RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 VPS8Q8N3P4 1428 aa14.94□□□□□ -0.02
SGIP1-213ENST00000493564 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
SGIP1-213ENST00000493564 ARID4BQ4LE39 1312 aaPredicted RBP14.93□□□□□ -0.02
SGIP1-213ENST00000493564 FRMPD1Q5SYB0 1578 aa14.93□□□□□ -0.02
SGIP1-213ENST00000493564 CFAP74Q9C0B2 1584 aa14.93□□□□□ -0.02
SGIP1-213ENST00000493564 CFDP1Q9UEE9 299 aaPredicted RBP14.92□□□□□ -0.02
SGIP1-213ENST00000493564 CDC42BPBQ9Y5S2 1711 aa14.92□□□□□ -0.02
SGIP1-213ENST00000493564 CCNB3Q8WWL7 1395 aa14.91□□□□□ -0.02
SGIP1-213ENST00000493564 KANK4Q5T7N3 995 aaPredicted RBP14.91□□□□□ -0.02
SGIP1-213ENST00000493564 GPATCH8Q9UKJ3 1502 aaKnown RBP14.91□□□□□ -0.02
SGIP1-213ENST00000493564 HNRNPMP52272 730 aaKnown RBP eCLIP14.9□□□□□ -0.02
SGIP1-213ENST00000493564 RICTORQ6R327 1708 aa14.89□□□□□ -0.03
SGIP1-213ENST00000493564 POGZQ7Z3K3 1410 aa14.89□□□□□ -0.03
SGIP1-213ENST00000493564 YEATS2Q9ULM3 1422 aa14.89□□□□□ -0.03
SGIP1-213ENST00000493564 CDC42BPAQ5VT25 1732 aa14.88□□□□□ -0.03
SGIP1-213ENST00000493564 ZNF644Q9H582 1327 aaPredicted RBP14.88□□□□□ -0.03
SGIP1-213ENST00000493564 APLP2Q06481 763 aa14.87□□□□□ -0.03
SGIP1-213ENST00000493564 PREX2Q70Z35 1606 aa14.87□□□□□ -0.03
SGIP1-213ENST00000493564 ARHGEF12Q9NZN5 1544 aa14.87□□□□□ -0.03
SGIP1-213ENST00000493564 TRAPPC8Q9Y2L5 1435 aa14.86□□□□□ -0.03
SGIP1-213ENST00000493564 MLECQ14165 292 aa14.86□□□□□ -0.03
SGIP1-213ENST00000493564 EHBP1L1Q8N3D4 1523 aa14.85□□□□□ -0.03
SGIP1-213ENST00000493564 TIAM1Q13009 1591 aa14.85□□□□□ -0.03
SGIP1-213ENST00000493564 ZFYVE16Q7Z3T8 1539 aa14.83□□□□□ -0.04
SGIP1-213ENST00000493564 NCOA2Q15596 1464 aa14.82□□□□□ -0.04
SGIP1-213ENST00000493564 ZNF518AQ6AHZ1 1483 aa14.82□□□□□ -0.04
SGIP1-213ENST00000493564 LRRC9Q6ZRR7 1453 aa14.82□□□□□ -0.04
SGIP1-213ENST00000493564 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
SGIP1-213ENST00000493564 MAGI2Q86UL8 1455 aa14.82□□□□□ -0.04
SGIP1-213ENST00000493564 ZMYM4Q5VZL5 1548 aa14.82□□□□□ -0.04
SGIP1-213ENST00000493564 SAMD9LQ8IVG5 1584 aa14.81□□□□□ -0.04
SGIP1-213ENST00000493564 ABCC1P33527 1531 aa14.81□□□□□ -0.04
SGIP1-213ENST00000493564 ARHGEF40Q8TER5 1519 aa14.81□□□□□ -0.04
SGIP1-213ENST00000493564 ATP10AO60312 1499 aa14.8□□□□□ -0.04
SGIP1-213ENST00000493564 SPAG9O60271 1321 aaKnown RBP14.79□□□□□ -0.04
SGIP1-213ENST00000493564 SYCP2Q9BX26 1530 aa14.79□□□□□ -0.04
SGIP1-213ENST00000493564 SUPT6HQ7KZ85 1726 aaKnown RBP14.78□□□□□ -0.04
SGIP1-213ENST00000493564 ITSN2Q9NZM3 1697 aa14.77□□□□□ -0.04
SGIP1-213ENST00000493564 KDM5CP41229 1560 aa14.77□□□□□ -0.05
SGIP1-213ENST00000493564 MAP3K1Q13233 1512 aa14.76□□□□□ -0.05
SGIP1-213ENST00000493564 KIAA1107Q9UPP5 1409 aa14.76□□□□□ -0.05
SGIP1-213ENST00000493564 SIGLEC1Q9BZZ2 1709 aa14.76□□□□□ -0.05
SGIP1-213ENST00000493564 MLH3Q9UHC1 1453 aa14.76□□□□□ -0.05
SGIP1-213ENST00000493564 C9orf84Q5VXU9 1444 aa14.75□□□□□ -0.05
SGIP1-213ENST00000493564 PLEKHH2Q8IVE3 1493 aa14.75□□□□□ -0.05
SGIP1-213ENST00000493564 HECW2Q9P2P5 1572 aa14.74□□□□□ -0.05
SGIP1-213ENST00000493564 BCORL1Q5H9F3 1711 aa14.74□□□□□ -0.05
SGIP1-213ENST00000493564 PPARGC1BQ86YN6 1023 aaKnown RBP14.73□□□□□ -0.05
SGIP1-213ENST00000493564 ADAMTSL3P82987 1691 aa14.73□□□□□ -0.05
SGIP1-213ENST00000493564 PTPRMP28827 1452 aa14.72□□□□□ -0.05
SGIP1-213ENST00000493564 MBD5Q9P267 1494 aa14.72□□□□□ -0.05
SGIP1-213ENST00000493564 DIP2CQ9Y2E4 1556 aa14.72□□□□□ -0.05
SGIP1-213ENST00000493564 CAMSAP2Q08AD1 1489 aa14.71□□□□□ -0.05
SGIP1-213ENST00000493564 ABCA6Q8N139 1617 aa14.71□□□□□ -0.05
SGIP1-213ENST00000493564 MADDQ8WXG6 1647 aa14.71□□□□□ -0.05
SGIP1-213ENST00000493564 KIDINS220Q9ULH0 1771 aa14.71□□□□□ -0.05
SGIP1-213ENST00000493564 CEBPAP49715 358 aaPredicted RBP14.7□□□□□ -0.06
SGIP1-213ENST00000493564 TSPY4P0CV99 314 aa14.69□□□□□ -0.06
SGIP1-213ENST00000493564 TSPY10P0CW01 314 aa14.69□□□□□ -0.06
SGIP1-213ENST00000493564 RSPH4AQ5TD94 716 aa14.69□□□□□ -0.06
SGIP1-213ENST00000493564 MYOM3Q5VTT5 1437 aa14.68□□□□□ -0.06
SGIP1-213ENST00000493564 RIMS1Q86UR5 1692 aaKnown RBP14.68□□□□□ -0.06
SGIP1-213ENST00000493564 ATP7AQ04656 1500 aa14.66□□□□□ -0.06
SGIP1-213ENST00000493564 GGT6Q6P531 493 aa14.66□□□□□ -0.06
SGIP1-213ENST00000493564 ESF1Q9H501 851 aaKnown RBP14.66□□□□□ -0.06
SGIP1-213ENST00000493564 CCDC141Q6ZP82 1450 aa14.64□□□□□ -0.07
SGIP1-213ENST00000493564 MIA2Q96PC5 1412 aa14.64□□□□□ -0.07
SGIP1-213ENST00000493564 A2MP01023 1474 aa14.63□□□□□ -0.07
SGIP1-213ENST00000493564 INO80Q9ULG1 1556 aaPredicted RBP14.63□□□□□ -0.07
SGIP1-213ENST00000493564 RTEL1-TNFRSF6BF6WH68 1400 aa14.62□□□□□ -0.07
SGIP1-213ENST00000493564 FAM50AQ14320 339 aaKnown RBP14.62□□□□□ -0.07
SGIP1-213ENST00000493564 REREQ9P2R6 1566 aa14.62□□□□□ -0.07
SGIP1-213ENST00000493564 AGLP35573 1532 aa14.61□□□□□ -0.07
SGIP1-213ENST00000493564 FER1L4A9Z1Z3 1794 aa14.61□□□□□ -0.07
SGIP1-213ENST00000493564 KIF3BO15066 747 aa14.61□□□□□ -0.07
SGIP1-213ENST00000493564 CHIC2Q9UKJ5 165 aa14.61□□□□□ -0.07
SGIP1-213ENST00000493564 DHX29Q7Z478 1369 aaKnown RBP14.6□□□□□ -0.07
SGIP1-213ENST00000493564 FGD6Q6ZV73 1430 aa14.59□□□□□ -0.07
SGIP1-213ENST00000493564 PHF23Q9BUL5 403 aaPredicted RBP14.59□□□□□ -0.07
SGIP1-213ENST00000493564 SENP3Q9H4L4 574 aaPredicted RBP14.59□□□□□ -0.07
SGIP1-213ENST00000493564 ARHGEF5Q12774 1597 aa14.59□□□□□ -0.07
SGIP1-213ENST00000493564 PTPN23Q9H3S7 1636 aa14.59□□□□□ -0.07
SGIP1-213ENST00000493564 HSPA2P54652 639 aa14.58□□□□□ -0.08
SGIP1-213ENST00000493564 RRP7BPQ9NSQ0 103 aa14.58□□□□□ -0.08
SGIP1-213ENST00000493564 ABCC5O15440 1437 aa14.57□□□□□ -0.08
SGIP1-213ENST00000493564 PLXNC1O60486 1568 aa14.56□□□□□ -0.08
SGIP1-213ENST00000493564 ADGBQ8N7X0 1667 aa14.55□□□□□ -0.08
SGIP1-213ENST00000493564 ZMYM3Q14202 1370 aa14.55□□□□□ -0.08
SGIP1-213ENST00000493564 TCOF1Q13428 1488 aaKnown RBP14.53□□□□□ -0.08
SGIP1-213ENST00000493564 DAPK1P53355 1430 aa14.53□□□□□ -0.08
SGIP1-213ENST00000493564 WASHC2CQ9Y4E1 1318 aa14.52□□□□□ -0.08
SGIP1-213ENST00000493564 ITGAEP38570 1179 aa14.52□□□□□ -0.09
SGIP1-213ENST00000493564 LMTK3Q96Q04 1460 aa14.51□□□□□ -0.09
SGIP1-213ENST00000493564 CNTLNQ9NXG0 1405 aa14.51□□□□□ -0.09
SGIP1-213ENST00000493564 PPP6R1Q9UPN7 881 aa14.51□□□□□ -0.09
SGIP1-213ENST00000493564 MAST1Q9Y2H9 1570 aa14.5□□□□□ -0.09
SGIP1-213ENST00000493564 KIF15Q9NS87 1388 aa14.49□□□□□ -0.09
SGIP1-213ENST00000493564 C3P01024 1663 aa14.49□□□□□ -0.09
SGIP1-213ENST00000493564 CLTCQ00610 1675 aaKnown RBP14.49□□□□□ -0.09
SGIP1-213ENST00000493564 FBXO31Q5XUX0 539 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms