RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 MAGI3Q5TCQ9 1506 aa9.97□□□□□ -0.81
FNDC3B-212ENST00000494000 ZBTB22O15209 634 aa9.97□□□□□ -0.81
FNDC3B-212ENST00000494000 PPP6R1Q9UPN7 881 aa9.97□□□□□ -0.81
FNDC3B-212ENST00000494000 ATP10BO94823 1461 aa9.96□□□□□ -0.81
FNDC3B-212ENST00000494000 PLEKHD1A6NEE1 506 aa9.96□□□□□ -0.81
FNDC3B-212ENST00000494000 ITSN2Q9NZM3 1697 aa9.96□□□□□ -0.81
FNDC3B-212ENST00000494000 TCOF1Q13428 1488 aaKnown RBP9.95□□□□□ -0.82
FNDC3B-212ENST00000494000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.95□□□□□ -0.82
FNDC3B-212ENST00000494000 HNRNPUL2Q1KMD3 747 aaKnown RBP9.95□□□□□ -0.82
FNDC3B-212ENST00000494000 TMEM132AQ24JP5 1023 aa9.95□□□□□ -0.82
FNDC3B-212ENST00000494000 KIF14Q15058 1648 aa9.95□□□□□ -0.82
FNDC3B-212ENST00000494000 ACIN1Q9UKV3 1341 aaKnown RBP9.95□□□□□ -0.82
FNDC3B-212ENST00000494000 SLC4A1APQ9BWU0 796 aaKnown RBP9.94□□□□□ -0.82
FNDC3B-212ENST00000494000 PTPN23Q9H3S7 1636 aa9.94□□□□□ -0.82
FNDC3B-212ENST00000494000 ERCC6L2Q5T890 1561 aa9.93□□□□□ -0.82
FNDC3B-212ENST00000494000 KDM5BQ9UGL1 1544 aa9.92□□□□□ -0.82
FNDC3B-212ENST00000494000 FAM50AQ14320 339 aaKnown RBP9.91□□□□□ -0.82
FNDC3B-212ENST00000494000 DHX37Q8IY37 1157 aaKnown RBP9.91□□□□□ -0.82
FNDC3B-212ENST00000494000 CLSPNQ9HAW4 1339 aa9.9□□□□□ -0.82
FNDC3B-212ENST00000494000 AKNAQ7Z591 1439 aa9.89□□□□□ -0.83
FNDC3B-212ENST00000494000 ZCCHC11Q5TAX3 1644 aaKnown RBP9.89□□□□□ -0.83
FNDC3B-212ENST00000494000 CCER1Q8TC90 406 aaPredicted RBP9.88□□□□□ -0.83
FNDC3B-212ENST00000494000 KDM2AQ9Y2K7 1162 aa9.88□□□□□ -0.83
FNDC3B-212ENST00000494000 ABCC10Q5T3U5 1492 aa9.88□□□□□ -0.83
FNDC3B-212ENST00000494000 SETD5Q9C0A6 1442 aa9.88□□□□□ -0.83
FNDC3B-212ENST00000494000 GPATCH8Q9UKJ3 1502 aaKnown RBP9.87□□□□□ -0.83
FNDC3B-212ENST00000494000 CHMP4AQ9BY43 222 aa9.87□□□□□ -0.83
FNDC3B-212ENST00000494000 PDIA4P13667 645 aaKnown RBP9.86□□□□□ -0.83
FNDC3B-212ENST00000494000 ARID3CA6NKF2 412 aa9.86□□□□□ -0.83
FNDC3B-212ENST00000494000 DNMT1P26358 1616 aaKnown RBP9.86□□□□□ -0.83
FNDC3B-212ENST00000494000 CDC42BPAQ5VT25 1732 aa9.85□□□□□ -0.83
FNDC3B-212ENST00000494000 CFDP1Q9UEE9 299 aaPredicted RBP9.85□□□□□ -0.83
FNDC3B-212ENST00000494000 ROCK1Q13464 1354 aa9.85□□□□□ -0.83
FNDC3B-212ENST00000494000 RSPH4AQ5TD94 716 aa9.85□□□□□ -0.83
FNDC3B-212ENST00000494000 HFM1A2PYH4 1435 aa9.84□□□□□ -0.83
FNDC3B-212ENST00000494000 PREX2Q70Z35 1606 aa9.84□□□□□ -0.83
FNDC3B-212ENST00000494000 ARAP3Q8WWN8 1544 aa9.84□□□□□ -0.83
FNDC3B-212ENST00000494000 PLEKHH2Q8IVE3 1493 aa9.84□□□□□ -0.83
FNDC3B-212ENST00000494000 NPM1P06748 294 aaKnown RBP eCLIP9.83□□□□□ -0.84
FNDC3B-212ENST00000494000 MYO5CQ9NQX4 1742 aa9.83□□□□□ -0.84
FNDC3B-212ENST00000494000 CAMSAP2Q08AD1 1489 aa9.83□□□□□ -0.84
FNDC3B-212ENST00000494000 ITGAEP38570 1179 aa9.82□□□□□ -0.84
FNDC3B-212ENST00000494000 GCC2Q8IWJ2 1684 aa9.82□□□□□ -0.84
FNDC3B-212ENST00000494000 ARHGEF5Q12774 1597 aa9.82□□□□□ -0.84
FNDC3B-212ENST00000494000 DAPK1P53355 1430 aa9.82□□□□□ -0.84
FNDC3B-212ENST00000494000 WDR7Q9Y4E6 1490 aa9.82□□□□□ -0.84
FNDC3B-212ENST00000494000 RAB3GAP2Q9H2M9 1393 aa9.81□□□□□ -0.84
FNDC3B-212ENST00000494000 SHANK2Q9UPX8 1470 aa9.81□□□□□ -0.84
FNDC3B-212ENST00000494000 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.81□□□□□ -0.84
FNDC3B-212ENST00000494000 ADGBQ8N7X0 1667 aa9.81□□□□□ -0.84
FNDC3B-212ENST00000494000 CROCC2H7BZ55 1655 aa9.8□□□□□ -0.84
FNDC3B-212ENST00000494000 ADGRL2O95490 1459 aa9.8□□□□□ -0.84
FNDC3B-212ENST00000494000 CDC42BPBQ9Y5S2 1711 aa9.79□□□□□ -0.84
FNDC3B-212ENST00000494000 ABCC5O15440 1437 aa9.79□□□□□ -0.84
FNDC3B-212ENST00000494000 PLCH2O75038 1416 aa9.79□□□□□ -0.84
FNDC3B-212ENST00000494000 KIAA1107Q9UPP5 1409 aa9.79□□□□□ -0.84
FNDC3B-212ENST00000494000 DHX57Q6P158 1386 aaKnown RBP9.79□□□□□ -0.84
FNDC3B-212ENST00000494000 NAIPQ13075 1403 aa9.79□□□□□ -0.84
FNDC3B-212ENST00000494000 PTPRKQ15262 1439 aa9.78□□□□□ -0.84
FNDC3B-212ENST00000494000 SAMD1Q6SPF0 538 aaPredicted RBP9.78□□□□□ -0.84
FNDC3B-212ENST00000494000 ABCA9Q8IUA7 1624 aa9.78□□□□□ -0.84
FNDC3B-212ENST00000494000 TTC37Q6PGP7 1564 aa9.78□□□□□ -0.84
FNDC3B-212ENST00000494000 ARHGAP5Q13017 1502 aa9.77□□□□□ -0.84
FNDC3B-212ENST00000494000 ANKRD30AQ9BXX3 1397 aa9.76□□□□□ -0.85
FNDC3B-212ENST00000494000 EFCAB2Q5VUJ9 269 aa9.76□□□□□ -0.85
FNDC3B-212ENST00000494000 ASXL2Q76L83 1435 aa9.76□□□□□ -0.85
FNDC3B-212ENST00000494000 MAST1Q9Y2H9 1570 aa9.76□□□□□ -0.85
FNDC3B-212ENST00000494000 CCDC141Q6ZP82 1450 aa9.76□□□□□ -0.85
FNDC3B-212ENST00000494000 RIMBP3CA6NJZ7 1639 aa9.76□□□□□ -0.85
FNDC3B-212ENST00000494000 RIMBP3BA6NNM3 1639 aa9.76□□□□□ -0.85
FNDC3B-212ENST00000494000 RIMBP3Q9UFD9 1639 aa9.76□□□□□ -0.85
FNDC3B-212ENST00000494000 SAMD9LQ8IVG5 1584 aa9.76□□□□□ -0.85
FNDC3B-212ENST00000494000 TSPY4P0CV99 314 aa9.75□□□□□ -0.85
FNDC3B-212ENST00000494000 TSPY10P0CW01 314 aa9.75□□□□□ -0.85
FNDC3B-212ENST00000494000 CFAP74Q9C0B2 1584 aa9.75□□□□□ -0.85
FNDC3B-212ENST00000494000 MAPKBP1O60336 1514 aa9.75□□□□□ -0.85
FNDC3B-212ENST00000494000 FOXD1Q16676 465 aa9.75□□□□□ -0.85
FNDC3B-212ENST00000494000 IGSF3O75054 1194 aa9.74□□□□□ -0.85
FNDC3B-212ENST00000494000 ZNF777Q9ULD5 760 aaPredicted RBP9.74□□□□□ -0.85
FNDC3B-212ENST00000494000 MBD5Q9P267 1494 aa9.74□□□□□ -0.85
FNDC3B-212ENST00000494000 NCOA1Q15788 1441 aa9.73□□□□□ -0.85
FNDC3B-212ENST00000494000 KCNH8Q96L42 1107 aa9.73□□□□□ -0.85
FNDC3B-212ENST00000494000 CFAP44Q96MT7 982 aa9.73□□□□□ -0.85
FNDC3B-212ENST00000494000 ZNF644Q9H582 1327 aaPredicted RBP9.73□□□□□ -0.85
FNDC3B-212ENST00000494000 C9orf84Q5VXU9 1444 aa9.73□□□□□ -0.85
FNDC3B-212ENST00000494000 ABCC1P33527 1531 aa9.72□□□□□ -0.85
FNDC3B-212ENST00000494000 ADRA2BP18089 450 aa9.71□□□□□ -0.85
FNDC3B-212ENST00000494000 UBE2Q2Q8WVN8 375 aa9.71□□□□□ -0.86
FNDC3B-212ENST00000494000 PLXNC1O60486 1568 aa9.71□□□□□ -0.86
FNDC3B-212ENST00000494000 SYCP2Q9BX26 1530 aa9.7□□□□□ -0.86
FNDC3B-212ENST00000494000 GLI2P10070 1586 aa9.7□□□□□ -0.86
FNDC3B-212ENST00000494000 RRP7BPQ9NSQ0 103 aa9.7□□□□□ -0.86
FNDC3B-212ENST00000494000 CHIC2Q9UKJ5 165 aa9.7□□□□□ -0.86
FNDC3B-212ENST00000494000 RTEL1-TNFRSF6BF6WH68 1400 aa9.7□□□□□ -0.86
FNDC3B-212ENST00000494000 FANCAO15360 1455 aa9.69□□□□□ -0.86
FNDC3B-212ENST00000494000 HNRNPMP52272 730 aaKnown RBP eCLIP9.68□□□□□ -0.86
FNDC3B-212ENST00000494000 ANKRD50Q9ULJ7 1429 aa9.67□□□□□ -0.86
FNDC3B-212ENST00000494000 NEO1Q92859 1461 aa9.67□□□□□ -0.86
FNDC3B-212ENST00000494000 PDE4CQ08493 712 aa9.67□□□□□ -0.86
FNDC3B-212ENST00000494000 CD109Q6YHK3 1445 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms