RNA–Protein interactions for RNA: ENST00000494595.1

CNNM3-205, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 5

Gene CNNM3, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-205ENST00000494595 PREX2Q70Z35 1606 aa21.83■■□□□ 1.08
CNNM3-205ENST00000494595 MIA2Q96PC5 1412 aa21.81■■□□□ 1.08
CNNM3-205ENST00000494595 ARHGAP5Q13017 1502 aa21.81■■□□□ 1.08
CNNM3-205ENST00000494595 MYO5CQ9NQX4 1742 aa21.81■■□□□ 1.08
CNNM3-205ENST00000494595 CDC42BPAQ5VT25 1732 aa21.8■■□□□ 1.08
CNNM3-205ENST00000494595 AKNAQ7Z591 1439 aa21.8■■□□□ 1.08
CNNM3-205ENST00000494595 CDC42BPBQ9Y5S2 1711 aa21.79■■□□□ 1.08
CNNM3-205ENST00000494595 FGD6Q6ZV73 1430 aa21.77■■□□□ 1.08
CNNM3-205ENST00000494595 ZNF644Q9H582 1327 aaPredicted RBP21.77■■□□□ 1.07
CNNM3-205ENST00000494595 ITSN2Q9NZM3 1697 aa21.75■■□□□ 1.07
CNNM3-205ENST00000494595 TSPOAP1O95153 1857 aa21.75■■□□□ 1.07
CNNM3-205ENST00000494595 ZNF777Q9ULD5 760 aaPredicted RBP21.74■■□□□ 1.07
CNNM3-205ENST00000494595 COL17A1Q9UMD9 1497 aaPredicted RBP21.74■■□□□ 1.07
CNNM3-205ENST00000494595 KIAA1107Q9UPP5 1409 aa21.73■■□□□ 1.07
CNNM3-205ENST00000494595 SAMD9LQ8IVG5 1584 aa21.73■■□□□ 1.07
CNNM3-205ENST00000494595 CFAP74Q9C0B2 1584 aa21.73■■□□□ 1.07
CNNM3-205ENST00000494595 ADGRL1O94910 1474 aa21.72■■□□□ 1.07
CNNM3-205ENST00000494595 TCOF1Q13428 1488 aaKnown RBP21.72■■□□□ 1.07
CNNM3-205ENST00000494595 SCAPERQ9BY12 1400 aa21.72■■□□□ 1.07
CNNM3-205ENST00000494595 PLEKHH2Q8IVE3 1493 aa21.71■■□□□ 1.07
CNNM3-205ENST00000494595 ARHGEF12Q9NZN5 1544 aa21.71■■□□□ 1.07
CNNM3-205ENST00000494595 CAMSAP2Q08AD1 1489 aa21.71■■□□□ 1.07
CNNM3-205ENST00000494595 ABCC1P33527 1531 aa21.7■■□□□ 1.07
CNNM3-205ENST00000494595 RRBP1Q9P2E9 1410 aaKnown RBP21.7■■□□□ 1.06
CNNM3-205ENST00000494595 MBD5Q9P267 1494 aa21.7■■□□□ 1.06
CNNM3-205ENST00000494595 DENND4BO75064 1496 aaPredicted RBP21.67■■□□□ 1.06
CNNM3-205ENST00000494595 TRAPPC8Q9Y2L5 1435 aa21.66■■□□□ 1.06
CNNM3-205ENST00000494595 HNRNPMP52272 730 aaKnown RBP eCLIP21.66■■□□□ 1.06
CNNM3-205ENST00000494595 PTPN23Q9H3S7 1636 aa21.66■■□□□ 1.06
CNNM3-205ENST00000494595 SYCP2Q9BX26 1530 aa21.65■■□□□ 1.06
CNNM3-205ENST00000494595 POGZQ7Z3K3 1410 aa21.65■■□□□ 1.06
CNNM3-205ENST00000494595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.65■■□□□ 1.06
CNNM3-205ENST00000494595 RAPGEF3O95398 923 aa21.65■■□□□ 1.06
CNNM3-205ENST00000494595 RSPH4AQ5TD94 716 aa21.63■■□□□ 1.05
CNNM3-205ENST00000494595 AFAP1Q8N556 730 aa21.62■■□□□ 1.05
CNNM3-205ENST00000494595 ZNF518AQ6AHZ1 1483 aa21.61■■□□□ 1.05
CNNM3-205ENST00000494595 KDM6BO15054 1643 aa21.6■■□□□ 1.05
CNNM3-205ENST00000494595 FAM50AQ14320 339 aaKnown RBP21.6■■□□□ 1.05
CNNM3-205ENST00000494595 ARHGEF5Q12774 1597 aa21.6■■□□□ 1.05
CNNM3-205ENST00000494595 FRMPD1Q5SYB0 1578 aa21.6■■□□□ 1.05
CNNM3-205ENST00000494595 CCDC141Q6ZP82 1450 aa21.58■■□□□ 1.04
CNNM3-205ENST00000494595 KDM5CP41229 1560 aa21.57■■□□□ 1.04
CNNM3-205ENST00000494595 ABCC5O15440 1437 aa21.57■■□□□ 1.04
CNNM3-205ENST00000494595 DAPK1P53355 1430 aa21.55■■□□□ 1.04
CNNM3-205ENST00000494595 ZMYM4Q5VZL5 1548 aa21.55■■□□□ 1.04
CNNM3-205ENST00000494595 RICTORQ6R327 1708 aa21.55■■□□□ 1.04
CNNM3-205ENST00000494595 MLH3Q9UHC1 1453 aa21.54■■□□□ 1.04
CNNM3-205ENST00000494595 MAGI2Q86UL8 1455 aa21.52■■□□□ 1.04
CNNM3-205ENST00000494595 RTEL1-TNFRSF6BF6WH68 1400 aa21.52■■□□□ 1.04
CNNM3-205ENST00000494595 SPAG9O60271 1321 aaKnown RBP21.52■■□□□ 1.03
CNNM3-205ENST00000494595 DNMT1P26358 1616 aaKnown RBP21.51■■□□□ 1.03
CNNM3-205ENST00000494595 PTPRKQ15262 1439 aa21.51■■□□□ 1.03
CNNM3-205ENST00000494595 SHANK2Q9UPX8 1470 aa21.51■■□□□ 1.03
CNNM3-205ENST00000494595 TSPY4P0CV99 314 aa21.5■■□□□ 1.03
CNNM3-205ENST00000494595 TSPY10P0CW01 314 aa21.5■■□□□ 1.03
CNNM3-205ENST00000494595 C9orf84Q5VXU9 1444 aa21.48■■□□□ 1.03
CNNM3-205ENST00000494595 YEATS2Q9ULM3 1422 aa21.47■■□□□ 1.03
CNNM3-205ENST00000494595 MAST1Q9Y2H9 1570 aa21.47■■□□□ 1.03
CNNM3-205ENST00000494595 ZFYVE16Q7Z3T8 1539 aa21.46■■□□□ 1.03
CNNM3-205ENST00000494595 HECW2Q9P2P5 1572 aa21.46■■□□□ 1.03
CNNM3-205ENST00000494595 INO80Q9ULG1 1556 aaPredicted RBP21.46■■□□□ 1.03
CNNM3-205ENST00000494595 ATP7AQ04656 1500 aa21.45■■□□□ 1.02
CNNM3-205ENST00000494595 ADGRL2O95490 1459 aa21.43■■□□□ 1.02
CNNM3-205ENST00000494595 ITGAEP38570 1179 aa21.42■■□□□ 1.02
CNNM3-205ENST00000494595 CHIC2Q9UKJ5 165 aa21.42■■□□□ 1.02
CNNM3-205ENST00000494595 KIDINS220Q9ULH0 1771 aa21.42■■□□□ 1.02
CNNM3-205ENST00000494595 CROCC2H7BZ55 1655 aa21.41■■□□□ 1.02
CNNM3-205ENST00000494595 NCOA1Q15788 1441 aa21.41■■□□□ 1.02
CNNM3-205ENST00000494595 ROCK1Q13464 1354 aa21.41■■□□□ 1.02
CNNM3-205ENST00000494595 ARHGEF40Q8TER5 1519 aa21.4■■□□□ 1.02
CNNM3-205ENST00000494595 MYT1LQ9UL68 1186 aa21.4■■□□□ 1.02
CNNM3-205ENST00000494595 DIP2CQ9Y2E4 1556 aa21.4■■□□□ 1.02
CNNM3-205ENST00000494595 ATP10AO60312 1499 aa21.39■■□□□ 1.02
CNNM3-205ENST00000494595 ANKRD30AQ9BXX3 1397 aa21.39■■□□□ 1.02
CNNM3-205ENST00000494595 ABCA6Q8N139 1617 aa21.37■■□□□ 1.01
CNNM3-205ENST00000494595 PLXNC1O60486 1568 aa21.36■■□□□ 1.01
CNNM3-205ENST00000494595 TRIM26Q12899 539 aaPredicted RBP21.36■■□□□ 1.01
CNNM3-205ENST00000494595 DHX29Q7Z478 1369 aaKnown RBP21.36■■□□□ 1.01
CNNM3-205ENST00000494595 RRP7BPQ9NSQ0 103 aa21.35■■□□□ 1.01
CNNM3-205ENST00000494595 KIF15Q9NS87 1388 aa21.35■■□□□ 1.01
CNNM3-205ENST00000494595 A2MP01023 1474 aa21.34■■□□□ 1.01
CNNM3-205ENST00000494595 REREQ9P2R6 1566 aa21.34■■□□□ 1.01
CNNM3-205ENST00000494595 HFM1A2PYH4 1435 aa21.29■■□□□ 1
CNNM3-205ENST00000494595 AGLP35573 1532 aa21.29■■□□□ 1
CNNM3-205ENST00000494595 DUOX2Q9NRD8 1548 aa21.29■■□□□ 1
CNNM3-205ENST00000494595 NAIPQ13075 1403 aa21.29■■□□□ 1
CNNM3-205ENST00000494595 ADGBQ8N7X0 1667 aa21.28■■□□□ 1
CNNM3-205ENST00000494595 ERBINQ96RT1 1412 aa21.27■■□□□ 1
CNNM3-205ENST00000494595 ANKRD50Q9ULJ7 1429 aa21.26■□□□□ 0.99
CNNM3-205ENST00000494595 SIGLEC1Q9BZZ2 1709 aa21.24■□□□□ 0.99
CNNM3-205ENST00000494595 KIF3BO15066 747 aa21.21■□□□□ 0.99
CNNM3-205ENST00000494595 ARID4BQ4LE39 1312 aaPredicted RBP21.19■□□□□ 0.98
CNNM3-205ENST00000494595 SETD5Q9C0A6 1442 aa21.18■□□□□ 0.98
CNNM3-205ENST00000494595 EIF2AK4Q9P2K8 1649 aaKnown RBP21.18■□□□□ 0.98
CNNM3-205ENST00000494595 BCORL1Q5H9F3 1711 aa21.18■□□□□ 0.98
CNNM3-205ENST00000494595 GCC2Q8IWJ2 1684 aa21.15■□□□□ 0.98
CNNM3-205ENST00000494595 GGT6Q6P531 493 aa21.14■□□□□ 0.97
CNNM3-205ENST00000494595 PPP6R1Q9UPN7 881 aa21.14■□□□□ 0.97
CNNM3-205ENST00000494595 MLECQ14165 292 aa21.13■□□□□ 0.97
CNNM3-205ENST00000494595 RNF17Q9BXT8 1623 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms