72■■■■□ 3.31
CHRD-217ENST00000496527 ZNF777Q9ULD5 760 aaPredicted RBP35.72■■■■□ 3.31
CHRD-217ENST00000496527 SUPT6HQ7KZ85 1726 aaKnown RBP35.69■■■■□ 3.3
CHRD-217ENST00000496527 NCOA2Q15596 1464 aa35.68■■■■□ 3.3
CHRD-217ENST00000496527 KANK4Q5T7N3 995 aaPredicted RBP35.68■■■■□ 3.3
CHRD-217ENST00000496527 ZMYM4Q5VZL5 1548 aa35.66■■■■□ 3.3
CHRD-217ENST00000496527 ZNF518AQ6AHZ1 1483 aa35.64■■■■□ 3.3
CHRD-217ENST00000496527 ABCC1P33527 1531 aa35.63■■■■□ 3.29
CHRD-217ENST00000496527 AFAP1Q8N556 730 aa35.63■■■■□ 3.29
CHRD-217ENST00000496527 MAGI2Q86UL8 1455 aa35.61■■■■□ 3.29
CHRD-217ENST00000496527 AEBP2Q6ZN18 517 aaPredicted RBP35.61■■■■□ 3.29
CHRD-217ENST00000496527 ITSN2Q9NZM3 1697 aa35.6■■■■□ 3.29
CHRD-217ENST00000496527 SAMD9LQ8IVG5 1584 aa35.59■■■■□ 3.29
CHRD-217ENST00000496527 ARHGEF12Q9NZN5 1544 aa35.59■■■■□ 3.29
CHRD-217ENST00000496527 KDM4FA0A1W2PPD8 638 aa35.58■■■■□ 3.29
CHRD-217ENST00000496527 ZFYVE16Q7Z3T8 1539 aa35.57■■■■□ 3.28
CHRD-217ENST00000496527 ARHGEF40Q8TER5 1519 aa35.57■■■■□ 3.28
CHRD-217ENST00000496527 PLEKHH2Q8IVE3 1493 aa35.56■■■■□ 3.28
CHRD-217ENST00000496527 TRAPPC8Q9Y2L5 1435 aa35.56■■■■□ 3.28
CHRD-217ENST00000496527 MYT1LQ9UL68 1186 aa35.55■■■■□ 3.28
CHRD-217ENST00000496527 YEATS2Q9ULM3 1422 aa35.55■■■■□ 3.28
CHRD-217ENST00000496527 HNRNPMP52272 730 aaKnown RBP eCLIP35.54■■■■□ 3.28
CHRD-217ENST00000496527 KDM5CP41229 1560 aa35.53■■■■□ 3.28
CHRD-217ENST00000496527 KIAA1107Q9UPP5 1409 aa35.53■■■■□ 3.28
CHRD-217ENST00000496527 SYCP2Q9BX26 1530 aa35.52■■■■□ 3.28
CHRD-217ENST00000496527 ZNF644Q9H582 1327 aaPredicted RBP35.5■■■■□ 3.27
CHRD-217ENST00000496527 ARID4BQ4LE39 1312 aaPredicted RBP35.49■■■■□ 3.27
CHRD-217ENST00000496527 MLH3Q9UHC1 1453 aa35.45■■■■□ 3.27
CHRD-217ENST00000496527 HECW2Q9P2P5 1572 aa35.45■■■■□ 3.27
CHRD-217ENST00000496527 ATP10AO60312 1499 aa35.42■■■■□ 3.26
CHRD-217ENST00000496527 MYOM3Q5VTT5 1437 aa35.4■■■■□ 3.26
CHRD-217ENST00000496527 SPAG9O60271 1321 aaKnown RBP35.39■■■■□ 3.26
CHRD-217ENST00000496527 CAMSAP2Q08AD1 1489 aa35.38■■■■□ 3.25
CHRD-217ENST00000496527 C9orf84Q5VXU9 1444 aa35.38■■■■□ 3.25
CHRD-217ENST00000496527 MBD5Q9P267 1494 aa35.36■■■■□ 3.25
CHRD-217ENST00000496527 MIA2Q96PC5 1412 aa35.34■■■■□ 3.25
CHRD-217ENST00000496527 RSPH4AQ5TD94 716 aa35.32■■■■□ 3.24
CHRD-217ENST00000496527 DIP2CQ9Y2E4 1556 aa35.32■■■■□ 3.24
CHRD-217ENST00000496527 KIDINS220Q9ULH0 1771 aa35.31■■■■□ 3.24
CHRD-217ENST00000496527 ABCA6Q8N139 1617 aa35.3■■■■□ 3.24
CHRD-217ENST00000496527 BCORL1Q5H9F3 1711 aa35.28■■■■□ 3.24
CHRD-217ENST00000496527 ATP7AQ04656 1500 aa35.27■■■■□ 3.24
CHRD-217ENST00000496527 SIGLEC1Q9BZZ2 1709 aa35.26■■■■□ 3.24
CHRD-217ENST00000496527 CCDC141Q6ZP82 1450 aa35.26■■■■□ 3.23
CHRD-217ENST00000496527 MLECQ14165 292 aa35.24■■■■□ 3.23
CHRD-217ENST00000496527 ADAMTSL3P82987 1691 aa35.24■■■■□ 3.23
CHRD-217ENST00000496527 REREQ9P2R6 1566 aa35.23■■■■□ 3.23
CHRD-217ENST00000496527 INO80Q9ULG1 1556 aaPredicted RBP35.23■■■■□ 3.23
CHRD-217ENST00000496527 ARHGEF5Q12774 1597 aa35.21■■■■□ 3.23
CHRD-217ENST00000496527 TSPY4P0CV99 314 aa35.2■■■■□ 3.23
CHRD-217ENST00000496527 TSPY10P0CW01 314 aa35.2■■■■□ 3.23
CHRD-217ENST00000496527 RTEL1-TNFRSF6BF6WH68 1400 aa35.2■■■■□ 3.23
CHRD-217ENST00000496527 FGD6Q6ZV73 1430 aa35.18■■■■□ 3.22
CHRD-217ENST00000496527 PTPN23Q9H3S7 1636 aa35.15■■■■□ 3.22
CHRD-217ENST00000496527 MADDQ8WXG6 1647 aa35.14■■■■□ 3.22
CHRD-217ENST00000496527 AGLP35573 1532 aa35.13■■■■□ 3.21
CHRD-217ENST00000496527 PPARGC1BQ86YN6 1023 aaKnown RBP35.12■■■■□ 3.21
CHRD-217ENST00000496527 A2MP01023 1474 aa35.11■■■■□ 3.21
CHRD-217ENST00000496527 PTPRMP28827 1452 aa35.09■■■■□ 3.21
CHRD-217ENST00000496527 TCOF1Q13428 1488 aaKnown RBP35.09■■■■□ 3.21
CHRD-217ENST00000496527 ADGBQ8N7X0 1667 aa35.06■■■■□ 3.2
CHRD-217ENST00000496527 RIMS1Q86UR5 1692 aaKnown RBP35.05■■■■□ 3.2
CHRD-217ENST00000496527 PLXNC1O60486 1568 aa35.02■■■■□ 3.2
CHRD-217ENST00000496527 FAM50AQ14320 339 aaKnown RBP35.02■■■■□ 3.2
CHRD-217ENST00000496527 DHX29Q7Z478 1369 aaKnown RBP35.01■■■■□ 3.2
CHRD-217ENST00000496527 MAST1Q9Y2H9 1570 aa35.01■■■■□ 3.2
CHRD-217ENST00000496527 FER1L4A9Z1Z3 1794 aa35.01■■■■□ 3.2
CHRD-217ENST00000496527 ABCC5O15440 1437 aa35■■■■□ 3.19
CHRD-217ENST00000496527 ESF1Q9H501 851 aaKnown RBP34.99■■■■□ 3.19
CHRD-217ENST00000496527 DAPK1P53355 1430 aa34.98■■■■□ 3.19
CHRD-217ENST00000496527 PLPPR3Q6T4P5 718 aa34.95■■■■□ 3.19
CHRD-217ENST00000496527 DNMT1P26358 1616 aaKnown RBP34.95■■■■□ 3.18
CHRD-217ENST00000496527 SHANK2Q9UPX8 1470 aa34.94■■■■□ 3.18
CHRD-217ENST00000496527 GGT6Q6P531 493 aa34.92■■■■□ 3.18
CHRD-217ENST00000496527 CROCC2H7BZ55 1655 aa34.91■■■■□ 3.18
CHRD-217ENST00000496527 KIF3BO15066 747 aa34.89■■■■□ 3.18
CHRD-217ENST00000496527 CHIC2Q9UKJ5 165 aa34.86■■■■□ 3.17
CHRD-217ENST00000496527 CNTLNQ9NXG0 1405 aa34.86■■■■□ 3.17
CHRD-217ENST00000496527 PPP6R1Q9UPN7 881 aa34.84■■■■□ 3.17
CHRD-217ENST00000496527 CEBPAP49715 358 aaPredicted RBP34.83■■■■□ 3.17
CHRD-217ENST00000496527 RRP7BPQ9NSQ0 103 aa34.83■■■■□ 3.17
CHRD-217ENST00000496527 KIF15Q9NS87 1388 aa34.82■■■■□ 3.16
CHRD-217ENST00000496527 ANKRD30AQ9BXX3 1397 aa34.81■■■■□ 3.16
CHRD-217ENST00000496527 DUOX2Q9NRD8 1548 aa34.8■■■■□ 3.16
CHRD-217ENST00000496527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.74■■■■□ 3.15
CHRD-217ENST00000496527 NCOA1Q15788 1441 aa34.74■■■■□ 3.15
CHRD-217ENST00000496527 ZMYM3Q14202 1370 aa34.73■■■■□ 3.15
CHRD-217ENST00000496527 ADGRL2O95490 1459 aa34.71■■■■□ 3.15
CHRD-217ENST00000496527 EIF2AK4Q9P2K8 1649 aaKnown RBP34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms