RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 CDC42BPBQ9Y5S2 1711 aa23.16■■□□□ 1.3
PDAP1-204ENST00000496335 PREX2Q70Z35 1606 aa23.12■■□□□ 1.29
PDAP1-204ENST00000496335 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
PDAP1-204ENST00000496335 POGZQ7Z3K3 1410 aa23.11■■□□□ 1.29
PDAP1-204ENST00000496335 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
PDAP1-204ENST00000496335 ZMYM4Q5VZL5 1548 aa23.09■■□□□ 1.29
PDAP1-204ENST00000496335 ARHGEF40Q8TER5 1519 aa23.08■■□□□ 1.29
PDAP1-204ENST00000496335 YEATS2Q9ULM3 1422 aa23.07■■□□□ 1.28
PDAP1-204ENST00000496335 VPS8Q8N3P4 1428 aa23.06■■□□□ 1.28
PDAP1-204ENST00000496335 ZFYVE16Q7Z3T8 1539 aa23.05■■□□□ 1.28
PDAP1-204ENST00000496335 ARID4BQ4LE39 1312 aaPredicted RBP23.05■■□□□ 1.28
PDAP1-204ENST00000496335 GPATCH8Q9UKJ3 1502 aaKnown RBP23.04■■□□□ 1.28
PDAP1-204ENST00000496335 AFAP1Q8N556 730 aa23.04■■□□□ 1.28
PDAP1-204ENST00000496335 MAGI2Q86UL8 1455 aa23.04■■□□□ 1.28
PDAP1-204ENST00000496335 ZNF777Q9ULD5 760 aaPredicted RBP23.03■■□□□ 1.28
PDAP1-204ENST00000496335 ARHGEF12Q9NZN5 1544 aa23.03■■□□□ 1.28
PDAP1-204ENST00000496335 ZNF518AQ6AHZ1 1483 aa23.02■■□□□ 1.28
PDAP1-204ENST00000496335 EHBP1L1Q8N3D4 1523 aa23.02■■□□□ 1.28
PDAP1-204ENST00000496335 CCNB3Q8WWL7 1395 aa23.01■■□□□ 1.27
PDAP1-204ENST00000496335 ABCC1P33527 1531 aa23.01■■□□□ 1.27
PDAP1-204ENST00000496335 SIGLEC1Q9BZZ2 1709 aa22.99■■□□□ 1.27
PDAP1-204ENST00000496335 ITSN2Q9NZM3 1697 aa22.99■■□□□ 1.27
PDAP1-204ENST00000496335 TRAPPC8Q9Y2L5 1435 aa22.99■■□□□ 1.27
PDAP1-204ENST00000496335 KDM5CP41229 1560 aa22.98■■□□□ 1.27
PDAP1-204ENST00000496335 TIAM1Q13009 1591 aa22.98■■□□□ 1.27
PDAP1-204ENST00000496335 ADAMTSL3P82987 1691 aa22.98■■□□□ 1.27
PDAP1-204ENST00000496335 BCORL1Q5H9F3 1711 aa22.98■■□□□ 1.27
PDAP1-204ENST00000496335 SAMD9LQ8IVG5 1584 aa22.97■■□□□ 1.27
PDAP1-204ENST00000496335 CFDP1Q9UEE9 299 aaPredicted RBP22.97■■□□□ 1.27
PDAP1-204ENST00000496335 MYT1LQ9UL68 1186 aa22.96■■□□□ 1.27
PDAP1-204ENST00000496335 ATP10AO60312 1499 aa22.94■■□□□ 1.26
PDAP1-204ENST00000496335 HECW2Q9P2P5 1572 aa22.93■■□□□ 1.26
PDAP1-204ENST00000496335 HNRNPMP52272 730 aaKnown RBP eCLIP22.93■■□□□ 1.26
PDAP1-204ENST00000496335 SYCP2Q9BX26 1530 aa22.92■■□□□ 1.26
PDAP1-204ENST00000496335 SUPT6HQ7KZ85 1726 aaKnown RBP22.92■■□□□ 1.26
PDAP1-204ENST00000496335 MADDQ8WXG6 1647 aa22.91■■□□□ 1.26
PDAP1-204ENST00000496335 NCOA2Q15596 1464 aa22.91■■□□□ 1.26
PDAP1-204ENST00000496335 MLH3Q9UHC1 1453 aa22.9■■□□□ 1.26
PDAP1-204ENST00000496335 C9orf84Q5VXU9 1444 aa22.9■■□□□ 1.26
PDAP1-204ENST00000496335 ZNF644Q9H582 1327 aaPredicted RBP22.89■■□□□ 1.26
PDAP1-204ENST00000496335 MLECQ14165 292 aa22.89■■□□□ 1.25
PDAP1-204ENST00000496335 KANK4Q5T7N3 995 aaPredicted RBP22.89■■□□□ 1.25
PDAP1-204ENST00000496335 LRRC9Q6ZRR7 1453 aa22.89■■□□□ 1.25
PDAP1-204ENST00000496335 DIP2CQ9Y2E4 1556 aa22.89■■□□□ 1.25
PDAP1-204ENST00000496335 ABCA6Q8N139 1617 aa22.88■■□□□ 1.25
PDAP1-204ENST00000496335 PTPRMP28827 1452 aa22.87■■□□□ 1.25
PDAP1-204ENST00000496335 KIDINS220Q9ULH0 1771 aa22.87■■□□□ 1.25
PDAP1-204ENST00000496335 KIAA1107Q9UPP5 1409 aa22.87■■□□□ 1.25
PDAP1-204ENST00000496335 PLEKHH2Q8IVE3 1493 aa22.86■■□□□ 1.25
PDAP1-204ENST00000496335 RIMS1Q86UR5 1692 aaKnown RBP22.85■■□□□ 1.25
PDAP1-204ENST00000496335 MAP3K1Q13233 1512 aa22.85■■□□□ 1.25
PDAP1-204ENST00000496335 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
PDAP1-204ENST00000496335 FER1L4A9Z1Z3 1794 aa22.79■■□□□ 1.24
PDAP1-204ENST00000496335 REREQ9P2R6 1566 aa22.79■■□□□ 1.24
PDAP1-204ENST00000496335 MBD5Q9P267 1494 aa22.79■■□□□ 1.24
PDAP1-204ENST00000496335 APLP2Q06481 763 aa22.78■■□□□ 1.24
PDAP1-204ENST00000496335 PLPPR3Q6T4P5 718 aa22.78■■□□□ 1.24
PDAP1-204ENST00000496335 ATP7AQ04656 1500 aa22.77■■□□□ 1.24
PDAP1-204ENST00000496335 CAMSAP2Q08AD1 1489 aa22.76■■□□□ 1.23
PDAP1-204ENST00000496335 INO80Q9ULG1 1556 aaPredicted RBP22.76■■□□□ 1.23
PDAP1-204ENST00000496335 AGLP35573 1532 aa22.73■■□□□ 1.23
PDAP1-204ENST00000496335 MYOM3Q5VTT5 1437 aa22.69■■□□□ 1.22
PDAP1-204ENST00000496335 CCDC141Q6ZP82 1450 aa22.68■■□□□ 1.22
PDAP1-204ENST00000496335 A2MP01023 1474 aa22.67■■□□□ 1.22
PDAP1-204ENST00000496335 CEBPAP49715 358 aaPredicted RBP22.67■■□□□ 1.22
PDAP1-204ENST00000496335 RTEL1-TNFRSF6BF6WH68 1400 aa22.65■■□□□ 1.22
PDAP1-204ENST00000496335 RSPH4AQ5TD94 716 aa22.65■■□□□ 1.22
PDAP1-204ENST00000496335 ADGBQ8N7X0 1667 aa22.65■■□□□ 1.22
PDAP1-204ENST00000496335 PLXNC1O60486 1568 aa22.64■■□□□ 1.22
PDAP1-204ENST00000496335 ARHGEF5Q12774 1597 aa22.64■■□□□ 1.22
PDAP1-204ENST00000496335 MIA2Q96PC5 1412 aa22.64■■□□□ 1.21
PDAP1-204ENST00000496335 ESF1Q9H501 851 aaKnown RBP22.61■■□□□ 1.21
PDAP1-204ENST00000496335 LMTK3Q96Q04 1460 aa22.6■■□□□ 1.21
PDAP1-204ENST00000496335 TSPY4P0CV99 314 aa22.6■■□□□ 1.21
PDAP1-204ENST00000496335 TSPY10P0CW01 314 aa22.6■■□□□ 1.21
PDAP1-204ENST00000496335 GGT6Q6P531 493 aa22.58■■□□□ 1.21
PDAP1-204ENST00000496335 DHX29Q7Z478 1369 aaKnown RBP22.58■■□□□ 1.21
PDAP1-204ENST00000496335 C3P01024 1663 aa22.58■■□□□ 1.2
PDAP1-204ENST00000496335 PTPN23Q9H3S7 1636 aa22.56■■□□□ 1.2
PDAP1-204ENST00000496335 HSPA2P54652 639 aa22.54■■□□□ 1.2
PDAP1-204ENST00000496335 FGD6Q6ZV73 1430 aa22.54■■□□□ 1.2
PDAP1-204ENST00000496335 CNTLNQ9NXG0 1405 aa22.54■■□□□ 1.2
PDAP1-204ENST00000496335 SETD1BQ9UPS6 1966 aaKnown RBP22.53■■□□□ 1.2
PDAP1-204ENST00000496335 MAST1Q9Y2H9 1570 aa22.53■■□□□ 1.2
PDAP1-204ENST00000496335 CLTCQ00610 1675 aaKnown RBP22.52■■□□□ 1.2
PDAP1-204ENST00000496335 KIF3BO15066 747 aa22.52■■□□□ 1.2
PDAP1-204ENST00000496335 PREX1Q8TCU6 1659 aa22.51■■□□□ 1.19
PDAP1-204ENST00000496335 MROH2AA6NES4 1674 aa22.49■■□□□ 1.19
PDAP1-204ENST00000496335 ZMYM3Q14202 1370 aa22.49■■□□□ 1.19
PDAP1-204ENST00000496335 TCOF1Q13428 1488 aaKnown RBP22.48■■□□□ 1.19
PDAP1-204ENST00000496335 ABCC5O15440 1437 aa22.48■■□□□ 1.19
PDAP1-204ENST00000496335 CROCC2H7BZ55 1655 aa22.46■■□□□ 1.19
PDAP1-204ENST00000496335 PPARGC1BQ86YN6 1023 aaKnown RBP22.45■■□□□ 1.18
PDAP1-204ENST00000496335 PPP6R1Q9UPN7 881 aa22.45■■□□□ 1.18
PDAP1-204ENST00000496335 DNMT1P26358 1616 aaKnown RBP22.44■■□□□ 1.18
PDAP1-204ENST00000496335 DAPK1P53355 1430 aa22.44■■□□□ 1.18
PDAP1-204ENST00000496335 UHRF1BP1Q6BDS2 1440 aa22.43■■□□□ 1.18
PDAP1-204ENST00000496335 SHANK2Q9UPX8 1470 aa22.41■■□□□ 1.18
PDAP1-204ENST00000496335 FAM50AQ14320 339 aaKnown RBP22.41■■□□□ 1.18
PDAP1-204ENST00000496335 RRP7BPQ9NSQ0 103 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms