RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 ARHGAP5Q13017 1502 aa23.61■■□□□ 1.37
RAPGEF3-214ENST00000495465 MYO5CQ9NQX4 1742 aa23.6■■□□□ 1.37
RAPGEF3-214ENST00000495465 ZMYM4Q5VZL5 1548 aa23.59■■□□□ 1.37
RAPGEF3-214ENST00000495465 ZFYVE16Q7Z3T8 1539 aa23.59■■□□□ 1.37
RAPGEF3-214ENST00000495465 MAGI2Q86UL8 1455 aa23.58■■□□□ 1.37
RAPGEF3-214ENST00000495465 AFAP1Q8N556 730 aa23.58■■□□□ 1.37
RAPGEF3-214ENST00000495465 PTPRMP28827 1452 aa23.57■■□□□ 1.36
RAPGEF3-214ENST00000495465 ADAMTSL3P82987 1691 aa23.57■■□□□ 1.36
RAPGEF3-214ENST00000495465 HECW2Q9P2P5 1572 aa23.56■■□□□ 1.36
RAPGEF3-214ENST00000495465 MLECQ14165 292 aa23.55■■□□□ 1.36
RAPGEF3-214ENST00000495465 MYT1LQ9UL68 1186 aa23.55■■□□□ 1.36
RAPGEF3-214ENST00000495465 BCORL1Q5H9F3 1711 aa23.54■■□□□ 1.36
RAPGEF3-214ENST00000495465 CEP162Q5TB80 1403 aa23.5■■□□□ 1.35
RAPGEF3-214ENST00000495465 ZNF518AQ6AHZ1 1483 aa23.5■■□□□ 1.35
RAPGEF3-214ENST00000495465 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
RAPGEF3-214ENST00000495465 PLPPR3Q6T4P5 718 aa23.5■■□□□ 1.35
RAPGEF3-214ENST00000495465 ZNF777Q9ULD5 760 aaPredicted RBP23.5■■□□□ 1.35
RAPGEF3-214ENST00000495465 MADDQ8WXG6 1647 aa23.5■■□□□ 1.35
RAPGEF3-214ENST00000495465 ATP10AO60312 1499 aa23.49■■□□□ 1.35
RAPGEF3-214ENST00000495465 CDC42BPBQ9Y5S2 1711 aa23.47■■□□□ 1.35
RAPGEF3-214ENST00000495465 C9orf84Q5VXU9 1444 aa23.45■■□□□ 1.34
RAPGEF3-214ENST00000495465 TRAPPC8Q9Y2L5 1435 aa23.45■■□□□ 1.34
RAPGEF3-214ENST00000495465 MTUS2Q5JR59 1369 aa23.45■■□□□ 1.34
RAPGEF3-214ENST00000495465 SIGLEC1Q9BZZ2 1709 aa23.45■■□□□ 1.34
RAPGEF3-214ENST00000495465 PREX2Q70Z35 1606 aa23.44■■□□□ 1.34
RAPGEF3-214ENST00000495465 ARHGEF12Q9NZN5 1544 aa23.44■■□□□ 1.34
RAPGEF3-214ENST00000495465 GPATCH8Q9UKJ3 1502 aaKnown RBP23.42■■□□□ 1.34
RAPGEF3-214ENST00000495465 KDM5CP41229 1560 aa23.41■■□□□ 1.34
RAPGEF3-214ENST00000495465 CFDP1Q9UEE9 299 aaPredicted RBP23.41■■□□□ 1.34
RAPGEF3-214ENST00000495465 RIMS1Q86UR5 1692 aaKnown RBP23.41■■□□□ 1.34
RAPGEF3-214ENST00000495465 ABCC1P33527 1531 aa23.4■■□□□ 1.34
RAPGEF3-214ENST00000495465 CCNB3Q8WWL7 1395 aa23.4■■□□□ 1.34
RAPGEF3-214ENST00000495465 HNRNPMP52272 730 aaKnown RBP eCLIP23.39■■□□□ 1.33
RAPGEF3-214ENST00000495465 CDC42BPAQ5VT25 1732 aa23.39■■□□□ 1.33
RAPGEF3-214ENST00000495465 MLH3Q9UHC1 1453 aa23.37■■□□□ 1.33
RAPGEF3-214ENST00000495465 ITSN2Q9NZM3 1697 aa23.33■■□□□ 1.33
RAPGEF3-214ENST00000495465 DIP2CQ9Y2E4 1556 aa23.33■■□□□ 1.33
RAPGEF3-214ENST00000495465 SAMD9LQ8IVG5 1584 aa23.32■■□□□ 1.32
RAPGEF3-214ENST00000495465 SPAG9O60271 1321 aaKnown RBP23.32■■□□□ 1.32
RAPGEF3-214ENST00000495465 CEBPAP49715 358 aaPredicted RBP23.31■■□□□ 1.32
RAPGEF3-214ENST00000495465 SYCP2Q9BX26 1530 aa23.31■■□□□ 1.32
RAPGEF3-214ENST00000495465 ABCA6Q8N139 1617 aa23.3■■□□□ 1.32
RAPGEF3-214ENST00000495465 ZNF644Q9H582 1327 aaPredicted RBP23.3■■□□□ 1.32
RAPGEF3-214ENST00000495465 LMTK3Q96Q04 1460 aa23.3■■□□□ 1.32
RAPGEF3-214ENST00000495465 HSPA2P54652 639 aa23.29■■□□□ 1.32
RAPGEF3-214ENST00000495465 KIAA1107Q9UPP5 1409 aa23.29■■□□□ 1.32
RAPGEF3-214ENST00000495465 EHBP1L1Q8N3D4 1523 aa23.28■■□□□ 1.32
RAPGEF3-214ENST00000495465 FER1L4A9Z1Z3 1794 aa23.28■■□□□ 1.32
RAPGEF3-214ENST00000495465 PLEKHH2Q8IVE3 1493 aa23.27■■□□□ 1.32
RAPGEF3-214ENST00000495465 ILDR1Q86SU0 546 aaPredicted RBP23.26■■□□□ 1.31
RAPGEF3-214ENST00000495465 ESF1Q9H501 851 aaKnown RBP23.26■■□□□ 1.31
RAPGEF3-214ENST00000495465 REREQ9P2R6 1566 aa23.25■■□□□ 1.31
RAPGEF3-214ENST00000495465 KIDINS220Q9ULH0 1771 aa23.24■■□□□ 1.31
RAPGEF3-214ENST00000495465 VPS8Q8N3P4 1428 aa23.23■■□□□ 1.31
RAPGEF3-214ENST00000495465 TIAM1Q13009 1591 aa23.23■■□□□ 1.31
RAPGEF3-214ENST00000495465 AGLP35573 1532 aa23.22■■□□□ 1.31
RAPGEF3-214ENST00000495465 NCOA2Q15596 1464 aa23.19■■□□□ 1.3
RAPGEF3-214ENST00000495465 ATP7AQ04656 1500 aa23.17■■□□□ 1.3
RAPGEF3-214ENST00000495465 MBD5Q9P267 1494 aa23.16■■□□□ 1.3
RAPGEF3-214ENST00000495465 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
RAPGEF3-214ENST00000495465 A2MP01023 1474 aa23.13■■□□□ 1.29
RAPGEF3-214ENST00000495465 SUPT6HQ7KZ85 1726 aaKnown RBP23.13■■□□□ 1.29
RAPGEF3-214ENST00000495465 LRRC9Q6ZRR7 1453 aa23.12■■□□□ 1.29
RAPGEF3-214ENST00000495465 GGT6Q6P531 493 aa23.12■■□□□ 1.29
RAPGEF3-214ENST00000495465 INO80Q9ULG1 1556 aaPredicted RBP23.11■■□□□ 1.29
RAPGEF3-214ENST00000495465 CNTLNQ9NXG0 1405 aa23.09■■□□□ 1.29
RAPGEF3-214ENST00000495465 UHRF1BP1Q6BDS2 1440 aa23.08■■□□□ 1.29
RAPGEF3-214ENST00000495465 CAMSAP2Q08AD1 1489 aa23.08■■□□□ 1.29
RAPGEF3-214ENST00000495465 RSPH4AQ5TD94 716 aa23.07■■□□□ 1.28
RAPGEF3-214ENST00000495465 RTEL1-TNFRSF6BF6WH68 1400 aa23.07■■□□□ 1.28
RAPGEF3-214ENST00000495465 ZMYM3Q14202 1370 aa23.06■■□□□ 1.28
RAPGEF3-214ENST00000495465 CCDC141Q6ZP82 1450 aa23.05■■□□□ 1.28
RAPGEF3-214ENST00000495465 APLP2Q06481 763 aa23.05■■□□□ 1.28
RAPGEF3-214ENST00000495465 C3P01024 1663 aa23.05■■□□□ 1.28
RAPGEF3-214ENST00000495465 PREX1Q8TCU6 1659 aa23.05■■□□□ 1.28
RAPGEF3-214ENST00000495465 PLXNC1O60486 1568 aa23.05■■□□□ 1.28
RAPGEF3-214ENST00000495465 TSPY4P0CV99 314 aa23.04■■□□□ 1.28
RAPGEF3-214ENST00000495465 TSPY10P0CW01 314 aa23.04■■□□□ 1.28
RAPGEF3-214ENST00000495465 MAP3K1Q13233 1512 aa23.03■■□□□ 1.28
RAPGEF3-214ENST00000495465 DHX29Q7Z478 1369 aaKnown RBP23.03■■□□□ 1.28
RAPGEF3-214ENST00000495465 SETD1BQ9UPS6 1966 aaKnown RBP23.03■■□□□ 1.28
RAPGEF3-214ENST00000495465 KIF3BO15066 747 aa23■■□□□ 1.27
RAPGEF3-214ENST00000495465 PPP6R1Q9UPN7 881 aa23■■□□□ 1.27
RAPGEF3-214ENST00000495465 FBXO41Q8TF61 875 aa22.99■■□□□ 1.27
RAPGEF3-214ENST00000495465 ADGBQ8N7X0 1667 aa22.98■■□□□ 1.27
RAPGEF3-214ENST00000495465 DMRT2Q9Y5R5 561 aa22.96■■□□□ 1.27
RAPGEF3-214ENST00000495465 NPATQ14207 1427 aa22.96■■□□□ 1.27
RAPGEF3-214ENST00000495465 MYOM3Q5VTT5 1437 aa22.96■■□□□ 1.27
RAPGEF3-214ENST00000495465 CLTCQ00610 1675 aaKnown RBP22.94■■□□□ 1.26
RAPGEF3-214ENST00000495465 ARHGEF5Q12774 1597 aa22.94■■□□□ 1.26
RAPGEF3-214ENST00000495465 MROH2AA6NES4 1674 aa22.93■■□□□ 1.26
RAPGEF3-214ENST00000495465 MIA2Q96PC5 1412 aa22.93■■□□□ 1.26
RAPGEF3-214ENST00000495465 PTPRKQ15262 1439 aa22.91■■□□□ 1.26
RAPGEF3-214ENST00000495465 CERKQ8TCT0 537 aa22.9■■□□□ 1.26
RAPGEF3-214ENST00000495465 WASHC2CQ9Y4E1 1318 aa22.89■■□□□ 1.26
RAPGEF3-214ENST00000495465 STRCQ7RTU9 1775 aa22.88■■□□□ 1.25
RAPGEF3-214ENST00000495465 FBXO31Q5XUX0 539 aaPredicted RBP22.86■■□□□ 1.25
RAPGEF3-214ENST00000495465 NCOA1Q15788 1441 aa22.84■■□□□ 1.25
RAPGEF3-214ENST00000495465 NCKAP5LQ9HCH0 1330 aa22.83■■□□□ 1.25
RAPGEF3-214ENST00000495465 PTPRTO14522 1441 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms