RNA–Protein interactions for RNA: ENST00000495491.5

HCLS1-211, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 2

Gene HCLS1, Length 1,219 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-211ENST00000495491 KIF14Q15058 1648 aa21■□□□□ 0.95
HCLS1-211ENST00000495491 YEATS2Q9ULM3 1422 aa21■□□□□ 0.95
HCLS1-211ENST00000495491 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
HCLS1-211ENST00000495491 ATP1B4Q9UN42 357 aaPredicted RBP20.99■□□□□ 0.95
HCLS1-211ENST00000495491 ARID4BQ4LE39 1312 aaPredicted RBP20.99■□□□□ 0.95
HCLS1-211ENST00000495491 ZNF518AQ6AHZ1 1483 aa20.96■□□□□ 0.95
HCLS1-211ENST00000495491 MYO5CQ9NQX4 1742 aa20.96■□□□□ 0.95
HCLS1-211ENST00000495491 FYCO1Q9BQS8 1478 aa20.95■□□□□ 0.94
HCLS1-211ENST00000495491 MADDQ8WXG6 1647 aa20.95■□□□□ 0.94
HCLS1-211ENST00000495491 ATP10AO60312 1499 aa20.94■□□□□ 0.94
HCLS1-211ENST00000495491 KDM5CP41229 1560 aa20.93■□□□□ 0.94
HCLS1-211ENST00000495491 PCF11O94913 1555 aaKnown RBP20.92■□□□□ 0.94
HCLS1-211ENST00000495491 LRRIQ1Q96JM4 1722 aa20.92■□□□□ 0.94
HCLS1-211ENST00000495491 ARHGAP5Q13017 1502 aa20.91■□□□□ 0.94
HCLS1-211ENST00000495491 C9orf84Q5VXU9 1444 aa20.91■□□□□ 0.94
HCLS1-211ENST00000495491 MLH3Q9UHC1 1453 aa20.89■□□□□ 0.94
HCLS1-211ENST00000495491 LMTK3Q96Q04 1460 aa20.88■□□□□ 0.93
HCLS1-211ENST00000495491 REREQ9P2R6 1566 aa20.88■□□□□ 0.93
HCLS1-211ENST00000495491 ARHGEF12Q9NZN5 1544 aa20.88■□□□□ 0.93
HCLS1-211ENST00000495491 SIGLEC1Q9BZZ2 1709 aa20.87■□□□□ 0.93
HCLS1-211ENST00000495491 AFAP1Q8N556 730 aa20.86■□□□□ 0.93
HCLS1-211ENST00000495491 PREX2Q70Z35 1606 aa20.85■□□□□ 0.93
HCLS1-211ENST00000495491 ABCC1P33527 1531 aa20.83■□□□□ 0.93
HCLS1-211ENST00000495491 CDC42BPBQ9Y5S2 1711 aa20.83■□□□□ 0.92
HCLS1-211ENST00000495491 RIMS1Q86UR5 1692 aaKnown RBP20.82■□□□□ 0.92
HCLS1-211ENST00000495491 TRAPPC8Q9Y2L5 1435 aa20.8■□□□□ 0.92
HCLS1-211ENST00000495491 AGLP35573 1532 aa20.8■□□□□ 0.92
HCLS1-211ENST00000495491 GPATCH8Q9UKJ3 1502 aaKnown RBP20.79■□□□□ 0.92
HCLS1-211ENST00000495491 KIAA1107Q9UPP5 1409 aa20.78■□□□□ 0.92
HCLS1-211ENST00000495491 DIP2CQ9Y2E4 1556 aa20.78■□□□□ 0.92
HCLS1-211ENST00000495491 MLECQ14165 292 aa20.74■□□□□ 0.91
HCLS1-211ENST00000495491 CDC42BPAQ5VT25 1732 aa20.74■□□□□ 0.91
HCLS1-211ENST00000495491 FER1L4A9Z1Z3 1794 aa20.74■□□□□ 0.91
HCLS1-211ENST00000495491 PLEKHH2Q8IVE3 1493 aa20.74■□□□□ 0.91
HCLS1-211ENST00000495491 ITSN2Q9NZM3 1697 aa20.73■□□□□ 0.91
HCLS1-211ENST00000495491 ABCA6Q8N139 1617 aa20.71■□□□□ 0.91
HCLS1-211ENST00000495491 FBXO41Q8TF61 875 aa20.71■□□□□ 0.91
HCLS1-211ENST00000495491 SAMD9LQ8IVG5 1584 aa20.69■□□□□ 0.9
HCLS1-211ENST00000495491 MTUS2Q5JR59 1369 aa20.69■□□□□ 0.9
HCLS1-211ENST00000495491 KIDINS220Q9ULH0 1771 aa20.69■□□□□ 0.9
HCLS1-211ENST00000495491 CEP162Q5TB80 1403 aa20.69■□□□□ 0.9
HCLS1-211ENST00000495491 CFDP1Q9UEE9 299 aaPredicted RBP20.68■□□□□ 0.9
HCLS1-211ENST00000495491 CCNB3Q8WWL7 1395 aa20.68■□□□□ 0.9
HCLS1-211ENST00000495491 CNTLNQ9NXG0 1405 aa20.68■□□□□ 0.9
HCLS1-211ENST00000495491 SETD1BQ9UPS6 1966 aaKnown RBP20.67■□□□□ 0.9
HCLS1-211ENST00000495491 SYCP2Q9BX26 1530 aa20.65■□□□□ 0.9
HCLS1-211ENST00000495491 SPAG9O60271 1321 aaKnown RBP20.65■□□□□ 0.9
HCLS1-211ENST00000495491 HSPA2P54652 639 aa20.65■□□□□ 0.9
HCLS1-211ENST00000495491 MYT1LQ9UL68 1186 aa20.65■□□□□ 0.9
HCLS1-211ENST00000495491 EHBP1L1Q8N3D4 1523 aa20.64■□□□□ 0.9
HCLS1-211ENST00000495491 CEBPAP49715 358 aaPredicted RBP20.62■□□□□ 0.89
HCLS1-211ENST00000495491 HNRNPMP52272 730 aaKnown RBP eCLIP20.62■□□□□ 0.89
HCLS1-211ENST00000495491 PREX1Q8TCU6 1659 aa20.61■□□□□ 0.89
HCLS1-211ENST00000495491 ZNF777Q9ULD5 760 aaPredicted RBP20.61■□□□□ 0.89
HCLS1-211ENST00000495491 MBD5Q9P267 1494 aa20.61■□□□□ 0.89
HCLS1-211ENST00000495491 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
HCLS1-211ENST00000495491 UHRF1BP1Q6BDS2 1440 aa20.6■□□□□ 0.89
HCLS1-211ENST00000495491 PLXNC1O60486 1568 aa20.59■□□□□ 0.89
HCLS1-211ENST00000495491 INO80Q9ULG1 1556 aaPredicted RBP20.59■□□□□ 0.89
HCLS1-211ENST00000495491 ATP7AQ04656 1500 aa20.59■□□□□ 0.89
HCLS1-211ENST00000495491 RTEL1-TNFRSF6BF6WH68 1400 aa20.59■□□□□ 0.89
HCLS1-211ENST00000495491 NPATQ14207 1427 aa20.59■□□□□ 0.89
HCLS1-211ENST00000495491 TIAM1Q13009 1591 aa20.58■□□□□ 0.88
HCLS1-211ENST00000495491 ESF1Q9H501 851 aaKnown RBP20.57■□□□□ 0.88
HCLS1-211ENST00000495491 DMRT2Q9Y5R5 561 aa20.57■□□□□ 0.88
HCLS1-211ENST00000495491 A2MP01023 1474 aa20.56■□□□□ 0.88
HCLS1-211ENST00000495491 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
HCLS1-211ENST00000495491 RSPH4AQ5TD94 716 aa20.55■□□□□ 0.88
HCLS1-211ENST00000495491 C3P01024 1663 aa20.53■□□□□ 0.88
HCLS1-211ENST00000495491 MROH2AA6NES4 1674 aa20.52■□□□□ 0.88
HCLS1-211ENST00000495491 VPS8Q8N3P4 1428 aa20.52■□□□□ 0.87
HCLS1-211ENST00000495491 ZNF644Q9H582 1327 aaPredicted RBP20.52■□□□□ 0.87
HCLS1-211ENST00000495491 NCOA2Q15596 1464 aa20.51■□□□□ 0.87
HCLS1-211ENST00000495491 ZMYM3Q14202 1370 aa20.51■□□□□ 0.87
HCLS1-211ENST00000495491 MAP3K1Q13233 1512 aa20.5■□□□□ 0.87
HCLS1-211ENST00000495491 PTPRTO14522 1441 aa20.5■□□□□ 0.87
HCLS1-211ENST00000495491 DHX29Q7Z478 1369 aaKnown RBP20.48■□□□□ 0.87
HCLS1-211ENST00000495491 CERKQ8TCT0 537 aa20.47■□□□□ 0.87
HCLS1-211ENST00000495491 CCDC141Q6ZP82 1450 aa20.46■□□□□ 0.87
HCLS1-211ENST00000495491 STRCQ7RTU9 1775 aa20.46■□□□□ 0.87
HCLS1-211ENST00000495491 ADGBQ8N7X0 1667 aa20.45■□□□□ 0.86
HCLS1-211ENST00000495491 SUPT6HQ7KZ85 1726 aaKnown RBP20.45■□□□□ 0.86
HCLS1-211ENST00000495491 FAM135AQ9P2D6 1515 aa20.45■□□□□ 0.86
HCLS1-211ENST00000495491 NCOA1Q15788 1441 aa20.44■□□□□ 0.86
HCLS1-211ENST00000495491 LRRC9Q6ZRR7 1453 aa20.44■□□□□ 0.86
HCLS1-211ENST00000495491 PTPRKQ15262 1439 aa20.44■□□□□ 0.86
HCLS1-211ENST00000495491 CAMSAP2Q08AD1 1489 aa20.43■□□□□ 0.86
HCLS1-211ENST00000495491 ARHGEF5Q12774 1597 aa20.42■□□□□ 0.86
HCLS1-211ENST00000495491 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
HCLS1-211ENST00000495491 GGT6Q6P531 493 aa20.39■□□□□ 0.85
HCLS1-211ENST00000495491 PLA2R1Q13018 1463 aa20.38■□□□□ 0.85
HCLS1-211ENST00000495491 MIA2Q96PC5 1412 aa20.38■□□□□ 0.85
HCLS1-211ENST00000495491 TSPY4P0CV99 314 aa20.35■□□□□ 0.85
HCLS1-211ENST00000495491 TSPY10P0CW01 314 aa20.35■□□□□ 0.85
HCLS1-211ENST00000495491 CLTCQ00610 1675 aaKnown RBP20.35■□□□□ 0.85
HCLS1-211ENST00000495491 PKD2Q13563 968 aa20.34■□□□□ 0.85
HCLS1-211ENST00000495491 ZNF142P52746 1687 aaPredicted RBP20.34■□□□□ 0.85
HCLS1-211ENST00000495491 TCOF1Q13428 1488 aaKnown RBP20.33■□□□□ 0.85
HCLS1-211ENST00000495491 IQSEC2Q5JU85 1478 aa20.33■□□□□ 0.85
HCLS1-211ENST00000495491 ILDR2Q71H61 639 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms