RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 TRHP20396 242 aaPredicted RBP33.39■■■□□ 2.94
ECHDC3-205ENST00000496136 ZNF777Q9ULD5 760 aaPredicted RBP33.36■■■□□ 2.93
ECHDC3-205ENST00000496136 RRBP1Q9P2E9 1410 aaKnown RBP33.36■■■□□ 2.93
ECHDC3-205ENST00000496136 ARHGAP5Q13017 1502 aa33.35■■■□□ 2.93
ECHDC3-205ENST00000496136 ARAP3Q8WWN8 1544 aa33.35■■■□□ 2.93
ECHDC3-205ENST00000496136 EFCAB2Q5VUJ9 269 aa33.35■■■□□ 2.93
ECHDC3-205ENST00000496136 ZNF644Q9H582 1327 aaPredicted RBP33.34■■■□□ 2.93
ECHDC3-205ENST00000496136 TSPOAP1O95153 1857 aa33.3■■■□□ 2.92
ECHDC3-205ENST00000496136 PTPN23Q9H3S7 1636 aa33.3■■■□□ 2.92
ECHDC3-205ENST00000496136 FANCAO15360 1455 aa33.29■■■□□ 2.92
ECHDC3-205ENST00000496136 FAM50AQ14320 339 aaKnown RBP33.28■■■□□ 2.92
ECHDC3-205ENST00000496136 TCOF1Q13428 1488 aaKnown RBP33.26■■■□□ 2.92
ECHDC3-205ENST00000496136 TRIM26Q12899 539 aaPredicted RBP33.25■■■□□ 2.91
ECHDC3-205ENST00000496136 PPRC1Q5VV67 1664 aaKnown RBP33.24■■■□□ 2.91
ECHDC3-205ENST00000496136 SAMD9LQ8IVG5 1584 aa33.24■■■□□ 2.91
ECHDC3-205ENST00000496136 CAMSAP2Q08AD1 1489 aa33.24■■■□□ 2.91
ECHDC3-205ENST00000496136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.22■■■□□ 2.91
ECHDC3-205ENST00000496136 AKNAQ7Z591 1439 aa33.2■■■□□ 2.9
ECHDC3-205ENST00000496136 NEO1Q92859 1461 aa33.19■■■□□ 2.9
ECHDC3-205ENST00000496136 TEX14Q8IWB6 1497 aa33.18■■■□□ 2.9
ECHDC3-205ENST00000496136 HNRNPMP52272 730 aaKnown RBP eCLIP33.17■■■□□ 2.9
ECHDC3-205ENST00000496136 CFAP74Q9C0B2 1584 aa33.16■■■□□ 2.9
ECHDC3-205ENST00000496136 KIAA1107Q9UPP5 1409 aa33.16■■■□□ 2.9
ECHDC3-205ENST00000496136 PLEKHH2Q8IVE3 1493 aa33.15■■■□□ 2.9
ECHDC3-205ENST00000496136 ARHGEF12Q9NZN5 1544 aa33.13■■■□□ 2.89
ECHDC3-205ENST00000496136 ADGRL1O94910 1474 aa33.13■■■□□ 2.89
ECHDC3-205ENST00000496136 ABCC1P33527 1531 aa33.12■■■□□ 2.89
ECHDC3-205ENST00000496136 MBD5Q9P267 1494 aa33.12■■■□□ 2.89
ECHDC3-205ENST00000496136 SCAPERQ9BY12 1400 aa33.11■■■□□ 2.89
ECHDC3-205ENST00000496136 SYCP2Q9BX26 1530 aa33.1■■■□□ 2.89
ECHDC3-205ENST00000496136 ITGAEP38570 1179 aa33.09■■■□□ 2.89
ECHDC3-205ENST00000496136 RSPH4AQ5TD94 716 aa33.09■■■□□ 2.89
ECHDC3-205ENST00000496136 ABCC5O15440 1437 aa33.05■■■□□ 2.88
ECHDC3-205ENST00000496136 ARHGEF5Q12774 1597 aa33.04■■■□□ 2.88
ECHDC3-205ENST00000496136 TRAPPC8Q9Y2L5 1435 aa33.03■■■□□ 2.88
ECHDC3-205ENST00000496136 DNMT1P26358 1616 aaKnown RBP33.03■■■□□ 2.88
ECHDC3-205ENST00000496136 DAPK1P53355 1430 aa33.03■■■□□ 2.88
ECHDC3-205ENST00000496136 AFAP1Q8N556 730 aa33.02■■■□□ 2.88
ECHDC3-205ENST00000496136 PTPRKQ15262 1439 aa33■■■□□ 2.87
ECHDC3-205ENST00000496136 CCDC141Q6ZP82 1450 aa33■■■□□ 2.87
ECHDC3-205ENST00000496136 PCGF6Q9BYE7 350 aa32.99■■■□□ 2.87
ECHDC3-205ENST00000496136 DENND4BO75064 1496 aaPredicted RBP32.98■■■□□ 2.87
ECHDC3-205ENST00000496136 RAPGEF3O95398 923 aa32.98■■■□□ 2.87
ECHDC3-205ENST00000496136 TSPY4P0CV99 314 aa32.98■■■□□ 2.87
ECHDC3-205ENST00000496136 TSPY10P0CW01 314 aa32.98■■■□□ 2.87
ECHDC3-205ENST00000496136 CHIC2Q9UKJ5 165 aa32.95■■■□□ 2.87
ECHDC3-205ENST00000496136 COL17A1Q9UMD9 1497 aaPredicted RBP32.95■■■□□ 2.86
ECHDC3-205ENST00000496136 POGZQ7Z3K3 1410 aa32.94■■■□□ 2.86
ECHDC3-205ENST00000496136 ZNF518AQ6AHZ1 1483 aa32.93■■■□□ 2.86
ECHDC3-205ENST00000496136 CROCC2H7BZ55 1655 aa32.91■■■□□ 2.86
ECHDC3-205ENST00000496136 RICTORQ6R327 1708 aa32.9■■■□□ 2.86
ECHDC3-205ENST00000496136 C9orf84Q5VXU9 1444 aa32.89■■■□□ 2.86
ECHDC3-205ENST00000496136 SHANK2Q9UPX8 1470 aa32.88■■■□□ 2.85
ECHDC3-205ENST00000496136 SPAG9O60271 1321 aaKnown RBP32.88■■■□□ 2.85
ECHDC3-205ENST00000496136 KDM5CP41229 1560 aa32.85■■■□□ 2.85
ECHDC3-205ENST00000496136 FRMPD1Q5SYB0 1578 aa32.84■■■□□ 2.85
ECHDC3-205ENST00000496136 MAST1Q9Y2H9 1570 aa32.83■■■□□ 2.85
ECHDC3-205ENST00000496136 RTEL1-TNFRSF6BF6WH68 1400 aa32.82■■■□□ 2.84
ECHDC3-205ENST00000496136 NCOA1Q15788 1441 aa32.81■■■□□ 2.84
ECHDC3-205ENST00000496136 MYT1LQ9UL68 1186 aa32.81■■■□□ 2.84
ECHDC3-205ENST00000496136 ROCK1Q13464 1354 aa32.8■■■□□ 2.84
ECHDC3-205ENST00000496136 RRP7BPQ9NSQ0 103 aa32.8■■■□□ 2.84
ECHDC3-205ENST00000496136 MLH3Q9UHC1 1453 aa32.8■■■□□ 2.84
ECHDC3-205ENST00000496136 ANKRD30AQ9BXX3 1397 aa32.79■■■□□ 2.84
ECHDC3-205ENST00000496136 ADGRL2O95490 1459 aa32.79■■■□□ 2.84
ECHDC3-205ENST00000496136 KDM6BO15054 1643 aa32.78■■■□□ 2.84
ECHDC3-205ENST00000496136 ATP7AQ04656 1500 aa32.77■■■□□ 2.84
ECHDC3-205ENST00000496136 ZFYVE16Q7Z3T8 1539 aa32.77■■■□□ 2.84
ECHDC3-205ENST00000496136 ADGBQ8N7X0 1667 aa32.76■■■□□ 2.84
ECHDC3-205ENST00000496136 INO80Q9ULG1 1556 aaPredicted RBP32.76■■■□□ 2.84
ECHDC3-205ENST00000496136 KIDINS220Q9ULH0 1771 aa32.76■■■□□ 2.83
ECHDC3-205ENST00000496136 HECW2Q9P2P5 1572 aa32.74■■■□□ 2.83
ECHDC3-205ENST00000496136 ZMYM4Q5VZL5 1548 aa32.74■■■□□ 2.83
ECHDC3-205ENST00000496136 HFM1A2PYH4 1435 aa32.71■■■□□ 2.83
ECHDC3-205ENST00000496136 MAGI2Q86UL8 1455 aa32.7■■■□□ 2.83
ECHDC3-205ENST00000496136 NAIPQ13075 1403 aa32.69■■■□□ 2.82
ECHDC3-205ENST00000496136 PLXNC1O60486 1568 aa32.69■■■□□ 2.82
ECHDC3-205ENST00000496136 KIF15Q9NS87 1388 aa32.69■■■□□ 2.82
ECHDC3-205ENST00000496136 YEATS2Q9ULM3 1422 aa32.67■■■□□ 2.82
ECHDC3-205ENST00000496136 SETD5Q9C0A6 1442 aa32.64■■■□□ 2.82
ECHDC3-205ENST00000496136 ABCA6Q8N139 1617 aa32.62■■■□□ 2.81
ECHDC3-205ENST00000496136 GCC2Q8IWJ2 1684 aa32.6■■■□□ 2.81
ECHDC3-205ENST00000496136 DIP2CQ9Y2E4 1556 aa32.59■■■□□ 2.81
ECHDC3-205ENST00000496136 DUOX2Q9NRD8 1548 aa32.59■■■□□ 2.81
ECHDC3-205ENST00000496136 ANKRD50Q9ULJ7 1429 aa32.59■■■□□ 2.81
ECHDC3-205ENST00000496136 DHX29Q7Z478 1369 aaKnown RBP32.58■■■□□ 2.81
ECHDC3-205ENST00000496136 RAB3GAP2Q9H2M9 1393 aa32.56■■■□□ 2.8
ECHDC3-205ENST00000496136 A2MP01023 1474 aa32.55■■■□□ 2.8
ECHDC3-205ENST00000496136 ATP10AO60312 1499 aa32.55■■■□□ 2.8
ECHDC3-205ENST00000496136 ARHGEF40Q8TER5 1519 aa32.51■■■□□ 2.8
ECHDC3-205ENST00000496136 ERBINQ96RT1 1412 aa32.51■■■□□ 2.79
ECHDC3-205ENST00000496136 HRCP23327 699 aa32.5■■■□□ 2.79
ECHDC3-205ENST00000496136 AEBP2Q6ZN18 517 aaPredicted RBP32.46■■■□□ 2.79
ECHDC3-205ENST00000496136 KIF3BO15066 747 aa32.45■■■□□ 2.78
ECHDC3-205ENST00000496136 REREQ9P2R6 1566 aa32.44■■■□□ 2.78
ECHDC3-205ENST00000496136 EIF2AK4Q9P2K8 1649 aaKnown RBP32.4■■■□□ 2.78
ECHDC3-205ENST00000496136 SIGLEC1Q9BZZ2 1709 aa32.38■■■□□ 2.77
ECHDC3-205ENST00000496136 TRIM52Q96A61 297 aa32.37■■■□□ 2.77
ECHDC3-205ENST00000496136 ACIN1Q9UKV3 1341 aaKnown RBP32.36■■■□□ 2.77
ECHDC3-205ENST00000496136 AGLP35573 1532 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms