RNA–Protein interactions for RNA: ENST00000494229.1

VGLL3-203, Transcript of vestigial like family member 3, humanhuman

TSL 3

Gene VGLL3, Length 624 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-203ENST00000494229 ZMYM4Q5VZL5 1548 aa13.12□□□□□ -0.31
VGLL3-203ENST00000494229 CDK13Q14004 1512 aaKnown RBP13.1□□□□□ -0.31
VGLL3-203ENST00000494229 PCF11O94913 1555 aaKnown RBP13.09□□□□□ -0.31
VGLL3-203ENST00000494229 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
VGLL3-203ENST00000494229 LMTK3Q96Q04 1460 aa13.09□□□□□ -0.31
VGLL3-203ENST00000494229 CFAP74Q9C0B2 1584 aa13.08□□□□□ -0.32
VGLL3-203ENST00000494229 RIMS1Q86UR5 1692 aaKnown RBP13.08□□□□□ -0.32
VGLL3-203ENST00000494229 AKNAQ7Z591 1439 aa13.07□□□□□ -0.32
VGLL3-203ENST00000494229 EFCAB2Q5VUJ9 269 aa13.07□□□□□ -0.32
VGLL3-203ENST00000494229 FANCAO15360 1455 aa13.07□□□□□ -0.32
VGLL3-203ENST00000494229 DENND4BO75064 1496 aaPredicted RBP13.07□□□□□ -0.32
VGLL3-203ENST00000494229 LRRIQ1Q96JM4 1722 aa13.06□□□□□ -0.32
VGLL3-203ENST00000494229 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
VGLL3-203ENST00000494229 CCNB3Q8WWL7 1395 aa13.04□□□□□ -0.32
VGLL3-203ENST00000494229 CFDP1Q9UEE9 299 aaPredicted RBP13.03□□□□□ -0.32
VGLL3-203ENST00000494229 MYT1LQ9UL68 1186 aa13.03□□□□□ -0.32
VGLL3-203ENST00000494229 ZNF777Q9ULD5 760 aaPredicted RBP13.02□□□□□ -0.33
VGLL3-203ENST00000494229 ZFYVE16Q7Z3T8 1539 aa13.02□□□□□ -0.33
VGLL3-203ENST00000494229 KIF14Q15058 1648 aa13.02□□□□□ -0.33
VGLL3-203ENST00000494229 PLCH2O75038 1416 aa13.01□□□□□ -0.33
VGLL3-203ENST00000494229 MYO5CQ9NQX4 1742 aa13.01□□□□□ -0.33
VGLL3-203ENST00000494229 MAGI2Q86UL8 1455 aa13□□□□□ -0.33
VGLL3-203ENST00000494229 POGZQ7Z3K3 1410 aa13□□□□□ -0.33
VGLL3-203ENST00000494229 FER1L4A9Z1Z3 1794 aa12.99□□□□□ -0.33
VGLL3-203ENST00000494229 MAP3K1Q13233 1512 aa12.99□□□□□ -0.33
VGLL3-203ENST00000494229 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
VGLL3-203ENST00000494229 ARHGEF12Q9NZN5 1544 aa12.98□□□□□ -0.33
VGLL3-203ENST00000494229 KDM5CP41229 1560 aa12.97□□□□□ -0.33
VGLL3-203ENST00000494229 TIAM1Q13009 1591 aa12.96□□□□□ -0.33
VGLL3-203ENST00000494229 KANK4Q5T7N3 995 aaPredicted RBP12.96□□□□□ -0.33
VGLL3-203ENST00000494229 FBXO41Q8TF61 875 aa12.96□□□□□ -0.33
VGLL3-203ENST00000494229 ARHGAP5Q13017 1502 aa12.96□□□□□ -0.33
VGLL3-203ENST00000494229 LRRC9Q6ZRR7 1453 aa12.96□□□□□ -0.34
VGLL3-203ENST00000494229 CDC42BPBQ9Y5S2 1711 aa12.96□□□□□ -0.34
VGLL3-203ENST00000494229 SCAPERQ9BY12 1400 aa12.96□□□□□ -0.34
VGLL3-203ENST00000494229 ARID4BQ4LE39 1312 aaPredicted RBP12.93□□□□□ -0.34
VGLL3-203ENST00000494229 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
VGLL3-203ENST00000494229 ATP10AO60312 1499 aa12.92□□□□□ -0.34
VGLL3-203ENST00000494229 REREQ9P2R6 1566 aa12.92□□□□□ -0.34
VGLL3-203ENST00000494229 DIP2CQ9Y2E4 1556 aa12.92□□□□□ -0.34
VGLL3-203ENST00000494229 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
VGLL3-203ENST00000494229 C9orf84Q5VXU9 1444 aa12.91□□□□□ -0.34
VGLL3-203ENST00000494229 HSPA2P54652 639 aa12.91□□□□□ -0.34
VGLL3-203ENST00000494229 PREX1Q8TCU6 1659 aa12.91□□□□□ -0.34
VGLL3-203ENST00000494229 STRCQ7RTU9 1775 aa12.91□□□□□ -0.34
VGLL3-203ENST00000494229 PREX2Q70Z35 1606 aa12.91□□□□□ -0.34
VGLL3-203ENST00000494229 ABCA6Q8N139 1617 aa12.91□□□□□ -0.34
VGLL3-203ENST00000494229 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
VGLL3-203ENST00000494229 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
VGLL3-203ENST00000494229 TSPY4P0CV99 314 aa12.9□□□□□ -0.34
VGLL3-203ENST00000494229 TSPY10P0CW01 314 aa12.9□□□□□ -0.34
VGLL3-203ENST00000494229 PPARGC1BQ86YN6 1023 aaKnown RBP12.9□□□□□ -0.34
VGLL3-203ENST00000494229 GPATCH8Q9UKJ3 1502 aaKnown RBP12.89□□□□□ -0.35
VGLL3-203ENST00000494229 SETD1BQ9UPS6 1966 aaKnown RBP12.89□□□□□ -0.35
VGLL3-203ENST00000494229 CDC42BPAQ5VT25 1732 aa12.88□□□□□ -0.35
VGLL3-203ENST00000494229 ZNF518AQ6AHZ1 1483 aa12.88□□□□□ -0.35
VGLL3-203ENST00000494229 ITSN2Q9NZM3 1697 aa12.88□□□□□ -0.35
VGLL3-203ENST00000494229 ABCC1P33527 1531 aa12.88□□□□□ -0.35
VGLL3-203ENST00000494229 KIDINS220Q9ULH0 1771 aa12.87□□□□□ -0.35
VGLL3-203ENST00000494229 HNRNPMP52272 730 aaKnown RBP eCLIP12.87□□□□□ -0.35
VGLL3-203ENST00000494229 FAM50AQ14320 339 aaKnown RBP12.87□□□□□ -0.35
VGLL3-203ENST00000494229 C3P01024 1663 aa12.86□□□□□ -0.35
VGLL3-203ENST00000494229 MLH3Q9UHC1 1453 aa12.86□□□□□ -0.35
VGLL3-203ENST00000494229 PLPPR3Q6T4P5 718 aa12.86□□□□□ -0.35
VGLL3-203ENST00000494229 AGLP35573 1532 aa12.85□□□□□ -0.35
VGLL3-203ENST00000494229 AFAP1Q8N556 730 aa12.85□□□□□ -0.35
VGLL3-203ENST00000494229 MYOM3Q5VTT5 1437 aa12.85□□□□□ -0.35
VGLL3-203ENST00000494229 MIA2Q96PC5 1412 aa12.85□□□□□ -0.35
VGLL3-203ENST00000494229 SPAG9O60271 1321 aaKnown RBP12.85□□□□□ -0.35
VGLL3-203ENST00000494229 KIAA1107Q9UPP5 1409 aa12.84□□□□□ -0.35
VGLL3-203ENST00000494229 TRAPPC8Q9Y2L5 1435 aa12.84□□□□□ -0.35
VGLL3-203ENST00000494229 MLECQ14165 292 aa12.83□□□□□ -0.36
VGLL3-203ENST00000494229 ZNF644Q9H582 1327 aaPredicted RBP12.82□□□□□ -0.36
VGLL3-203ENST00000494229 CEBPAP49715 358 aaPredicted RBP12.81□□□□□ -0.36
VGLL3-203ENST00000494229 SAMD9LQ8IVG5 1584 aa12.81□□□□□ -0.36
VGLL3-203ENST00000494229 ESF1Q9H501 851 aaKnown RBP12.8□□□□□ -0.36
VGLL3-203ENST00000494229 CERKQ8TCT0 537 aa12.78□□□□□ -0.36
VGLL3-203ENST00000494229 FGD6Q6ZV73 1430 aa12.78□□□□□ -0.36
VGLL3-203ENST00000494229 CAMSAP2Q08AD1 1489 aa12.77□□□□□ -0.37
VGLL3-203ENST00000494229 MROH2AA6NES4 1674 aa12.77□□□□□ -0.37
VGLL3-203ENST00000494229 ITGAEP38570 1179 aa12.76□□□□□ -0.37
VGLL3-203ENST00000494229 PLXNC1O60486 1568 aa12.76□□□□□ -0.37
VGLL3-203ENST00000494229 INO80Q9ULG1 1556 aaPredicted RBP12.76□□□□□ -0.37
VGLL3-203ENST00000494229 UHRF1BP1Q6BDS2 1440 aa12.75□□□□□ -0.37
VGLL3-203ENST00000494229 CCDC141Q6ZP82 1450 aa12.75□□□□□ -0.37
VGLL3-203ENST00000494229 LTBP4Q8N2S1 1624 aa12.75□□□□□ -0.37
VGLL3-203ENST00000494229 SYCP2Q9BX26 1530 aa12.75□□□□□ -0.37
VGLL3-203ENST00000494229 PTPRTO14522 1441 aa12.72□□□□□ -0.37
VGLL3-203ENST00000494229 CHIC2Q9UKJ5 165 aa12.72□□□□□ -0.37
VGLL3-203ENST00000494229 RTEL1-TNFRSF6BF6WH68 1400 aa12.71□□□□□ -0.37
VGLL3-203ENST00000494229 ANKRD30AQ9BXX3 1397 aa12.71□□□□□ -0.37
VGLL3-203ENST00000494229 ATP7AQ04656 1500 aa12.71□□□□□ -0.38
VGLL3-203ENST00000494229 NCOA1Q15788 1441 aa12.71□□□□□ -0.38
VGLL3-203ENST00000494229 ZNF142P52746 1687 aaPredicted RBP12.7□□□□□ -0.38
VGLL3-203ENST00000494229 PTPN23Q9H3S7 1636 aa12.7□□□□□ -0.38
VGLL3-203ENST00000494229 RRP7BPQ9NSQ0 103 aa12.7□□□□□ -0.38
VGLL3-203ENST00000494229 MBD5Q9P267 1494 aa12.7□□□□□ -0.38
VGLL3-203ENST00000494229 CNTLNQ9NXG0 1405 aa12.7□□□□□ -0.38
VGLL3-203ENST00000494229 CLTCQ00610 1675 aaKnown RBP12.69□□□□□ -0.38
VGLL3-203ENST00000494229 NPATQ14207 1427 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms