RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 ARAP3Q8WWN8 1544 aa19.73■□□□□ 0.75
MRPL55-233ENST00000495899 PLCH2O75038 1416 aa19.7■□□□□ 0.74
MRPL55-233ENST00000495899 LRRIQ1Q96JM4 1722 aa19.69■□□□□ 0.74
MRPL55-233ENST00000495899 TTC37Q6PGP7 1564 aa19.68■□□□□ 0.74
MRPL55-233ENST00000495899 FANCAO15360 1455 aa19.67■□□□□ 0.74
MRPL55-233ENST00000495899 KIF14Q15058 1648 aa19.66■□□□□ 0.74
MRPL55-233ENST00000495899 EFCAB2Q5VUJ9 269 aa19.66■□□□□ 0.74
MRPL55-233ENST00000495899 AKNAQ7Z591 1439 aa19.65■□□□□ 0.74
MRPL55-233ENST00000495899 VPS8Q8N3P4 1428 aa19.64■□□□□ 0.73
MRPL55-233ENST00000495899 CFAP74Q9C0B2 1584 aa19.62■□□□□ 0.73
MRPL55-233ENST00000495899 RAPGEF3O95398 923 aa19.62■□□□□ 0.73
MRPL55-233ENST00000495899 MTUS2Q5JR59 1369 aa19.6■□□□□ 0.73
MRPL55-233ENST00000495899 DENND4BO75064 1496 aaPredicted RBP19.6■□□□□ 0.73
MRPL55-233ENST00000495899 HOXD11P31277 338 aaPredicted RBP19.57■□□□□ 0.72
MRPL55-233ENST00000495899 SCAPERQ9BY12 1400 aa19.56■□□□□ 0.72
MRPL55-233ENST00000495899 MYO5CQ9NQX4 1742 aa19.56■□□□□ 0.72
MRPL55-233ENST00000495899 ADGRL1O94910 1474 aa19.55■□□□□ 0.72
MRPL55-233ENST00000495899 ARHGAP5Q13017 1502 aa19.55■□□□□ 0.72
MRPL55-233ENST00000495899 EHBP1L1Q8N3D4 1523 aa19.51■□□□□ 0.71
MRPL55-233ENST00000495899 CCNB3Q8WWL7 1395 aa19.51■□□□□ 0.71
MRPL55-233ENST00000495899 MAP3K1Q13233 1512 aa19.51■□□□□ 0.71
MRPL55-233ENST00000495899 GPATCH8Q9UKJ3 1502 aaKnown RBP19.51■□□□□ 0.71
MRPL55-233ENST00000495899 FRMPD1Q5SYB0 1578 aa19.5■□□□□ 0.71
MRPL55-233ENST00000495899 KDM4FA0A1W2PPD8 638 aa19.5■□□□□ 0.71
MRPL55-233ENST00000495899 POGZQ7Z3K3 1410 aa19.5■□□□□ 0.71
MRPL55-233ENST00000495899 TIAM1Q13009 1591 aa19.49■□□□□ 0.71
MRPL55-233ENST00000495899 MAGI2Q86UL8 1455 aa19.48■□□□□ 0.71
MRPL55-233ENST00000495899 PREX2Q70Z35 1606 aa19.48■□□□□ 0.71
MRPL55-233ENST00000495899 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
MRPL55-233ENST00000495899 RICTORQ6R327 1708 aa19.47■□□□□ 0.71
MRPL55-233ENST00000495899 CDC42BPBQ9Y5S2 1711 aa19.47■□□□□ 0.71
MRPL55-233ENST00000495899 ZMYM4Q5VZL5 1548 aa19.46■□□□□ 0.71
MRPL55-233ENST00000495899 APLP2Q06481 763 aa19.46■□□□□ 0.71
MRPL55-233ENST00000495899 ZNF518AQ6AHZ1 1483 aa19.46■□□□□ 0.71
MRPL55-233ENST00000495899 LRRC9Q6ZRR7 1453 aa19.45■□□□□ 0.7
MRPL55-233ENST00000495899 AFAP1Q8N556 730 aa19.44■□□□□ 0.7
MRPL55-233ENST00000495899 ZNF777Q9ULD5 760 aaPredicted RBP19.44■□□□□ 0.7
MRPL55-233ENST00000495899 CDC42BPAQ5VT25 1732 aa19.43■□□□□ 0.7
MRPL55-233ENST00000495899 KANK4Q5T7N3 995 aaPredicted RBP19.42■□□□□ 0.7
MRPL55-233ENST00000495899 KIAA1107Q9UPP5 1409 aa19.42■□□□□ 0.7
MRPL55-233ENST00000495899 NCOA2Q15596 1464 aa19.41■□□□□ 0.7
MRPL55-233ENST00000495899 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
MRPL55-233ENST00000495899 ABCC1P33527 1531 aa19.41■□□□□ 0.7
MRPL55-233ENST00000495899 ZFYVE16Q7Z3T8 1539 aa19.4■□□□□ 0.7
MRPL55-233ENST00000495899 ARHGEF12Q9NZN5 1544 aa19.4■□□□□ 0.7
MRPL55-233ENST00000495899 TRAPPC8Q9Y2L5 1435 aa19.39■□□□□ 0.69
MRPL55-233ENST00000495899 ARHGEF40Q8TER5 1519 aa19.39■□□□□ 0.69
MRPL55-233ENST00000495899 KDM5CP41229 1560 aa19.38■□□□□ 0.69
MRPL55-233ENST00000495899 SUPT6HQ7KZ85 1726 aaKnown RBP19.38■□□□□ 0.69
MRPL55-233ENST00000495899 YEATS2Q9ULM3 1422 aa19.38■□□□□ 0.69
MRPL55-233ENST00000495899 MLH3Q9UHC1 1453 aa19.37■□□□□ 0.69
MRPL55-233ENST00000495899 ARID4BQ4LE39 1312 aaPredicted RBP19.37■□□□□ 0.69
MRPL55-233ENST00000495899 HNRNPMP52272 730 aaKnown RBP eCLIP19.37■□□□□ 0.69
MRPL55-233ENST00000495899 SAMD9LQ8IVG5 1584 aa19.36■□□□□ 0.69
MRPL55-233ENST00000495899 ATP10AO60312 1499 aa19.35■□□□□ 0.69
MRPL55-233ENST00000495899 MYT1LQ9UL68 1186 aa19.35■□□□□ 0.69
MRPL55-233ENST00000495899 ITSN2Q9NZM3 1697 aa19.34■□□□□ 0.69
MRPL55-233ENST00000495899 ZNF644Q9H582 1327 aaPredicted RBP19.34■□□□□ 0.69
MRPL55-233ENST00000495899 RSPH4AQ5TD94 716 aa19.33■□□□□ 0.68
MRPL55-233ENST00000495899 SYCP2Q9BX26 1530 aa19.32■□□□□ 0.68
MRPL55-233ENST00000495899 SPAG9O60271 1321 aaKnown RBP19.31■□□□□ 0.68
MRPL55-233ENST00000495899 C9orf84Q5VXU9 1444 aa19.31■□□□□ 0.68
MRPL55-233ENST00000495899 HECW2Q9P2P5 1572 aa19.31■□□□□ 0.68
MRPL55-233ENST00000495899 MBD5Q9P267 1494 aa19.29■□□□□ 0.68
MRPL55-233ENST00000495899 MIA2Q96PC5 1412 aa19.28■□□□□ 0.68
MRPL55-233ENST00000495899 MYOM3Q5VTT5 1437 aa19.27■□□□□ 0.68
MRPL55-233ENST00000495899 REREQ9P2R6 1566 aa19.25■□□□□ 0.67
MRPL55-233ENST00000495899 CAMSAP2Q08AD1 1489 aa19.25■□□□□ 0.67
MRPL55-233ENST00000495899 ADAMTSL3P82987 1691 aa19.24■□□□□ 0.67
MRPL55-233ENST00000495899 DIP2CQ9Y2E4 1556 aa19.24■□□□□ 0.67
MRPL55-233ENST00000495899 RTEL1-TNFRSF6BF6WH68 1400 aa19.24■□□□□ 0.67
MRPL55-233ENST00000495899 BCORL1Q5H9F3 1711 aa19.23■□□□□ 0.67
MRPL55-233ENST00000495899 KIDINS220Q9ULH0 1771 aa19.22■□□□□ 0.67
MRPL55-233ENST00000495899 TSPY4P0CV99 314 aa19.21■□□□□ 0.67
MRPL55-233ENST00000495899 TSPY10P0CW01 314 aa19.21■□□□□ 0.67
MRPL55-233ENST00000495899 ABCA6Q8N139 1617 aa19.21■□□□□ 0.67
MRPL55-233ENST00000495899 CCDC141Q6ZP82 1450 aa19.21■□□□□ 0.67
MRPL55-233ENST00000495899 AGLP35573 1532 aa19.2■□□□□ 0.66
MRPL55-233ENST00000495899 ATP7AQ04656 1500 aa19.2■□□□□ 0.66
MRPL55-233ENST00000495899 MLECQ14165 292 aa19.2■□□□□ 0.66
MRPL55-233ENST00000495899 PTPRMP28827 1452 aa19.19■□□□□ 0.66
MRPL55-233ENST00000495899 INO80Q9ULG1 1556 aaPredicted RBP19.19■□□□□ 0.66
MRPL55-233ENST00000495899 SIGLEC1Q9BZZ2 1709 aa19.18■□□□□ 0.66
MRPL55-233ENST00000495899 ARHGEF5Q12774 1597 aa19.18■□□□□ 0.66
MRPL55-233ENST00000495899 A2MP01023 1474 aa19.16■□□□□ 0.66
MRPL55-233ENST00000495899 FGD6Q6ZV73 1430 aa19.15■□□□□ 0.66
MRPL55-233ENST00000495899 MADDQ8WXG6 1647 aa19.14■□□□□ 0.66
MRPL55-233ENST00000495899 DHX29Q7Z478 1369 aaKnown RBP19.12■□□□□ 0.65
MRPL55-233ENST00000495899 TCOF1Q13428 1488 aaKnown RBP19.11■□□□□ 0.65
MRPL55-233ENST00000495899 ESF1Q9H501 851 aaKnown RBP19.11■□□□□ 0.65
MRPL55-233ENST00000495899 PLXNC1O60486 1568 aa19.1■□□□□ 0.65
MRPL55-233ENST00000495899 PTPN23Q9H3S7 1636 aa19.09■□□□□ 0.65
MRPL55-233ENST00000495899 ADGBQ8N7X0 1667 aa19.08■□□□□ 0.64
MRPL55-233ENST00000495899 MAST1Q9Y2H9 1570 aa19.07■□□□□ 0.64
MRPL55-233ENST00000495899 RIMS1Q86UR5 1692 aaKnown RBP19.07■□□□□ 0.64
MRPL55-233ENST00000495899 ABCC5O15440 1437 aa19.07■□□□□ 0.64
MRPL55-233ENST00000495899 CNTLNQ9NXG0 1405 aa19.06■□□□□ 0.64
MRPL55-233ENST00000495899 SHANK2Q9UPX8 1470 aa19.04■□□□□ 0.64
MRPL55-233ENST00000495899 FER1L4A9Z1Z3 1794 aa19.04■□□□□ 0.64
MRPL55-233ENST00000495899 GGT6Q6P531 493 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms