RNA–Protein interactions for RNA: ENST00000494065.2

DEPDC5-220, Transcript of DEP domain containing 5, humanhuman

TSL 3

Gene DEPDC5, Length 414 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-220ENST00000494065 FAM9AQ8IZU1 332 aaPredicted RBP13.47□□□□□ -0.25
DEPDC5-220ENST00000494065 CFAP43Q8NDM7 1665 aa13.46□□□□□ -0.26
DEPDC5-220ENST00000494065 EFCAB5A4FU69 1503 aa13.43□□□□□ -0.26
DEPDC5-220ENST00000494065 RAPGEF6Q8TEU7 1601 aa13.42□□□□□ -0.26
DEPDC5-220ENST00000494065 MAGI3Q5TCQ9 1506 aa13.4□□□□□ -0.26
DEPDC5-220ENST00000494065 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
DEPDC5-220ENST00000494065 CD109Q6YHK3 1445 aa13.37□□□□□ -0.27
DEPDC5-220ENST00000494065 ATP10BO94823 1461 aa13.36□□□□□ -0.27
DEPDC5-220ENST00000494065 ABCA9Q8IUA7 1624 aa13.35□□□□□ -0.27
DEPDC5-220ENST00000494065 FHOD3Q2V2M9 1422 aa13.35□□□□□ -0.27
DEPDC5-220ENST00000494065 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
DEPDC5-220ENST00000494065 NUP153P49790 1475 aaKnown RBP13.34□□□□□ -0.27
DEPDC5-220ENST00000494065 COL17A1Q9UMD9 1497 aaPredicted RBP13.33□□□□□ -0.28
DEPDC5-220ENST00000494065 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
DEPDC5-220ENST00000494065 KCNH8Q96L42 1107 aa13.3□□□□□ -0.28
DEPDC5-220ENST00000494065 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
DEPDC5-220ENST00000494065 ADGRL1O94910 1474 aa13.29□□□□□ -0.28
DEPDC5-220ENST00000494065 ARID3CA6NKF2 412 aa13.29□□□□□ -0.28
DEPDC5-220ENST00000494065 FBXO3Q9UK99 471 aa13.29□□□□□ -0.28
DEPDC5-220ENST00000494065 PHLDB1Q86UU1 1377 aa13.29□□□□□ -0.28
DEPDC5-220ENST00000494065 ARAP3Q8WWN8 1544 aa13.29□□□□□ -0.28
DEPDC5-220ENST00000494065 NEO1Q92859 1461 aa13.27□□□□□ -0.29
DEPDC5-220ENST00000494065 CFAP74Q9C0B2 1584 aa13.27□□□□□ -0.29
DEPDC5-220ENST00000494065 HECW1Q76N89 1606 aa13.27□□□□□ -0.29
DEPDC5-220ENST00000494065 RANGAP1P46060 587 aaPredicted RBP13.26□□□□□ -0.29
DEPDC5-220ENST00000494065 FMN1Q68DA7 1419 aa13.26□□□□□ -0.29
DEPDC5-220ENST00000494065 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
DEPDC5-220ENST00000494065 PITPNM1O00562 1244 aa13.22□□□□□ -0.29
DEPDC5-220ENST00000494065 UBTFP17480 764 aaKnown RBP13.22□□□□□ -0.29
DEPDC5-220ENST00000494065 ARHGAP35Q9NRY4 1499 aa13.22□□□□□ -0.29
DEPDC5-220ENST00000494065 CDK13Q14004 1512 aaKnown RBP13.21□□□□□ -0.29
DEPDC5-220ENST00000494065 TTC37Q6PGP7 1564 aa13.2□□□□□ -0.3
DEPDC5-220ENST00000494065 FRMPD1Q5SYB0 1578 aa13.2□□□□□ -0.3
DEPDC5-220ENST00000494065 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.19□□□□□ -0.3
DEPDC5-220ENST00000494065 PLEKHD1A6NEE1 506 aa13.19□□□□□ -0.3
DEPDC5-220ENST00000494065 ARHGEF40Q8TER5 1519 aa13.18□□□□□ -0.3
DEPDC5-220ENST00000494065 FANCAO15360 1455 aa13.17□□□□□ -0.3
DEPDC5-220ENST00000494065 KIF14Q15058 1648 aa13.17□□□□□ -0.3
DEPDC5-220ENST00000494065 RICTORQ6R327 1708 aa13.16□□□□□ -0.3
DEPDC5-220ENST00000494065 DENND4BO75064 1496 aaPredicted RBP13.16□□□□□ -0.3
DEPDC5-220ENST00000494065 ZMYM4Q5VZL5 1548 aa13.15□□□□□ -0.3
DEPDC5-220ENST00000494065 MYO5CQ9NQX4 1742 aa13.15□□□□□ -0.3
DEPDC5-220ENST00000494065 CLIP1P30622 1438 aa13.14□□□□□ -0.31
DEPDC5-220ENST00000494065 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
DEPDC5-220ENST00000494065 CCDC18Q5T9S5 1454 aa13.14□□□□□ -0.31
DEPDC5-220ENST00000494065 PCF11O94913 1555 aaKnown RBP13.14□□□□□ -0.31
DEPDC5-220ENST00000494065 AKNAQ7Z591 1439 aa13.13□□□□□ -0.31
DEPDC5-220ENST00000494065 CDK11AQ9UQ88 783 aaPredicted RBP13.12□□□□□ -0.31
DEPDC5-220ENST00000494065 TROQ12816 1431 aaPredicted RBP13.12□□□□□ -0.31
DEPDC5-220ENST00000494065 FYCO1Q9BQS8 1478 aa13.1□□□□□ -0.31
DEPDC5-220ENST00000494065 ZFYVE16Q7Z3T8 1539 aa13.1□□□□□ -0.31
DEPDC5-220ENST00000494065 ADAMTSL3P82987 1691 aa13.1□□□□□ -0.31
DEPDC5-220ENST00000494065 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
DEPDC5-220ENST00000494065 PLCH2O75038 1416 aa13.1□□□□□ -0.31
DEPDC5-220ENST00000494065 CASKIN1Q8WXD9 1431 aa13.1□□□□□ -0.31
DEPDC5-220ENST00000494065 HECW2Q9P2P5 1572 aa13.1□□□□□ -0.31
DEPDC5-220ENST00000494065 LRRIQ1Q96JM4 1722 aa13.1□□□□□ -0.31
DEPDC5-220ENST00000494065 RAPGEF3O95398 923 aa13.09□□□□□ -0.31
DEPDC5-220ENST00000494065 BCORL1Q5H9F3 1711 aa13.09□□□□□ -0.31
DEPDC5-220ENST00000494065 POGZQ7Z3K3 1410 aa13.09□□□□□ -0.31
DEPDC5-220ENST00000494065 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
DEPDC5-220ENST00000494065 MAGI2Q86UL8 1455 aa13.09□□□□□ -0.31
DEPDC5-220ENST00000494065 PRR29P0C7W0 189 aa13.08□□□□□ -0.32
DEPDC5-220ENST00000494065 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
DEPDC5-220ENST00000494065 ARHGAP5Q13017 1502 aa13.07□□□□□ -0.32
DEPDC5-220ENST00000494065 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
DEPDC5-220ENST00000494065 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
DEPDC5-220ENST00000494065 SCAPERQ9BY12 1400 aa13.04□□□□□ -0.32
DEPDC5-220ENST00000494065 PTPRMP28827 1452 aa13.04□□□□□ -0.32
DEPDC5-220ENST00000494065 ZNF518AQ6AHZ1 1483 aa13.04□□□□□ -0.32
DEPDC5-220ENST00000494065 KDM5CP41229 1560 aa13.03□□□□□ -0.32
DEPDC5-220ENST00000494065 EFCAB2Q5VUJ9 269 aa13.02□□□□□ -0.33
DEPDC5-220ENST00000494065 ARID4BQ4LE39 1312 aaPredicted RBP13.02□□□□□ -0.33
DEPDC5-220ENST00000494065 FXR2P51116 673 aaKnown RBP eCLIP13.01□□□□□ -0.33
DEPDC5-220ENST00000494065 YEATS2Q9ULM3 1422 aa13.01□□□□□ -0.33
DEPDC5-220ENST00000494065 RIMS1Q86UR5 1692 aaKnown RBP13.01□□□□□ -0.33
DEPDC5-220ENST00000494065 ABCC1P33527 1531 aa13□□□□□ -0.33
DEPDC5-220ENST00000494065 C9orf84Q5VXU9 1444 aa13□□□□□ -0.33
DEPDC5-220ENST00000494065 CDC42BPBQ9Y5S2 1711 aa12.99□□□□□ -0.33
DEPDC5-220ENST00000494065 ITSN2Q9NZM3 1697 aa12.99□□□□□ -0.33
DEPDC5-220ENST00000494065 FER1L4A9Z1Z3 1794 aa12.98□□□□□ -0.33
DEPDC5-220ENST00000494065 CDC42BPAQ5VT25 1732 aa12.98□□□□□ -0.33
DEPDC5-220ENST00000494065 ATP10AO60312 1499 aa12.97□□□□□ -0.33
DEPDC5-220ENST00000494065 REREQ9P2R6 1566 aa12.97□□□□□ -0.33
DEPDC5-220ENST00000494065 SIGLEC1Q9BZZ2 1709 aa12.96□□□□□ -0.33
DEPDC5-220ENST00000494065 DIP2CQ9Y2E4 1556 aa12.95□□□□□ -0.34
DEPDC5-220ENST00000494065 EHBP1L1Q8N3D4 1523 aa12.94□□□□□ -0.34
DEPDC5-220ENST00000494065 ARHGEF12Q9NZN5 1544 aa12.94□□□□□ -0.34
DEPDC5-220ENST00000494065 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
DEPDC5-220ENST00000494065 MIER1Q8N108 512 aa12.94□□□□□ -0.34
DEPDC5-220ENST00000494065 CREBZFQ9NS37 354 aa12.94□□□□□ -0.34
DEPDC5-220ENST00000494065 ABCA6Q8N139 1617 aa12.94□□□□□ -0.34
DEPDC5-220ENST00000494065 CEP162Q5TB80 1403 aa12.94□□□□□ -0.34
DEPDC5-220ENST00000494065 MLH3Q9UHC1 1453 aa12.93□□□□□ -0.34
DEPDC5-220ENST00000494065 PLCD3Q8N3E9 789 aa12.93□□□□□ -0.34
DEPDC5-220ENST00000494065 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
DEPDC5-220ENST00000494065 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
DEPDC5-220ENST00000494065 SAMD9LQ8IVG5 1584 aa12.91□□□□□ -0.34
DEPDC5-220ENST00000494065 SYCP2Q9BX26 1530 aa12.91□□□□□ -0.34
DEPDC5-220ENST00000494065 MTUS2Q5JR59 1369 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms