RNA–Protein interactions for RNA: ENST00000495473.1

RGPD5-212, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 3

Gene RGPD5, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-212ENST00000495473 COLQQ9Y215 455 aaPredicted RBP8.42□□□□□ -1.06
RGPD5-212ENST00000495473 EIF4G1Q04637 1599 aaKnown RBP8.41□□□□□ -1.06
RGPD5-212ENST00000495473 CUX2O14529 1486 aa8.41□□□□□ -1.06
RGPD5-212ENST00000495473 L3MBTL3Q96JM7 780 aaPredicted RBP8.41□□□□□ -1.06
RGPD5-212ENST00000495473 CADPS2Q86UW7 1296 aa8.4□□□□□ -1.06
RGPD5-212ENST00000495473 WDR70Q9NW82 654 aa8.39□□□□□ -1.07
RGPD5-212ENST00000495473 BOLA1Q9Y3E2 137 aa8.38□□□□□ -1.07
RGPD5-212ENST00000495473 POTEFA5A3E0 1075 aa8.37□□□□□ -1.07
RGPD5-212ENST00000495473 PRKCSHP14314 528 aaPredicted RBP8.37□□□□□ -1.07
RGPD5-212ENST00000495473 PDE4AP27815 886 aa8.37□□□□□ -1.07
RGPD5-212ENST00000495473 MICALL2Q8IY33 904 aa8.36□□□□□ -1.07
RGPD5-212ENST00000495473 LARP6Q9BRS8 491 aaKnown RBP8.34□□□□□ -1.07
RGPD5-212ENST00000495473 TMEM121BQ9BXQ6 578 aaPredicted RBP8.33□□□□□ -1.08
RGPD5-212ENST00000495473 TMC2Q8TDI7 906 aa8.3□□□□□ -1.08
RGPD5-212ENST00000495473 NCKAP5LQ9HCH0 1330 aa8.29□□□□□ -1.08
RGPD5-212ENST00000495473 CRISPLD2Q9H0B8 497 aa8.29□□□□□ -1.08
RGPD5-212ENST00000495473 GPHNQ9NQX3 736 aaPredicted RBP8.29□□□□□ -1.08
RGPD5-212ENST00000495473 ERCC6Q03468 1493 aa8.29□□□□□ -1.08
RGPD5-212ENST00000495473 C3orf67Q6ZVT6 689 aa8.27□□□□□ -1.09
RGPD5-212ENST00000495473 DDX27Q96GQ7 796 aaKnown RBP8.27□□□□□ -1.09
RGPD5-212ENST00000495473 C2orf72A6NCS6 295 aa8.25□□□□□ -1.09
RGPD5-212ENST00000495473 E2F4Q16254 413 aa8.25□□□□□ -1.09
RGPD5-212ENST00000495473 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.25□□□□□ -1.09
RGPD5-212ENST00000495473 MFSD10Q14728 455 aa8.24□□□□□ -1.09
RGPD5-212ENST00000495473 SCRIBQ14160 1630 aa8.23□□□□□ -1.09
RGPD5-212ENST00000495473 POTEB2H3BUK9 544 aa8.23□□□□□ -1.09
RGPD5-212ENST00000495473 P3H3Q8IVL6 736 aa8.23□□□□□ -1.09
RGPD5-212ENST00000495473 FOXK1P85037 733 aa8.22□□□□□ -1.09
RGPD5-212ENST00000495473 DSG2Q14126 1118 aa8.22□□□□□ -1.09
RGPD5-212ENST00000495473 PPP1R15BQ5SWA1 713 aa8.22□□□□□ -1.09
RGPD5-212ENST00000495473 TMEM92Q6UXU6 159 aa8.22□□□□□ -1.09
RGPD5-212ENST00000495473 BCANQ96GW7 911 aa8.22□□□□□ -1.09
RGPD5-212ENST00000495473 KIF3CO14782 793 aa8.21□□□□□ -1.1
RGPD5-212ENST00000495473 POTEJP0CG39 1038 aa8.21□□□□□ -1.1
RGPD5-212ENST00000495473 PLPP6Q8IY26 295 aa8.21□□□□□ -1.1
RGPD5-212ENST00000495473 DCAF1Q9Y4B6 1507 aa8.2□□□□□ -1.1
RGPD5-212ENST00000495473 MAMSTRQ6ZN01 415 aa8.2□□□□□ -1.1
RGPD5-212ENST00000495473 SCUBE2Q9NQ36 999 aa8.19□□□□□ -1.1
RGPD5-212ENST00000495473 NBR1Q14596 966 aa8.18□□□□□ -1.1
RGPD5-212ENST00000495473 KCNV2Q8TDN2 545 aa8.18□□□□□ -1.1
RGPD5-212ENST00000495473 ARHGEF1Q92888 912 aaKnown RBP8.17□□□□□ -1.1
RGPD5-212ENST00000495473 CAMK2BQ13554 666 aa8.16□□□□□ -1.1
RGPD5-212ENST00000495473 DAXXQ9UER7 740 aaPredicted RBP8.16□□□□□ -1.1
RGPD5-212ENST00000495473 SLAIN1Q8ND83 568 aa8.15□□□□□ -1.1
RGPD5-212ENST00000495473 LHX8Q68G74 356 aa8.13□□□□□ -1.11
RGPD5-212ENST00000495473 MAP3K9P80192 1104 aa8.12□□□□□ -1.11
RGPD5-212ENST00000495473 EMILIN3Q9NT22 766 aa8.12□□□□□ -1.11
RGPD5-212ENST00000495473 ARIH1Q9Y4X5 557 aaPredicted RBP8.11□□□□□ -1.11
RGPD5-212ENST00000495473 ZCCHC6Q5VYS8 1495 aaKnown RBP8.11□□□□□ -1.11
RGPD5-212ENST00000495473 TBC1D12O60347 775 aa8.1□□□□□ -1.11
RGPD5-212ENST00000495473 UPF1Q92900 1129 aaKnown RBP eCLIP8.1□□□□□ -1.11
RGPD5-212ENST00000495473 DPYSL4O14531 572 aa8.09□□□□□ -1.11
RGPD5-212ENST00000495473 OTUD5Q96G74 571 aa8.08□□□□□ -1.12
RGPD5-212ENST00000495473 NCAPD3P42695 1498 aa8.07□□□□□ -1.12
RGPD5-212ENST00000495473 SLC34A2O95436 690 aa8.07□□□□□ -1.12
RGPD5-212ENST00000495473 TPRNQ4KMQ1 711 aa8.07□□□□□ -1.12
RGPD5-212ENST00000495473 OXER1Q8TDS5 423 aa8.07□□□□□ -1.12
RGPD5-212ENST00000495473 SPDYE16A6NNV3 312 aaPredicted RBP8.06□□□□□ -1.12
RGPD5-212ENST00000495473 SEMA3EO15041 775 aa8.06□□□□□ -1.12
RGPD5-212ENST00000495473 MYT1Q01538 1121 aa8.06□□□□□ -1.12
RGPD5-212ENST00000495473 PTCD2Q8WV60 388 aaKnown RBP8.06□□□□□ -1.12
RGPD5-212ENST00000495473 DOK7Q18PE1 504 aa8.05□□□□□ -1.12
RGPD5-212ENST00000495473 SNPHO15079 494 aa8.04□□□□□ -1.12
RGPD5-212ENST00000495473 TULP1O00294 542 aaPredicted RBP8.03□□□□□ -1.12
RGPD5-212ENST00000495473 RIMBP2O15034 1052 aa8.03□□□□□ -1.12
RGPD5-212ENST00000495473 SMYD5Q6GMV2 418 aa8.03□□□□□ -1.12
RGPD5-212ENST00000495473 ZNF710Q8N1W2 664 aa8.03□□□□□ -1.12
RGPD5-212ENST00000495473 EVI5O60447 810 aa8.02□□□□□ -1.13
RGPD5-212ENST00000495473 TIMELESSQ9UNS1 1208 aa8.02□□□□□ -1.13
RGPD5-212ENST00000495473 PCDHGA4Q9Y5G9 962 aa8.02□□□□□ -1.13
RGPD5-212ENST00000495473 TESPA1A2RU30 521 aaPredicted RBP8.01□□□□□ -1.13
RGPD5-212ENST00000495473 HOXB3P14651 431 aaPredicted RBP8.01□□□□□ -1.13
RGPD5-212ENST00000495473 PDIA6Q15084 440 aa8□□□□□ -1.13
RGPD5-212ENST00000495473 ARSIQ5FYB1 569 aa8□□□□□ -1.13
RGPD5-212ENST00000495473 ZNF316A6NFI3 1004 aaPredicted RBP7.99□□□□□ -1.13
RGPD5-212ENST00000495473 GRXCR2A6NFK2 248 aa7.98□□□□□ -1.13
RGPD5-212ENST00000495473 MLLT3P42568 568 aaPredicted RBP7.98□□□□□ -1.13
RGPD5-212ENST00000495473 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.98□□□□□ -1.13
RGPD5-212ENST00000495473 ANO8Q9HCE9 1232 aaPredicted RBP7.98□□□□□ -1.13
RGPD5-212ENST00000495473 ZSWIM6Q9HCJ5 1215 aa7.98□□□□□ -1.13
RGPD5-212ENST00000495473 PDS5BQ9NTI5 1447 aa7.97□□□□□ -1.13
RGPD5-212ENST00000495473 NESP48681 1621 aa7.97□□□□□ -1.13
RGPD5-212ENST00000495473 THOC2Q8NI27 1593 aaKnown RBP7.97□□□□□ -1.13
RGPD5-212ENST00000495473 PTGER2P43116 358 aa7.96□□□□□ -1.14
RGPD5-212ENST00000495473 GPR153Q6NV75 609 aa7.96□□□□□ -1.14
RGPD5-212ENST00000495473 DDX12PQ92771 950 aa7.96□□□□□ -1.14
RGPD5-212ENST00000495473 KHSRPQ92945 711 aaKnown RBP eCLIP7.96□□□□□ -1.14
RGPD5-212ENST00000495473 NUDT7P0C024 238 aa7.95□□□□□ -1.14
RGPD5-212ENST00000495473 ARXQ96QS3 562 aa7.95□□□□□ -1.14
RGPD5-212ENST00000495473 ATAD2BQ9ULI0 1458 aa7.94□□□□□ -1.14
RGPD5-212ENST00000495473 SMARCA2P51531 1590 aa7.94□□□□□ -1.14
RGPD5-212ENST00000495473 LMOD2Q6P5Q4 547 aa7.94□□□□□ -1.14
RGPD5-212ENST00000495473 TTBK1Q5TCY1 1321 aaPredicted RBP7.94□□□□□ -1.14
RGPD5-212ENST00000495473 HMGXB3Q12766 1538 aa7.93□□□□□ -1.14
RGPD5-212ENST00000495473 LAMC3Q9Y6N6 1575 aa7.93□□□□□ -1.14
RGPD5-212ENST00000495473 KDM4FA0A1W2PPD8 638 aa7.92□□□□□ -1.14
RGPD5-212ENST00000495473 FAM163AQ96GL9 167 aaPredicted RBP7.92□□□□□ -1.14
RGPD5-212ENST00000495473 HOXB1P14653 301 aaPredicted RBP7.91□□□□□ -1.14
RGPD5-212ENST00000495473 RBM26Q5T8P6 1007 aaKnown RBP7.91□□□□□ -1.14
RGPD5-212ENST00000495473 PHF14O94880 888 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms