RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 CFAP74Q9C0B2 1584 aa11.07□□□□□ -0.64
TOP3A-207ENST00000493648 MYO5CQ9NQX4 1742 aa11.06□□□□□ -0.64
TOP3A-207ENST00000493648 DENND4BO75064 1496 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-207ENST00000493648 MTUS2Q5JR59 1369 aa11.04□□□□□ -0.64
TOP3A-207ENST00000493648 SCAPERQ9BY12 1400 aa11.03□□□□□ -0.64
TOP3A-207ENST00000493648 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
TOP3A-207ENST00000493648 ARHGAP5Q13017 1502 aa11.03□□□□□ -0.64
TOP3A-207ENST00000493648 VPS8Q8N3P4 1428 aa11.02□□□□□ -0.64
TOP3A-207ENST00000493648 ADGRL1O94910 1474 aa11.02□□□□□ -0.65
TOP3A-207ENST00000493648 CCNB3Q8WWL7 1395 aa11.01□□□□□ -0.65
TOP3A-207ENST00000493648 CDC42BPBQ9Y5S2 1711 aa11.01□□□□□ -0.65
TOP3A-207ENST00000493648 APLP2Q06481 763 aa11□□□□□ -0.65
TOP3A-207ENST00000493648 CFDP1Q9UEE9 299 aaPredicted RBP11□□□□□ -0.65
TOP3A-207ENST00000493648 ZNF777Q9ULD5 760 aaPredicted RBP11□□□□□ -0.65
TOP3A-207ENST00000493648 RICTORQ6R327 1708 aa10.99□□□□□ -0.65
TOP3A-207ENST00000493648 MYT1LQ9UL68 1186 aa10.99□□□□□ -0.65
TOP3A-207ENST00000493648 FRMPD1Q5SYB0 1578 aa10.99□□□□□ -0.65
TOP3A-207ENST00000493648 PREX2Q70Z35 1606 aa10.98□□□□□ -0.65
TOP3A-207ENST00000493648 AFAP1Q8N556 730 aa10.98□□□□□ -0.65
TOP3A-207ENST00000493648 ARID4BQ4LE39 1312 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-207ENST00000493648 MAGI2Q86UL8 1455 aa10.98□□□□□ -0.65
TOP3A-207ENST00000493648 EHBP1L1Q8N3D4 1523 aa10.98□□□□□ -0.65
TOP3A-207ENST00000493648 GPATCH8Q9UKJ3 1502 aaKnown RBP10.98□□□□□ -0.65
TOP3A-207ENST00000493648 CDC42BPAQ5VT25 1732 aa10.98□□□□□ -0.65
TOP3A-207ENST00000493648 POGZQ7Z3K3 1410 aa10.97□□□□□ -0.65
TOP3A-207ENST00000493648 TIAM1Q13009 1591 aa10.96□□□□□ -0.65
TOP3A-207ENST00000493648 ZNF518AQ6AHZ1 1483 aa10.96□□□□□ -0.65
TOP3A-207ENST00000493648 MAP3K1Q13233 1512 aa10.95□□□□□ -0.66
TOP3A-207ENST00000493648 ZMYM4Q5VZL5 1548 aa10.95□□□□□ -0.66
TOP3A-207ENST00000493648 ZFYVE16Q7Z3T8 1539 aa10.94□□□□□ -0.66
TOP3A-207ENST00000493648 HNRNPMP52272 730 aaKnown RBP eCLIP10.94□□□□□ -0.66
TOP3A-207ENST00000493648 SUPT6HQ7KZ85 1726 aaKnown RBP10.94□□□□□ -0.66
TOP3A-207ENST00000493648 PLEKHH2Q8IVE3 1493 aa10.93□□□□□ -0.66
TOP3A-207ENST00000493648 KANK4Q5T7N3 995 aaPredicted RBP10.93□□□□□ -0.66
TOP3A-207ENST00000493648 ABCC1P33527 1531 aa10.93□□□□□ -0.66
TOP3A-207ENST00000493648 ATP10AO60312 1499 aa10.93□□□□□ -0.66
TOP3A-207ENST00000493648 LRRC9Q6ZRR7 1453 aa10.93□□□□□ -0.66
TOP3A-207ENST00000493648 YEATS2Q9ULM3 1422 aa10.92□□□□□ -0.66
TOP3A-207ENST00000493648 TRAPPC8Q9Y2L5 1435 aa10.92□□□□□ -0.66
TOP3A-207ENST00000493648 ARHGEF40Q8TER5 1519 aa10.92□□□□□ -0.66
TOP3A-207ENST00000493648 ARHGEF12Q9NZN5 1544 aa10.92□□□□□ -0.66
TOP3A-207ENST00000493648 NCOA2Q15596 1464 aa10.92□□□□□ -0.66
TOP3A-207ENST00000493648 KIAA1107Q9UPP5 1409 aa10.92□□□□□ -0.66
TOP3A-207ENST00000493648 ITSN2Q9NZM3 1697 aa10.92□□□□□ -0.66
TOP3A-207ENST00000493648 MLH3Q9UHC1 1453 aa10.91□□□□□ -0.66
TOP3A-207ENST00000493648 KDM5CP41229 1560 aa10.9□□□□□ -0.66
TOP3A-207ENST00000493648 SAMD9LQ8IVG5 1584 aa10.9□□□□□ -0.66
TOP3A-207ENST00000493648 SPAG9O60271 1321 aaKnown RBP10.9□□□□□ -0.66
TOP3A-207ENST00000493648 ZNF644Q9H582 1327 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-207ENST00000493648 RSPH4AQ5TD94 716 aa10.9□□□□□ -0.66
TOP3A-207ENST00000493648 MLECQ14165 292 aa10.89□□□□□ -0.67
TOP3A-207ENST00000493648 C9orf84Q5VXU9 1444 aa10.89□□□□□ -0.67
TOP3A-207ENST00000493648 HECW2Q9P2P5 1572 aa10.89□□□□□ -0.67
TOP3A-207ENST00000493648 SYCP2Q9BX26 1530 aa10.89□□□□□ -0.67
TOP3A-207ENST00000493648 BCORL1Q5H9F3 1711 aa10.88□□□□□ -0.67
TOP3A-207ENST00000493648 ADAMTSL3P82987 1691 aa10.87□□□□□ -0.67
TOP3A-207ENST00000493648 TSPY4P0CV99 314 aa10.85□□□□□ -0.67
TOP3A-207ENST00000493648 TSPY10P0CW01 314 aa10.85□□□□□ -0.67
TOP3A-207ENST00000493648 DIP2CQ9Y2E4 1556 aa10.85□□□□□ -0.67
TOP3A-207ENST00000493648 KIDINS220Q9ULH0 1771 aa10.85□□□□□ -0.67
TOP3A-207ENST00000493648 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
TOP3A-207ENST00000493648 CAMSAP2Q08AD1 1489 aa10.84□□□□□ -0.67
TOP3A-207ENST00000493648 MBD5Q9P267 1494 aa10.84□□□□□ -0.67
TOP3A-207ENST00000493648 ABCA6Q8N139 1617 aa10.84□□□□□ -0.67
TOP3A-207ENST00000493648 MIA2Q96PC5 1412 aa10.84□□□□□ -0.67
TOP3A-207ENST00000493648 PTPRMP28827 1452 aa10.83□□□□□ -0.68
TOP3A-207ENST00000493648 ESF1Q9H501 851 aaKnown RBP10.83□□□□□ -0.68
TOP3A-207ENST00000493648 SIGLEC1Q9BZZ2 1709 aa10.83□□□□□ -0.68
TOP3A-207ENST00000493648 RTEL1-TNFRSF6BF6WH68 1400 aa10.83□□□□□ -0.68
TOP3A-207ENST00000493648 REREQ9P2R6 1566 aa10.82□□□□□ -0.68
TOP3A-207ENST00000493648 MADDQ8WXG6 1647 aa10.82□□□□□ -0.68
TOP3A-207ENST00000493648 ATP7AQ04656 1500 aa10.82□□□□□ -0.68
TOP3A-207ENST00000493648 CCDC141Q6ZP82 1450 aa10.81□□□□□ -0.68
TOP3A-207ENST00000493648 AGLP35573 1532 aa10.81□□□□□ -0.68
TOP3A-207ENST00000493648 RIMS1Q86UR5 1692 aaKnown RBP10.81□□□□□ -0.68
TOP3A-207ENST00000493648 INO80Q9ULG1 1556 aaPredicted RBP10.8□□□□□ -0.68
TOP3A-207ENST00000493648 A2MP01023 1474 aa10.8□□□□□ -0.68
TOP3A-207ENST00000493648 ARHGEF5Q12774 1597 aa10.79□□□□□ -0.68
TOP3A-207ENST00000493648 FER1L4A9Z1Z3 1794 aa10.79□□□□□ -0.68
TOP3A-207ENST00000493648 GGT6Q6P531 493 aa10.78□□□□□ -0.68
TOP3A-207ENST00000493648 ADGBQ8N7X0 1667 aa10.78□□□□□ -0.68
TOP3A-207ENST00000493648 DHX29Q7Z478 1369 aaKnown RBP10.77□□□□□ -0.68
TOP3A-207ENST00000493648 FGD6Q6ZV73 1430 aa10.76□□□□□ -0.69
TOP3A-207ENST00000493648 CEBPAP49715 358 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-207ENST00000493648 PTPN23Q9H3S7 1636 aa10.76□□□□□ -0.69
TOP3A-207ENST00000493648 KIF3BO15066 747 aa10.75□□□□□ -0.69
TOP3A-207ENST00000493648 CNTLNQ9NXG0 1405 aa10.75□□□□□ -0.69
TOP3A-207ENST00000493648 PLXNC1O60486 1568 aa10.74□□□□□ -0.69
TOP3A-207ENST00000493648 FAM50AQ14320 339 aaKnown RBP10.74□□□□□ -0.69
TOP3A-207ENST00000493648 TCOF1Q13428 1488 aaKnown RBP10.74□□□□□ -0.69
TOP3A-207ENST00000493648 MAST1Q9Y2H9 1570 aa10.73□□□□□ -0.69
TOP3A-207ENST00000493648 PPARGC1BQ86YN6 1023 aaKnown RBP10.73□□□□□ -0.69
TOP3A-207ENST00000493648 SETD1BQ9UPS6 1966 aaKnown RBP10.72□□□□□ -0.69
TOP3A-207ENST00000493648 ZMYM3Q14202 1370 aa10.72□□□□□ -0.69
TOP3A-207ENST00000493648 ABCC5O15440 1437 aa10.72□□□□□ -0.69
TOP3A-207ENST00000493648 DAPK1P53355 1430 aa10.71□□□□□ -0.69
TOP3A-207ENST00000493648 RRP7BPQ9NSQ0 103 aa10.71□□□□□ -0.69
TOP3A-207ENST00000493648 CHIC2Q9UKJ5 165 aa10.71□□□□□ -0.69
TOP3A-207ENST00000493648 WASHC2CQ9Y4E1 1318 aa10.7□□□□□ -0.7
TOP3A-207ENST00000493648 C3P01024 1663 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms