RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 ARID3CA6NKF2 412 aa10.79□□□□□ -0.68
SMARCE1-211ENST00000493660 ABCC10Q5T3U5 1492 aa10.79□□□□□ -0.68
SMARCE1-211ENST00000493660 PREX2Q70Z35 1606 aa10.78□□□□□ -0.68
SMARCE1-211ENST00000493660 MYO5CQ9NQX4 1742 aa10.77□□□□□ -0.68
SMARCE1-211ENST00000493660 WDR7Q9Y4E6 1490 aa10.76□□□□□ -0.69
SMARCE1-211ENST00000493660 GPATCH8Q9UKJ3 1502 aaKnown RBP10.75□□□□□ -0.69
SMARCE1-211ENST00000493660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMARCE1-211ENST00000493660 TTC37Q6PGP7 1564 aa10.75□□□□□ -0.69
SMARCE1-211ENST00000493660 CDC42BPBQ9Y5S2 1711 aa10.75□□□□□ -0.69
SMARCE1-211ENST00000493660 ABCA9Q8IUA7 1624 aa10.74□□□□□ -0.69
SMARCE1-211ENST00000493660 MAPKBP1O60336 1514 aa10.73□□□□□ -0.69
SMARCE1-211ENST00000493660 ARAP3Q8WWN8 1544 aa10.73□□□□□ -0.69
SMARCE1-211ENST00000493660 GTF3C3Q9Y5Q9 886 aa10.73□□□□□ -0.69
SMARCE1-211ENST00000493660 DNMT1P26358 1616 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-211ENST00000493660 CROCC2H7BZ55 1655 aa10.72□□□□□ -0.69
SMARCE1-211ENST00000493660 ASXL2Q76L83 1435 aa10.72□□□□□ -0.69
SMARCE1-211ENST00000493660 NPM1P06748 294 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMARCE1-211ENST00000493660 CAMSAP2Q08AD1 1489 aa10.71□□□□□ -0.7
SMARCE1-211ENST00000493660 NEUROD1Q13562 356 aa10.7□□□□□ -0.7
SMARCE1-211ENST00000493660 FAM50AQ14320 339 aaKnown RBP10.7□□□□□ -0.7
SMARCE1-211ENST00000493660 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
SMARCE1-211ENST00000493660 ARHGEF5Q12774 1597 aa10.69□□□□□ -0.7
SMARCE1-211ENST00000493660 ANP32EQ9BTT0 268 aa10.69□□□□□ -0.7
SMARCE1-211ENST00000493660 SAMD9LQ8IVG5 1584 aa10.68□□□□□ -0.7
SMARCE1-211ENST00000493660 GCC2Q8IWJ2 1684 aa10.68□□□□□ -0.7
SMARCE1-211ENST00000493660 PLEKHH2Q8IVE3 1493 aa10.68□□□□□ -0.7
SMARCE1-211ENST00000493660 CFDP1Q9UEE9 299 aaPredicted RBP10.68□□□□□ -0.7
SMARCE1-211ENST00000493660 PLCH2O75038 1416 aa10.68□□□□□ -0.7
SMARCE1-211ENST00000493660 AKNAQ7Z591 1439 aa10.68□□□□□ -0.7
SMARCE1-211ENST00000493660 ARHGAP5Q13017 1502 aa10.67□□□□□ -0.7
SMARCE1-211ENST00000493660 CFAP74Q9C0B2 1584 aa10.67□□□□□ -0.7
SMARCE1-211ENST00000493660 GLI2P10070 1586 aa10.67□□□□□ -0.7
SMARCE1-211ENST00000493660 DAPK1P53355 1430 aa10.66□□□□□ -0.7
SMARCE1-211ENST00000493660 CYB5RLQ6IPT4 315 aa10.66□□□□□ -0.7
SMARCE1-211ENST00000493660 SHANK2Q9UPX8 1470 aa10.66□□□□□ -0.7
SMARCE1-211ENST00000493660 KIAA1107Q9UPP5 1409 aa10.64□□□□□ -0.71
SMARCE1-211ENST00000493660 MAP3K4Q9Y6R4 1608 aa10.64□□□□□ -0.71
SMARCE1-211ENST00000493660 ABCC1P33527 1531 aa10.64□□□□□ -0.71
SMARCE1-211ENST00000493660 ABCC5O15440 1437 aa10.64□□□□□ -0.71
SMARCE1-211ENST00000493660 PTPRKQ15262 1439 aa10.64□□□□□ -0.71
SMARCE1-211ENST00000493660 MAST1Q9Y2H9 1570 aa10.63□□□□□ -0.71
SMARCE1-211ENST00000493660 ROCK1Q13464 1354 aa10.63□□□□□ -0.71
SMARCE1-211ENST00000493660 KCNH8Q96L42 1107 aa10.63□□□□□ -0.71
SMARCE1-211ENST00000493660 HFM1A2PYH4 1435 aa10.63□□□□□ -0.71
SMARCE1-211ENST00000493660 ADGRL2O95490 1459 aa10.63□□□□□ -0.71
SMARCE1-211ENST00000493660 SETD5Q9C0A6 1442 aa10.63□□□□□ -0.71
SMARCE1-211ENST00000493660 DIP2BQ9P265 1576 aa10.62□□□□□ -0.71
SMARCE1-211ENST00000493660 CCDC141Q6ZP82 1450 aa10.62□□□□□ -0.71
SMARCE1-211ENST00000493660 MBD5Q9P267 1494 aa10.62□□□□□ -0.71
SMARCE1-211ENST00000493660 ITGAEP38570 1179 aa10.61□□□□□ -0.71
SMARCE1-211ENST00000493660 RSPH4AQ5TD94 716 aa10.61□□□□□ -0.71
SMARCE1-211ENST00000493660 SYCP2Q9BX26 1530 aa10.61□□□□□ -0.71
SMARCE1-211ENST00000493660 EFCAB2Q5VUJ9 269 aa10.61□□□□□ -0.71
SMARCE1-211ENST00000493660 ZNF644Q9H582 1327 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-211ENST00000493660 NAIPQ13075 1403 aa10.6□□□□□ -0.71
SMARCE1-211ENST00000493660 FANCAO15360 1455 aa10.59□□□□□ -0.71
SMARCE1-211ENST00000493660 ZNF777Q9ULD5 760 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-211ENST00000493660 CD109Q6YHK3 1445 aa10.59□□□□□ -0.71
SMARCE1-211ENST00000493660 PLXNC1O60486 1568 aa10.58□□□□□ -0.72
SMARCE1-211ENST00000493660 RAB3GAP2Q9H2M9 1393 aa10.58□□□□□ -0.72
SMARCE1-211ENST00000493660 KIF13AQ9H1H9 1805 aa10.58□□□□□ -0.72
SMARCE1-211ENST00000493660 C9orf84Q5VXU9 1444 aa10.58□□□□□ -0.72
SMARCE1-211ENST00000493660 NEO1Q92859 1461 aa10.58□□□□□ -0.72
SMARCE1-211ENST00000493660 ARHGEF12Q9NZN5 1544 aa10.57□□□□□ -0.72
SMARCE1-211ENST00000493660 ANKRD30AQ9BXX3 1397 aa10.56□□□□□ -0.72
SMARCE1-211ENST00000493660 NCOA1Q15788 1441 aa10.56□□□□□ -0.72
SMARCE1-211ENST00000493660 ADGRL1O94910 1474 aa10.55□□□□□ -0.72
SMARCE1-211ENST00000493660 PPRC1Q5VV67 1664 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-211ENST00000493660 INO80Q9ULG1 1556 aaPredicted RBP10.54□□□□□ -0.72
SMARCE1-211ENST00000493660 TSPY4P0CV99 314 aa10.54□□□□□ -0.72
SMARCE1-211ENST00000493660 TSPY10P0CW01 314 aa10.54□□□□□ -0.72
SMARCE1-211ENST00000493660 HNRNPMP52272 730 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMARCE1-211ENST00000493660 RTEL1-TNFRSF6BF6WH68 1400 aa10.54□□□□□ -0.72
SMARCE1-211ENST00000493660 CLSPNQ9HAW4 1339 aa10.53□□□□□ -0.72
SMARCE1-211ENST00000493660 TEX14Q8IWB6 1497 aa10.53□□□□□ -0.72
SMARCE1-211ENST00000493660 DAXXQ9UER7 740 aaPredicted RBP10.53□□□□□ -0.72
SMARCE1-211ENST00000493660 ZFYVE16Q7Z3T8 1539 aa10.52□□□□□ -0.72
SMARCE1-211ENST00000493660 DHX57Q6P158 1386 aaKnown RBP10.52□□□□□ -0.72
SMARCE1-211ENST00000493660 KDM6BO15054 1643 aa10.52□□□□□ -0.72
SMARCE1-211ENST00000493660 KDM5CP41229 1560 aa10.52□□□□□ -0.73
SMARCE1-211ENST00000493660 CCER1Q8TC90 406 aaPredicted RBP10.52□□□□□ -0.73
SMARCE1-211ENST00000493660 CHIC2Q9UKJ5 165 aa10.52□□□□□ -0.73
SMARCE1-211ENST00000493660 ZNF518AQ6AHZ1 1483 aa10.52□□□□□ -0.73
SMARCE1-211ENST00000493660 TRAPPC8Q9Y2L5 1435 aa10.52□□□□□ -0.73
SMARCE1-211ENST00000493660 SCAPERQ9BY12 1400 aa10.51□□□□□ -0.73
SMARCE1-211ENST00000493660 RICTORQ6R327 1708 aa10.51□□□□□ -0.73
SMARCE1-211ENST00000493660 ATP7AQ04656 1500 aa10.51□□□□□ -0.73
SMARCE1-211ENST00000493660 DUOX2Q9NRD8 1548 aa10.51□□□□□ -0.73
SMARCE1-211ENST00000493660 TSPOAP1O95153 1857 aa10.5□□□□□ -0.73
SMARCE1-211ENST00000493660 RRP7BPQ9NSQ0 103 aa10.5□□□□□ -0.73
SMARCE1-211ENST00000493660 POGZQ7Z3K3 1410 aa10.5□□□□□ -0.73
SMARCE1-211ENST00000493660 HECW2Q9P2P5 1572 aa10.49□□□□□ -0.73
SMARCE1-211ENST00000493660 KIF15Q9NS87 1388 aa10.49□□□□□ -0.73
SMARCE1-211ENST00000493660 KIDINS220Q9ULH0 1771 aa10.49□□□□□ -0.73
SMARCE1-211ENST00000493660 KDM5DQ9BY66 1539 aa10.49□□□□□ -0.73
SMARCE1-211ENST00000493660 FAM69CQ0P6D2 419 aa10.49□□□□□ -0.73
SMARCE1-211ENST00000493660 ANKRD50Q9ULJ7 1429 aa10.49□□□□□ -0.73
SMARCE1-211ENST00000493660 UNC13BO14795 1591 aa10.48□□□□□ -0.73
SMARCE1-211ENST00000493660 EIF2AK4Q9P2K8 1649 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-211ENST00000493660 ERBINQ96RT1 1412 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms