RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 COL17A1Q9UMD9 1497 aaPredicted RBP17.31■□□□□ 0.36
KDM1A-205ENST00000494920 APLP2Q06481 763 aa17.29■□□□□ 0.36
KDM1A-205ENST00000494920 ARHGAP5Q13017 1502 aa17.29■□□□□ 0.36
KDM1A-205ENST00000494920 PHLDB1Q86UU1 1377 aa17.28■□□□□ 0.36
KDM1A-205ENST00000494920 SAMD9LQ8IVG5 1584 aa17.28■□□□□ 0.36
KDM1A-205ENST00000494920 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
KDM1A-205ENST00000494920 ABCC1P33527 1531 aa17.27■□□□□ 0.36
KDM1A-205ENST00000494920 KDM6BO15054 1643 aa17.27■□□□□ 0.36
KDM1A-205ENST00000494920 AKNAQ7Z591 1439 aa17.27■□□□□ 0.35
KDM1A-205ENST00000494920 FRMPD1Q5SYB0 1578 aa17.27■□□□□ 0.35
KDM1A-205ENST00000494920 RICTORQ6R327 1708 aa17.26■□□□□ 0.35
KDM1A-205ENST00000494920 MYOM3Q5VTT5 1437 aa17.25■□□□□ 0.35
KDM1A-205ENST00000494920 ARHGEF12Q9NZN5 1544 aa17.23■□□□□ 0.35
KDM1A-205ENST00000494920 EFCAB2Q5VUJ9 269 aa17.23■□□□□ 0.35
KDM1A-205ENST00000494920 ADGRL1O94910 1474 aa17.23■□□□□ 0.35
KDM1A-205ENST00000494920 MIA2Q96PC5 1412 aa17.22■□□□□ 0.35
KDM1A-205ENST00000494920 SYCP2Q9BX26 1530 aa17.2■□□□□ 0.34
KDM1A-205ENST00000494920 FGD6Q6ZV73 1430 aa17.2■□□□□ 0.34
KDM1A-205ENST00000494920 POGZQ7Z3K3 1410 aa17.2■□□□□ 0.34
KDM1A-205ENST00000494920 KIAA1107Q9UPP5 1409 aa17.2■□□□□ 0.34
KDM1A-205ENST00000494920 KDM5CP41229 1560 aa17.19■□□□□ 0.34
KDM1A-205ENST00000494920 CAMSAP2Q08AD1 1489 aa17.19■□□□□ 0.34
KDM1A-205ENST00000494920 CFDP1Q9UEE9 299 aaPredicted RBP17.19■□□□□ 0.34
KDM1A-205ENST00000494920 ZMYM4Q5VZL5 1548 aa17.19■□□□□ 0.34
KDM1A-205ENST00000494920 SCAPERQ9BY12 1400 aa17.19■□□□□ 0.34
KDM1A-205ENST00000494920 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
KDM1A-205ENST00000494920 TCOF1Q13428 1488 aaKnown RBP17.18■□□□□ 0.34
KDM1A-205ENST00000494920 PLEKHH2Q8IVE3 1493 aa17.18■□□□□ 0.34
KDM1A-205ENST00000494920 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
KDM1A-205ENST00000494920 PTPN23Q9H3S7 1636 aa17.17■□□□□ 0.34
KDM1A-205ENST00000494920 TRAPPC8Q9Y2L5 1435 aa17.16■□□□□ 0.34
KDM1A-205ENST00000494920 ZNF644Q9H582 1327 aaPredicted RBP17.16■□□□□ 0.34
KDM1A-205ENST00000494920 ARHGEF5Q12774 1597 aa17.15■□□□□ 0.34
KDM1A-205ENST00000494920 ZNF518AQ6AHZ1 1483 aa17.14■□□□□ 0.33
KDM1A-205ENST00000494920 PPARGC1BQ86YN6 1023 aaKnown RBP17.13■□□□□ 0.33
KDM1A-205ENST00000494920 RAPGEF3O95398 923 aa17.12■□□□□ 0.33
KDM1A-205ENST00000494920 RRBP1Q9P2E9 1410 aaKnown RBP17.11■□□□□ 0.33
KDM1A-205ENST00000494920 ARHGEF40Q8TER5 1519 aa17.11■□□□□ 0.33
KDM1A-205ENST00000494920 INO80Q9ULG1 1556 aaPredicted RBP17.11■□□□□ 0.33
KDM1A-205ENST00000494920 ZNF777Q9ULD5 760 aaPredicted RBP17.1■□□□□ 0.33
KDM1A-205ENST00000494920 CCDC141Q6ZP82 1450 aa17.1■□□□□ 0.33
KDM1A-205ENST00000494920 MLH3Q9UHC1 1453 aa17.1■□□□□ 0.33
KDM1A-205ENST00000494920 HECW2Q9P2P5 1572 aa17.1■□□□□ 0.33
KDM1A-205ENST00000494920 KIDINS220Q9ULH0 1771 aa17.1■□□□□ 0.33
KDM1A-205ENST00000494920 MAGI2Q86UL8 1455 aa17.09■□□□□ 0.33
KDM1A-205ENST00000494920 DNMT1P26358 1616 aaKnown RBP17.09■□□□□ 0.33
KDM1A-205ENST00000494920 CROCC2H7BZ55 1655 aa17.09■□□□□ 0.33
KDM1A-205ENST00000494920 ZFYVE16Q7Z3T8 1539 aa17.08■□□□□ 0.32
KDM1A-205ENST00000494920 MAST1Q9Y2H9 1570 aa17.07■□□□□ 0.32
KDM1A-205ENST00000494920 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.323e-9■■■■■ 30.7
KDM1A-205ENST00000494920 AFAP1Q8N556 730 aa17.07■□□□□ 0.32
KDM1A-205ENST00000494920 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.32
KDM1A-205ENST00000494920 ABCA6Q8N139 1617 aa17.06■□□□□ 0.32
KDM1A-205ENST00000494920 YEATS2Q9ULM3 1422 aa17.05■□□□□ 0.32
KDM1A-205ENST00000494920 DIP2CQ9Y2E4 1556 aa17.05■□□□□ 0.32
KDM1A-205ENST00000494920 SHANK2Q9UPX8 1470 aa17.05■□□□□ 0.32
KDM1A-205ENST00000494920 ABCC5O15440 1437 aa17.04■□□□□ 0.32
KDM1A-205ENST00000494920 ATP7AQ04656 1500 aa17.04■□□□□ 0.32
KDM1A-205ENST00000494920 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
KDM1A-205ENST00000494920 DAPK1P53355 1430 aa17.03■□□□□ 0.32
KDM1A-205ENST00000494920 REREQ9P2R6 1566 aa17.02■□□□□ 0.32
KDM1A-205ENST00000494920 RTEL1-TNFRSF6BF6WH68 1400 aa17.02■□□□□ 0.31
KDM1A-205ENST00000494920 RSPH4AQ5TD94 716 aa17.01■□□□□ 0.31
KDM1A-205ENST00000494920 ADGBQ8N7X0 1667 aa17.01■□□□□ 0.31
KDM1A-205ENST00000494920 PLXNC1O60486 1568 aa17■□□□□ 0.31
KDM1A-205ENST00000494920 PTPRKQ15262 1439 aa16.99■□□□□ 0.31
KDM1A-205ENST00000494920 C9orf84Q5VXU9 1444 aa16.99■□□□□ 0.31
KDM1A-205ENST00000494920 SPAG9O60271 1321 aaKnown RBP16.98■□□□□ 0.31
KDM1A-205ENST00000494920 ATP10AO60312 1499 aa16.97■□□□□ 0.31
KDM1A-205ENST00000494920 ADGRL2O95490 1459 aa16.97■□□□□ 0.31
KDM1A-205ENST00000494920 FAM50AQ14320 339 aaKnown RBP16.94■□□□□ 0.3
KDM1A-205ENST00000494920 AGLP35573 1532 aa16.93■□□□□ 0.3
KDM1A-205ENST00000494920 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
KDM1A-205ENST00000494920 NCOA1Q15788 1441 aa16.91■□□□□ 0.3
KDM1A-205ENST00000494920 A2MP01023 1474 aa16.91■□□□□ 0.3
KDM1A-205ENST00000494920 TSPY4P0CV99 314 aa16.9■□□□□ 0.3
KDM1A-205ENST00000494920 TSPY10P0CW01 314 aa16.9■□□□□ 0.3
KDM1A-205ENST00000494920 ROCK1Q13464 1354 aa16.89■□□□□ 0.29
KDM1A-205ENST00000494920 DHX29Q7Z478 1369 aaKnown RBP16.88■□□□□ 0.29
KDM1A-205ENST00000494920 DUOX2Q9NRD8 1548 aa16.87■□□□□ 0.29
KDM1A-205ENST00000494920 EIF2AK4Q9P2K8 1649 aaKnown RBP16.87■□□□□ 0.29
KDM1A-205ENST00000494920 KIF15Q9NS87 1388 aa16.87■□□□□ 0.29
KDM1A-205ENST00000494920 ADAMTSL3P82987 1691 aa16.86■□□□□ 0.29
KDM1A-205ENST00000494920 ANKRD30AQ9BXX3 1397 aa16.85■□□□□ 0.29
KDM1A-205ENST00000494920 RNF17Q9BXT8 1623 aaKnown RBP16.85■□□□□ 0.29
KDM1A-205ENST00000494920 GCC2Q8IWJ2 1684 aa16.83■□□□□ 0.28
KDM1A-205ENST00000494920 MROH1Q8NDA8 1641 aa16.83■□□□□ 0.28
KDM1A-205ENST00000494920 ERBINQ96RT1 1412 aa16.83■□□□□ 0.28
KDM1A-205ENST00000494920 DEPDC5O75140 1603 aa16.82■□□□□ 0.28
KDM1A-205ENST00000494920 CHIC2Q9UKJ5 165 aa16.82■□□□□ 0.28
KDM1A-205ENST00000494920 MYT1LQ9UL68 1186 aa16.81■□□□□ 0.28
KDM1A-205ENST00000494920 MADDQ8WXG6 1647 aa16.79■□□□□ 0.28
KDM1A-205ENST00000494920 HFM1A2PYH4 1435 aa16.79■□□□□ 0.28
KDM1A-205ENST00000494920 NAIPQ13075 1403 aa16.79■□□□□ 0.28
KDM1A-205ENST00000494920 RRP7BPQ9NSQ0 103 aa16.78■□□□□ 0.28
KDM1A-205ENST00000494920 PRDM15P57071 1507 aaPredicted RBP16.78■□□□□ 0.28
KDM1A-205ENST00000494920 ANKRD50Q9ULJ7 1429 aa16.78■□□□□ 0.28
KDM1A-205ENST00000494920 FER1L4A9Z1Z3 1794 aa16.77■□□□□ 0.28
KDM1A-205ENST00000494920 ITGAEP38570 1179 aa16.77■□□□□ 0.28
KDM1A-205ENST00000494920 FAM135AQ9P2D6 1515 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms