RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 NLRP6P59044 892 aa14.96□□□□□ -0.01
LRCH3-218ENST00000493726 MICALL2Q8IY33 904 aa14.95□□□□□ -0.02
LRCH3-218ENST00000493726 TMEM121BQ9BXQ6 578 aaPredicted RBP14.95□□□□□ -0.02
LRCH3-218ENST00000493726 ST18O60284 1047 aa14.94□□□□□ -0.02
LRCH3-218ENST00000493726 CHGAP10645 457 aaKnown RBP14.87□□□□□ -0.03
LRCH3-218ENST00000493726 TMEM92Q6UXU6 159 aa14.87□□□□□ -0.03
LRCH3-218ENST00000493726 SNPHO15079 494 aa14.86□□□□□ -0.03
LRCH3-218ENST00000493726 HS6ST3Q8IZP7 471 aa14.85□□□□□ -0.03
LRCH3-218ENST00000493726 PPP1R37O75864 691 aa14.78□□□□□ -0.04
LRCH3-218ENST00000493726 MARVELD3Q96A59 401 aa14.78□□□□□ -0.04
LRCH3-218ENST00000493726 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
LRCH3-218ENST00000493726 HOXB3P14651 431 aaPredicted RBP14.76□□□□□ -0.05
LRCH3-218ENST00000493726 DNAJC5Q9H3Z4 198 aa14.74□□□□□ -0.05
LRCH3-218ENST00000493726 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
LRCH3-218ENST00000493726 NKX1-1Q15270 411 aaPredicted RBP14.72□□□□□ -0.05
LRCH3-218ENST00000493726 PEG3Q9GZU2 1588 aa14.7□□□□□ -0.06
LRCH3-218ENST00000493726 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
LRCH3-218ENST00000493726 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
LRCH3-218ENST00000493726 PLSCR2Q9NRY7 297 aa14.68□□□□□ -0.06
LRCH3-218ENST00000493726 HMGXB3Q12766 1538 aa14.67□□□□□ -0.06
LRCH3-218ENST00000493726 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
LRCH3-218ENST00000493726 CDAN1Q8IWY9 1227 aa14.66□□□□□ -0.06
LRCH3-218ENST00000493726 ZNF710Q8N1W2 664 aa14.66□□□□□ -0.06
LRCH3-218ENST00000493726 EMP3P54852 163 aa14.65□□□□□ -0.06
LRCH3-218ENST00000493726 DOK7Q18PE1 504 aa14.65□□□□□ -0.06
LRCH3-218ENST00000493726 C2orf72A6NCS6 295 aa14.63□□□□□ -0.07
LRCH3-218ENST00000493726 PCDH10Q9P2E7 1040 aa14.63□□□□□ -0.07
LRCH3-218ENST00000493726 KIF3CO14782 793 aa14.6□□□□□ -0.07
LRCH3-218ENST00000493726 FAM205CA6NFA0 338 aa14.59□□□□□ -0.07
LRCH3-218ENST00000493726 MROH2BQ7Z745 1585 aa14.57□□□□□ -0.08
LRCH3-218ENST00000493726 POTEB3A0JP26 581 aa14.57□□□□□ -0.08
LRCH3-218ENST00000493726 HOXB1P14653 301 aaPredicted RBP14.57□□□□□ -0.08
LRCH3-218ENST00000493726 POTEBQ6S5H4 581 aa14.57□□□□□ -0.08
LRCH3-218ENST00000493726 RIMBP2O15034 1052 aa14.56□□□□□ -0.08
LRCH3-218ENST00000493726 TMC2Q8TDI7 906 aa14.55□□□□□ -0.08
LRCH3-218ENST00000493726 HS3ST6Q96QI5 342 aa14.55□□□□□ -0.08
LRCH3-218ENST00000493726 RTN4Q9NQC3 1192 aaKnown RBP14.53□□□□□ -0.08
LRCH3-218ENST00000493726 GPR153Q6NV75 609 aa14.51□□□□□ -0.09
LRCH3-218ENST00000493726 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
LRCH3-218ENST00000493726 GTPBP6O43824 516 aaPredicted RBP14.5□□□□□ -0.09
LRCH3-218ENST00000493726 ARSIQ5FYB1 569 aa14.5□□□□□ -0.09
LRCH3-218ENST00000493726 KHSRPQ92945 711 aaKnown RBP eCLIP14.5□□□□□ -0.09
LRCH3-218ENST00000493726 AMER1Q5JTC6 1135 aaPredicted RBP14.49□□□□□ -0.09
LRCH3-218ENST00000493726 ZSWIM6Q9HCJ5 1215 aa14.48□□□□□ -0.09
LRCH3-218ENST00000493726 ERBB3P21860 1342 aa14.47□□□□□ -0.09
LRCH3-218ENST00000493726 RYDENQ9NUL5 291 aaKnown RBP14.47□□□□□ -0.09
LRCH3-218ENST00000493726 VARS2Q5ST30 1063 aaKnown RBP14.42□□□□□ -0.1
LRCH3-218ENST00000493726 GPHNQ9NQX3 736 aaPredicted RBP14.41□□□□□ -0.1
LRCH3-218ENST00000493726 DSG2Q14126 1118 aa14.39□□□□□ -0.11
LRCH3-218ENST00000493726 PLPP6Q8IY26 295 aa14.39□□□□□ -0.11
LRCH3-218ENST00000493726 NUDT7P0C024 238 aa14.38□□□□□ -0.11
LRCH3-218ENST00000493726 KRTAP3-3Q9BYR6 98 aa14.38□□□□□ -0.11
LRCH3-218ENST00000493726 KRTAP3-2Q9BYR7 98 aa14.38□□□□□ -0.11
LRCH3-218ENST00000493726 FOXK1P85037 733 aa14.37□□□□□ -0.11
LRCH3-218ENST00000493726 PCDHGA4Q9Y5G9 962 aa14.37□□□□□ -0.11
LRCH3-218ENST00000493726 WIZO95785 1651 aa14.36□□□□□ -0.11
LRCH3-218ENST00000493726 LAMC3Q9Y6N6 1575 aa14.36□□□□□ -0.11
LRCH3-218ENST00000493726 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
LRCH3-218ENST00000493726 SLC34A2O95436 690 aa14.35□□□□□ -0.11
LRCH3-218ENST00000493726 NESP48681 1621 aa14.33□□□□□ -0.11
LRCH3-218ENST00000493726 CUX2O14529 1486 aa14.33□□□□□ -0.12
LRCH3-218ENST00000493726 NCKAP5LQ9HCH0 1330 aa14.33□□□□□ -0.12
LRCH3-218ENST00000493726 CRISPLD2Q9H0B8 497 aa14.32□□□□□ -0.12
LRCH3-218ENST00000493726 ZNF316A6NFI3 1004 aaPredicted RBP14.31□□□□□ -0.12
LRCH3-218ENST00000493726 SPNS2Q8IVW8 549 aa14.29□□□□□ -0.12
LRCH3-218ENST00000493726 BBXQ8WY36 941 aaPredicted RBP14.29□□□□□ -0.12
LRCH3-218ENST00000493726 LHX6Q9UPM6 363 aa14.27□□□□□ -0.13
LRCH3-218ENST00000493726 TOP2AP11388 1531 aaKnown RBP14.26□□□□□ -0.13
LRCH3-218ENST00000493726 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
LRCH3-218ENST00000493726 PPP1R15BQ5SWA1 713 aa14.26□□□□□ -0.13
LRCH3-218ENST00000493726 CADPS2Q86UW7 1296 aa14.26□□□□□ -0.13
LRCH3-218ENST00000493726 CADPSQ9ULU8 1353 aa14.25□□□□□ -0.13
LRCH3-218ENST00000493726 PDE4AP27815 886 aa14.25□□□□□ -0.13
LRCH3-218ENST00000493726 ZNF687Q8N1G0 1237 aa14.25□□□□□ -0.13
LRCH3-218ENST00000493726 PTCD2Q8WV60 388 aaKnown RBP14.25□□□□□ -0.13
LRCH3-218ENST00000493726 THOC2Q8NI27 1593 aaKnown RBP14.25□□□□□ -0.13
LRCH3-218ENST00000493726 LARP6Q9BRS8 491 aaKnown RBP14.24□□□□□ -0.13
LRCH3-218ENST00000493726 UPF1Q92900 1129 aaKnown RBP eCLIP14.23□□□□□ -0.13
LRCH3-218ENST00000493726 PDS5BQ9NTI5 1447 aa14.21□□□□□ -0.13
LRCH3-218ENST00000493726 MMRN1Q13201 1228 aa14.2□□□□□ -0.14
LRCH3-218ENST00000493726 KIF21AQ7Z4S6 1674 aa14.19□□□□□ -0.14
LRCH3-218ENST00000493726 CFTRP13569 1480 aa14.18□□□□□ -0.14
LRCH3-218ENST00000493726 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
LRCH3-218ENST00000493726 DDX27Q96GQ7 796 aaKnown RBP14.17□□□□□ -0.14
LRCH3-218ENST00000493726 OXER1Q8TDS5 423 aa14.16□□□□□ -0.14
LRCH3-218ENST00000493726 TBC1D12O60347 775 aa14.15□□□□□ -0.14
LRCH3-218ENST00000493726 SPRYD3Q8NCJ5 442 aa14.14□□□□□ -0.15
LRCH3-218ENST00000493726 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.14□□□□□ -0.15
LRCH3-218ENST00000493726 MFSD10Q14728 455 aa14.13□□□□□ -0.15
LRCH3-218ENST00000493726 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
LRCH3-218ENST00000493726 AXIN2Q9Y2T1 843 aa14.13□□□□□ -0.15
LRCH3-218ENST00000493726 POTEEQ6S8J3 1075 aa14.12□□□□□ -0.15
LRCH3-218ENST00000493726 WDR62O43379 1518 aa14.11□□□□□ -0.15
LRCH3-218ENST00000493726 PAXIP1Q6ZW49 1069 aaPredicted RBP14.11□□□□□ -0.15
LRCH3-218ENST00000493726 ANKRD13DQ6ZTN6 518 aa14.09□□□□□ -0.15
LRCH3-218ENST00000493726 MRC2Q9UBG0 1479 aa14.09□□□□□ -0.15
LRCH3-218ENST00000493726 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
LRCH3-218ENST00000493726 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
LRCH3-218ENST00000493726 EMILIN3Q9NT22 766 aa14.06□□□□□ -0.16
LRCH3-218ENST00000493726 PRDM2Q13029 1718 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms