RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 CDK11AQ9UQ88 783 aaPredicted RBP8.59□□□□□ -1.03
SRPRB-205ENST00000494297 RBM42Q9BTD8 480 aaKnown RBP8.58□□□□□ -1.04
SRPRB-205ENST00000494297 KIF13AQ9H1H9 1805 aa8.58□□□□□ -1.04
SRPRB-205ENST00000494297 HECW1Q76N89 1606 aa8.58□□□□□ -1.04
SRPRB-205ENST00000494297 FYCO1Q9BQS8 1478 aa8.57□□□□□ -1.04
SRPRB-205ENST00000494297 FOXD4L1Q9NU39 408 aa8.56□□□□□ -1.04
SRPRB-205ENST00000494297 CCDC18Q5T9S5 1454 aa8.56□□□□□ -1.04
SRPRB-205ENST00000494297 CD109Q6YHK3 1445 aa8.55□□□□□ -1.04
SRPRB-205ENST00000494297 CDK13Q14004 1512 aaKnown RBP8.55□□□□□ -1.04
SRPRB-205ENST00000494297 MAGI3Q5TCQ9 1506 aa8.54□□□□□ -1.04
SRPRB-205ENST00000494297 MAP3K4Q9Y6R4 1608 aa8.54□□□□□ -1.04
SRPRB-205ENST00000494297 PCF11O94913 1555 aaKnown RBP8.54□□□□□ -1.04
SRPRB-205ENST00000494297 VPS8Q8N3P4 1428 aa8.54□□□□□ -1.04
SRPRB-205ENST00000494297 TROQ12816 1431 aaPredicted RBP8.53□□□□□ -1.04
SRPRB-205ENST00000494297 TEX14Q8IWB6 1497 aa8.52□□□□□ -1.05
SRPRB-205ENST00000494297 ABCA9Q8IUA7 1624 aa8.52□□□□□ -1.05
SRPRB-205ENST00000494297 CFAP43Q8NDM7 1665 aa8.52□□□□□ -1.05
SRPRB-205ENST00000494297 PHLDB1Q86UU1 1377 aa8.51□□□□□ -1.05
SRPRB-205ENST00000494297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.51□□□□□ -1.05
SRPRB-205ENST00000494297 LRRIQ1Q96JM4 1722 aa8.51□□□□□ -1.05
SRPRB-205ENST00000494297 PPRC1Q5VV67 1664 aaKnown RBP8.5□□□□□ -1.05
SRPRB-205ENST00000494297 PLCH2O75038 1416 aa8.5□□□□□ -1.05
SRPRB-205ENST00000494297 MAP3K1Q13233 1512 aa8.49□□□□□ -1.05
SRPRB-205ENST00000494297 ATF5Q9Y2D1 282 aaPredicted RBP8.48□□□□□ -1.05
SRPRB-205ENST00000494297 NEO1Q92859 1461 aa8.48□□□□□ -1.05
SRPRB-205ENST00000494297 COL17A1Q9UMD9 1497 aaPredicted RBP8.48□□□□□ -1.05
SRPRB-205ENST00000494297 MTUS2Q5JR59 1369 aa8.48□□□□□ -1.05
SRPRB-205ENST00000494297 TSPOAP1O95153 1857 aa8.47□□□□□ -1.05
SRPRB-205ENST00000494297 EFCAB2Q5VUJ9 269 aa8.47□□□□□ -1.05
SRPRB-205ENST00000494297 ARAP3Q8WWN8 1544 aa8.47□□□□□ -1.05
SRPRB-205ENST00000494297 KIF14Q15058 1648 aa8.47□□□□□ -1.05
SRPRB-205ENST00000494297 AKNAQ7Z591 1439 aa8.46□□□□□ -1.06
SRPRB-205ENST00000494297 FANCAO15360 1455 aa8.45□□□□□ -1.06
SRPRB-205ENST00000494297 TTC37Q6PGP7 1564 aa8.45□□□□□ -1.06
SRPRB-205ENST00000494297 KDM6BO15054 1643 aa8.45□□□□□ -1.06
SRPRB-205ENST00000494297 KANK4Q5T7N3 995 aaPredicted RBP8.45□□□□□ -1.06
SRPRB-205ENST00000494297 TIAM1Q13009 1591 aa8.44□□□□□ -1.06
SRPRB-205ENST00000494297 LRRC9Q6ZRR7 1453 aa8.44□□□□□ -1.06
SRPRB-205ENST00000494297 EHBP1L1Q8N3D4 1523 aa8.44□□□□□ -1.06
SRPRB-205ENST00000494297 GPATCH8Q9UKJ3 1502 aaKnown RBP8.44□□□□□ -1.06
SRPRB-205ENST00000494297 RAPGEF3O95398 923 aa8.42□□□□□ -1.06
SRPRB-205ENST00000494297 CCNB3Q8WWL7 1395 aa8.42□□□□□ -1.06
SRPRB-205ENST00000494297 CFAP74Q9C0B2 1584 aa8.42□□□□□ -1.06
SRPRB-205ENST00000494297 DENND4BO75064 1496 aaPredicted RBP8.41□□□□□ -1.06
SRPRB-205ENST00000494297 SCAPERQ9BY12 1400 aa8.41□□□□□ -1.06
SRPRB-205ENST00000494297 ZBTB22O15209 634 aa8.41□□□□□ -1.06
SRPRB-205ENST00000494297 CFDP1Q9UEE9 299 aaPredicted RBP8.41□□□□□ -1.06
SRPRB-205ENST00000494297 MYO5CQ9NQX4 1742 aa8.4□□□□□ -1.06
SRPRB-205ENST00000494297 ARHGAP5Q13017 1502 aa8.4□□□□□ -1.06
SRPRB-205ENST00000494297 NCOA2Q15596 1464 aa8.4□□□□□ -1.06
SRPRB-205ENST00000494297 ADGRL1O94910 1474 aa8.39□□□□□ -1.07
SRPRB-205ENST00000494297 CDC42BPBQ9Y5S2 1711 aa8.39□□□□□ -1.07
SRPRB-205ENST00000494297 PREX2Q70Z35 1606 aa8.39□□□□□ -1.07
SRPRB-205ENST00000494297 KIAA1107Q9UPP5 1409 aa8.38□□□□□ -1.07
SRPRB-205ENST00000494297 SUPT6HQ7KZ85 1726 aaKnown RBP8.38□□□□□ -1.07
SRPRB-205ENST00000494297 AFAP1Q8N556 730 aa8.38□□□□□ -1.07
SRPRB-205ENST00000494297 ZNF777Q9ULD5 760 aaPredicted RBP8.38□□□□□ -1.07
SRPRB-205ENST00000494297 POGZQ7Z3K3 1410 aa8.37□□□□□ -1.07
SRPRB-205ENST00000494297 CDC42BPAQ5VT25 1732 aa8.37□□□□□ -1.07
SRPRB-205ENST00000494297 HNRNPMP52272 730 aaKnown RBP eCLIP8.37□□□□□ -1.07
SRPRB-205ENST00000494297 RSPH4AQ5TD94 716 aa8.37□□□□□ -1.07
SRPRB-205ENST00000494297 ZBTB12Q9Y330 459 aaPredicted RBP8.37□□□□□ -1.07
SRPRB-205ENST00000494297 ARHGEF12Q9NZN5 1544 aa8.37□□□□□ -1.07
SRPRB-205ENST00000494297 MAGI2Q86UL8 1455 aa8.37□□□□□ -1.07
SRPRB-205ENST00000494297 PLEKHH2Q8IVE3 1493 aa8.37□□□□□ -1.07
SRPRB-205ENST00000494297 MIA2Q96PC5 1412 aa8.37□□□□□ -1.07
SRPRB-205ENST00000494297 FRMPD1Q5SYB0 1578 aa8.36□□□□□ -1.07
SRPRB-205ENST00000494297 ZNF644Q9H582 1327 aaPredicted RBP8.36□□□□□ -1.07
SRPRB-205ENST00000494297 ZNF518AQ6AHZ1 1483 aa8.36□□□□□ -1.07
SRPRB-205ENST00000494297 TRAPPC8Q9Y2L5 1435 aa8.36□□□□□ -1.07
SRPRB-205ENST00000494297 SAMD9LQ8IVG5 1584 aa8.35□□□□□ -1.07
SRPRB-205ENST00000494297 ABCC1P33527 1531 aa8.35□□□□□ -1.07
SRPRB-205ENST00000494297 RICTORQ6R327 1708 aa8.35□□□□□ -1.07
SRPRB-205ENST00000494297 HAX1O00165 279 aa8.35□□□□□ -1.07
SRPRB-205ENST00000494297 PIP4P2Q8N4L2 257 aa8.35□□□□□ -1.07
SRPRB-205ENST00000494297 MYOM3Q5VTT5 1437 aa8.35□□□□□ -1.07
SRPRB-205ENST00000494297 ZMYM4Q5VZL5 1548 aa8.34□□□□□ -1.07
SRPRB-205ENST00000494297 MBD5Q9P267 1494 aa8.34□□□□□ -1.07
SRPRB-205ENST00000494297 MLH3Q9UHC1 1453 aa8.34□□□□□ -1.07
SRPRB-205ENST00000494297 KDM5CP41229 1560 aa8.34□□□□□ -1.07
SRPRB-205ENST00000494297 ITSN2Q9NZM3 1697 aa8.34□□□□□ -1.08
SRPRB-205ENST00000494297 YEATS2Q9ULM3 1422 aa8.32□□□□□ -1.08
SRPRB-205ENST00000494297 ATP10AO60312 1499 aa8.32□□□□□ -1.08
SRPRB-205ENST00000494297 SPAG9O60271 1321 aaKnown RBP8.31□□□□□ -1.08
SRPRB-205ENST00000494297 RTEL1-TNFRSF6BF6WH68 1400 aa8.31□□□□□ -1.08
SRPRB-205ENST00000494297 ZFYVE16Q7Z3T8 1539 aa8.31□□□□□ -1.08
SRPRB-205ENST00000494297 SYCP2Q9BX26 1530 aa8.31□□□□□ -1.08
SRPRB-205ENST00000494297 KDM4FA0A1W2PPD8 638 aa8.31□□□□□ -1.08
SRPRB-205ENST00000494297 TSPY4P0CV99 314 aa8.31□□□□□ -1.08
SRPRB-205ENST00000494297 TSPY10P0CW01 314 aa8.31□□□□□ -1.08
SRPRB-205ENST00000494297 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
SRPRB-205ENST00000494297 CAMSAP2Q08AD1 1489 aa8.31□□□□□ -1.08
SRPRB-205ENST00000494297 FGD6Q6ZV73 1430 aa8.3□□□□□ -1.08
SRPRB-205ENST00000494297 TCOF1Q13428 1488 aaKnown RBP8.3□□□□□ -1.08
SRPRB-205ENST00000494297 CCDC141Q6ZP82 1450 aa8.29□□□□□ -1.08
SRPRB-205ENST00000494297 ARHGEF5Q12774 1597 aa8.29□□□□□ -1.08
SRPRB-205ENST00000494297 ARHGEF40Q8TER5 1519 aa8.29□□□□□ -1.08
SRPRB-205ENST00000494297 C9orf84Q5VXU9 1444 aa8.29□□□□□ -1.08
SRPRB-205ENST00000494297 HECW2Q9P2P5 1572 aa8.28□□□□□ -1.08
SRPRB-205ENST00000494297 PPARGC1BQ86YN6 1023 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms