RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 GPATCH8Q9UKJ3 1502 aaKnown RBP26.2■■□□□ 1.79
CNOT3-207ENST00000496327 KANK4Q5T7N3 995 aaPredicted RBP26.19■■□□□ 1.78
CNOT3-207ENST00000496327 DENND4BO75064 1496 aaPredicted RBP26.18■■□□□ 1.78
CNOT3-207ENST00000496327 ADGRL1O94910 1474 aa26.18■■□□□ 1.78
CNOT3-207ENST00000496327 PREX2Q70Z35 1606 aa26.18■■□□□ 1.78
CNOT3-207ENST00000496327 RAPGEF3O95398 923 aa26.17■■□□□ 1.78
CNOT3-207ENST00000496327 NCOA2Q15596 1464 aa26.17■■□□□ 1.78
CNOT3-207ENST00000496327 SCAPERQ9BY12 1400 aa26.15■■□□□ 1.78
CNOT3-207ENST00000496327 CFDP1Q9UEE9 299 aaPredicted RBP26.14■■□□□ 1.78
CNOT3-207ENST00000496327 SUPT6HQ7KZ85 1726 aaKnown RBP26.13■■□□□ 1.77
CNOT3-207ENST00000496327 CDC42BPAQ5VT25 1732 aa26.11■■□□□ 1.77
CNOT3-207ENST00000496327 CDC42BPBQ9Y5S2 1711 aa26.11■■□□□ 1.77
CNOT3-207ENST00000496327 POGZQ7Z3K3 1410 aa26.1■■□□□ 1.77
CNOT3-207ENST00000496327 FRMPD1Q5SYB0 1578 aa26.09■■□□□ 1.77
CNOT3-207ENST00000496327 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
CNOT3-207ENST00000496327 ABCC1P33527 1531 aa26.06■■□□□ 1.76
CNOT3-207ENST00000496327 PLEKHH2Q8IVE3 1493 aa26.04■■□□□ 1.76
CNOT3-207ENST00000496327 ITSN2Q9NZM3 1697 aa26.03■■□□□ 1.76
CNOT3-207ENST00000496327 RICTORQ6R327 1708 aa26.03■■□□□ 1.76
CNOT3-207ENST00000496327 ZNF518AQ6AHZ1 1483 aa26.03■■□□□ 1.76
CNOT3-207ENST00000496327 SAMD9LQ8IVG5 1584 aa26.03■■□□□ 1.76
CNOT3-207ENST00000496327 ZMYM4Q5VZL5 1548 aa26.02■■□□□ 1.76
CNOT3-207ENST00000496327 ARHGEF12Q9NZN5 1544 aa26.02■■□□□ 1.76
CNOT3-207ENST00000496327 KIAA1107Q9UPP5 1409 aa26.01■■□□□ 1.75
CNOT3-207ENST00000496327 AFAP1Q8N556 730 aa26■■□□□ 1.75
CNOT3-207ENST00000496327 TRAPPC8Q9Y2L5 1435 aa25.99■■□□□ 1.75
CNOT3-207ENST00000496327 MAGI2Q86UL8 1455 aa25.98■■□□□ 1.75
CNOT3-207ENST00000496327 SYCP2Q9BX26 1530 aa25.98■■□□□ 1.75
CNOT3-207ENST00000496327 MYOM3Q5VTT5 1437 aa25.97■■□□□ 1.75
CNOT3-207ENST00000496327 ZNF644Q9H582 1327 aaPredicted RBP25.97■■□□□ 1.75
CNOT3-207ENST00000496327 HNRNPMP52272 730 aaKnown RBP eCLIP25.96■■□□□ 1.75
CNOT3-207ENST00000496327 KDM5CP41229 1560 aa25.95■■□□□ 1.75
CNOT3-207ENST00000496327 MIA2Q96PC5 1412 aa25.94■■□□□ 1.74
CNOT3-207ENST00000496327 ZFYVE16Q7Z3T8 1539 aa25.93■■□□□ 1.74
CNOT3-207ENST00000496327 ARHGEF40Q8TER5 1519 aa25.93■■□□□ 1.74
CNOT3-207ENST00000496327 YEATS2Q9ULM3 1422 aa25.93■■□□□ 1.74
CNOT3-207ENST00000496327 CAMSAP2Q08AD1 1489 aa25.91■■□□□ 1.74
CNOT3-207ENST00000496327 MYT1LQ9UL68 1186 aa25.9■■□□□ 1.74
CNOT3-207ENST00000496327 MLH3Q9UHC1 1453 aa25.9■■□□□ 1.74
CNOT3-207ENST00000496327 MBD5Q9P267 1494 aa25.89■■□□□ 1.73
CNOT3-207ENST00000496327 HECW2Q9P2P5 1572 aa25.87■■□□□ 1.73
CNOT3-207ENST00000496327 SPAG9O60271 1321 aaKnown RBP25.87■■□□□ 1.73
CNOT3-207ENST00000496327 RSPH4AQ5TD94 716 aa25.85■■□□□ 1.73
CNOT3-207ENST00000496327 FGD6Q6ZV73 1430 aa25.84■■□□□ 1.73
CNOT3-207ENST00000496327 ATP10AO60312 1499 aa25.84■■□□□ 1.73
CNOT3-207ENST00000496327 CCDC141Q6ZP82 1450 aa25.83■■□□□ 1.73
CNOT3-207ENST00000496327 C9orf84Q5VXU9 1444 aa25.81■■□□□ 1.72
CNOT3-207ENST00000496327 PPARGC1BQ86YN6 1023 aaKnown RBP25.81■■□□□ 1.72
CNOT3-207ENST00000496327 ARID4BQ4LE39 1312 aaPredicted RBP25.8■■□□□ 1.72
CNOT3-207ENST00000496327 KDM4FA0A1W2PPD8 638 aa25.79■■□□□ 1.72
CNOT3-207ENST00000496327 ARHGEF5Q12774 1597 aa25.78■■□□□ 1.72
CNOT3-207ENST00000496327 DIP2CQ9Y2E4 1556 aa25.78■■□□□ 1.72
CNOT3-207ENST00000496327 TCOF1Q13428 1488 aaKnown RBP25.77■■□□□ 1.72
CNOT3-207ENST00000496327 ATP7AQ04656 1500 aa25.77■■□□□ 1.72
CNOT3-207ENST00000496327 PTPN23Q9H3S7 1636 aa25.77■■□□□ 1.72
CNOT3-207ENST00000496327 KIDINS220Q9ULH0 1771 aa25.75■■□□□ 1.71
CNOT3-207ENST00000496327 ABCA6Q8N139 1617 aa25.75■■□□□ 1.71
CNOT3-207ENST00000496327 INO80Q9ULG1 1556 aaPredicted RBP25.75■■□□□ 1.71
CNOT3-207ENST00000496327 RTEL1-TNFRSF6BF6WH68 1400 aa25.75■■□□□ 1.71
CNOT3-207ENST00000496327 TSPY4P0CV99 314 aa25.74■■□□□ 1.71
CNOT3-207ENST00000496327 TSPY10P0CW01 314 aa25.74■■□□□ 1.71
CNOT3-207ENST00000496327 REREQ9P2R6 1566 aa25.72■■□□□ 1.71
CNOT3-207ENST00000496327 FAM50AQ14320 339 aaKnown RBP25.68■■□□□ 1.7
CNOT3-207ENST00000496327 ABCC5O15440 1437 aa25.67■■□□□ 1.7
CNOT3-207ENST00000496327 A2MP01023 1474 aa25.66■■□□□ 1.7
CNOT3-207ENST00000496327 AGLP35573 1532 aa25.66■■□□□ 1.7
CNOT3-207ENST00000496327 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
CNOT3-207ENST00000496327 SIGLEC1Q9BZZ2 1709 aa25.65■■□□□ 1.7
CNOT3-207ENST00000496327 MAST1Q9Y2H9 1570 aa25.65■■□□□ 1.7
CNOT3-207ENST00000496327 DAPK1P53355 1430 aa25.64■■□□□ 1.7
CNOT3-207ENST00000496327 MLECQ14165 292 aa25.64■■□□□ 1.7
CNOT3-207ENST00000496327 BCORL1Q5H9F3 1711 aa25.63■■□□□ 1.69
CNOT3-207ENST00000496327 SHANK2Q9UPX8 1470 aa25.63■■□□□ 1.69
CNOT3-207ENST00000496327 DNMT1P26358 1616 aaKnown RBP25.61■■□□□ 1.69
CNOT3-207ENST00000496327 DHX29Q7Z478 1369 aaKnown RBP25.6■■□□□ 1.69
CNOT3-207ENST00000496327 ADAMTSL3P82987 1691 aa25.6■■□□□ 1.69
CNOT3-207ENST00000496327 PLXNC1O60486 1568 aa25.6■■□□□ 1.69
CNOT3-207ENST00000496327 ADGBQ8N7X0 1667 aa25.57■■□□□ 1.68
CNOT3-207ENST00000496327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.56■■□□□ 1.68
CNOT3-207ENST00000496327 RRBP1Q9P2E9 1410 aaKnown RBP25.54■■□□□ 1.68
CNOT3-207ENST00000496327 MADDQ8WXG6 1647 aa25.54■■□□□ 1.68
CNOT3-207ENST00000496327 CROCC2H7BZ55 1655 aa25.54■■□□□ 1.68
CNOT3-207ENST00000496327 CHIC2Q9UKJ5 165 aa25.52■■□□□ 1.68
CNOT3-207ENST00000496327 ANKRD30AQ9BXX3 1397 aa25.52■■□□□ 1.68
CNOT3-207ENST00000496327 KIF15Q9NS87 1388 aa25.52■■□□□ 1.68
CNOT3-207ENST00000496327 PTPRMP28827 1452 aa25.5■■□□□ 1.67
CNOT3-207ENST00000496327 RRP7BPQ9NSQ0 103 aa25.49■■□□□ 1.67
CNOT3-207ENST00000496327 ADGRL2O95490 1459 aa25.48■■□□□ 1.67
CNOT3-207ENST00000496327 KIF3BO15066 747 aa25.48■■□□□ 1.67
CNOT3-207ENST00000496327 DUOX2Q9NRD8 1548 aa25.47■■□□□ 1.67
CNOT3-207ENST00000496327 NCOA1Q15788 1441 aa25.47■■□□□ 1.67
CNOT3-207ENST00000496327 GGT6Q6P531 493 aa25.47■■□□□ 1.67
CNOT3-207ENST00000496327 ESF1Q9H501 851 aaKnown RBP25.47■■□□□ 1.67
CNOT3-207ENST00000496327 PTPRKQ15262 1439 aa25.46■■□□□ 1.67
CNOT3-207ENST00000496327 ITGAEP38570 1179 aa25.44■■□□□ 1.66
CNOT3-207ENST00000496327 PPP6R1Q9UPN7 881 aa25.44■■□□□ 1.66
CNOT3-207ENST00000496327 RIMS1Q86UR5 1692 aaKnown RBP25.44■■□□□ 1.66
CNOT3-207ENST00000496327 CNTLNQ9NXG0 1405 aa25.44■■□□□ 1.66
CNOT3-207ENST00000496327 FER1L4A9Z1Z3 1794 aa25.43■■□□□ 1.66
CNOT3-207ENST00000496327 ERBINQ96RT1 1412 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms