RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 FAM50AQ14320 339 aaKnown RBP8□□□□□ -1.13
NEK4-205ENST00000493199 PPARGC1BQ86YN6 1023 aaKnown RBP8□□□□□ -1.13
NEK4-205ENST00000493199 ZNF777Q9ULD5 760 aaPredicted RBP8□□□□□ -1.13
NEK4-205ENST00000493199 NCOA2Q15596 1464 aa8□□□□□ -1.13
NEK4-205ENST00000493199 TEX14Q8IWB6 1497 aa8□□□□□ -1.13
NEK4-205ENST00000493199 ITSN2Q9NZM3 1697 aa7.99□□□□□ -1.13
NEK4-205ENST00000493199 MYOM3Q5VTT5 1437 aa7.99□□□□□ -1.13
NEK4-205ENST00000493199 CD109Q6YHK3 1445 aa7.99□□□□□ -1.13
NEK4-205ENST00000493199 MYT1LQ9UL68 1186 aa7.99□□□□□ -1.13
NEK4-205ENST00000493199 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.98□□□□□ -1.13
NEK4-205ENST00000493199 PLCH2O75038 1416 aa7.97□□□□□ -1.13
NEK4-205ENST00000493199 ILDR1Q86SU0 546 aaPredicted RBP7.97□□□□□ -1.13
NEK4-205ENST00000493199 CFAP74Q9C0B2 1584 aa7.97□□□□□ -1.13
NEK4-205ENST00000493199 ADGRL1O94910 1474 aa7.96□□□□□ -1.13
NEK4-205ENST00000493199 ARHGAP5Q13017 1502 aa7.96□□□□□ -1.14
NEK4-205ENST00000493199 ARAP3Q8WWN8 1544 aa7.96□□□□□ -1.14
NEK4-205ENST00000493199 MAP3K4Q9Y6R4 1608 aa7.96□□□□□ -1.14
NEK4-205ENST00000493199 COL17A1Q9UMD9 1497 aaPredicted RBP7.95□□□□□ -1.14
NEK4-205ENST00000493199 LRRIQ1Q96JM4 1722 aa7.95□□□□□ -1.14
NEK4-205ENST00000493199 MYO5CQ9NQX4 1742 aa7.95□□□□□ -1.14
NEK4-205ENST00000493199 FGD6Q6ZV73 1430 aa7.95□□□□□ -1.14
NEK4-205ENST00000493199 ABCA9Q8IUA7 1624 aa7.94□□□□□ -1.14
NEK4-205ENST00000493199 FANCAO15360 1455 aa7.94□□□□□ -1.14
NEK4-205ENST00000493199 NEO1Q92859 1461 aa7.94□□□□□ -1.14
NEK4-205ENST00000493199 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.93□□□□□ -1.14
NEK4-205ENST00000493199 GPATCH8Q9UKJ3 1502 aaKnown RBP7.93□□□□□ -1.14
NEK4-205ENST00000493199 RRBP1Q9P2E9 1410 aaKnown RBP7.93□□□□□ -1.14
NEK4-205ENST00000493199 KIAA1107Q9UPP5 1409 aa7.93□□□□□ -1.14
NEK4-205ENST00000493199 MAGI3Q5TCQ9 1506 aa7.93□□□□□ -1.14
NEK4-205ENST00000493199 ITGAEP38570 1179 aa7.92□□□□□ -1.14
NEK4-205ENST00000493199 PCGF6Q9BYE7 350 aa7.91□□□□□ -1.14
NEK4-205ENST00000493199 AKNAQ7Z591 1439 aa7.91□□□□□ -1.14
NEK4-205ENST00000493199 PREX2Q70Z35 1606 aa7.9□□□□□ -1.14
NEK4-205ENST00000493199 PTPN23Q9H3S7 1636 aa7.9□□□□□ -1.14
NEK4-205ENST00000493199 HECW2Q9P2P5 1572 aa7.9□□□□□ -1.14
NEK4-205ENST00000493199 ANKRD30AQ9BXX3 1397 aa7.9□□□□□ -1.14
NEK4-205ENST00000493199 SPAG9O60271 1321 aaKnown RBP7.9□□□□□ -1.14
NEK4-205ENST00000493199 HNRNPMP52272 730 aaKnown RBP eCLIP7.9□□□□□ -1.14
NEK4-205ENST00000493199 PIAS4Q8N2W9 510 aaPredicted RBP7.9□□□□□ -1.14
NEK4-205ENST00000493199 DENND4BO75064 1496 aaPredicted RBP7.89□□□□□ -1.15
NEK4-205ENST00000493199 TCOF1Q13428 1488 aaKnown RBP7.89□□□□□ -1.15
NEK4-205ENST00000493199 SCAPERQ9BY12 1400 aa7.89□□□□□ -1.15
NEK4-205ENST00000493199 CAMSAP2Q08AD1 1489 aa7.88□□□□□ -1.15
NEK4-205ENST00000493199 ZNF518AQ6AHZ1 1483 aa7.88□□□□□ -1.15
NEK4-205ENST00000493199 CCDC141Q6ZP82 1450 aa7.88□□□□□ -1.15
NEK4-205ENST00000493199 HRCP23327 699 aa7.88□□□□□ -1.15
NEK4-205ENST00000493199 PLPPR3Q6T4P5 718 aa7.88□□□□□ -1.15
NEK4-205ENST00000493199 CDC42BPAQ5VT25 1732 aa7.88□□□□□ -1.15
NEK4-205ENST00000493199 TTC37Q6PGP7 1564 aa7.88□□□□□ -1.15
NEK4-205ENST00000493199 RTEL1-TNFRSF6BF6WH68 1400 aa7.86□□□□□ -1.15
NEK4-205ENST00000493199 ROCK1Q13464 1354 aa7.86□□□□□ -1.15
NEK4-205ENST00000493199 ARHGEF5Q12774 1597 aa7.86□□□□□ -1.15
NEK4-205ENST00000493199 ESF1Q9H501 851 aaKnown RBP7.86□□□□□ -1.15
NEK4-205ENST00000493199 MAGI2Q86UL8 1455 aa7.86□□□□□ -1.15
NEK4-205ENST00000493199 CDC42BPBQ9Y5S2 1711 aa7.86□□□□□ -1.15
NEK4-205ENST00000493199 DAPK1P53355 1430 aa7.86□□□□□ -1.15
NEK4-205ENST00000493199 CHIC2Q9UKJ5 165 aa7.85□□□□□ -1.15
NEK4-205ENST00000493199 SHANK2Q9UPX8 1470 aa7.85□□□□□ -1.15
NEK4-205ENST00000493199 ZNF644Q9H582 1327 aaPredicted RBP7.84□□□□□ -1.15
NEK4-205ENST00000493199 AFAP1Q8N556 730 aa7.84□□□□□ -1.15
NEK4-205ENST00000493199 KANK1Q14678 1352 aa7.84□□□□□ -1.16
NEK4-205ENST00000493199 DNMT1P26358 1616 aaKnown RBP7.83□□□□□ -1.16
NEK4-205ENST00000493199 TRIM52Q96A61 297 aa7.83□□□□□ -1.16
NEK4-205ENST00000493199 RRP7BPQ9NSQ0 103 aa7.83□□□□□ -1.16
NEK4-205ENST00000493199 C9orf84Q5VXU9 1444 aa7.83□□□□□ -1.16
NEK4-205ENST00000493199 SETD5Q9C0A6 1442 aa7.83□□□□□ -1.16
NEK4-205ENST00000493199 ABCC1P33527 1531 aa7.83□□□□□ -1.16
NEK4-205ENST00000493199 SYCP2Q9BX26 1530 aa7.83□□□□□ -1.16
NEK4-205ENST00000493199 ABCC5O15440 1437 aa7.82□□□□□ -1.16
NEK4-205ENST00000493199 SAMD9LQ8IVG5 1584 aa7.82□□□□□ -1.16
NEK4-205ENST00000493199 PPP6R1Q9UPN7 881 aa7.82□□□□□ -1.16
NEK4-205ENST00000493199 MBD5Q9P267 1494 aa7.81□□□□□ -1.16
NEK4-205ENST00000493199 MLH3Q9UHC1 1453 aa7.81□□□□□ -1.16
NEK4-205ENST00000493199 POGZQ7Z3K3 1410 aa7.81□□□□□ -1.16
NEK4-205ENST00000493199 RAPGEF3O95398 923 aa7.81□□□□□ -1.16
NEK4-205ENST00000493199 ARID4BQ4LE39 1312 aaPredicted RBP7.8□□□□□ -1.16
NEK4-205ENST00000493199 NCOA1Q15788 1441 aa7.8□□□□□ -1.16
NEK4-205ENST00000493199 FBXO41Q8TF61 875 aa7.8□□□□□ -1.16
NEK4-205ENST00000493199 KIF15Q9NS87 1388 aa7.8□□□□□ -1.16
NEK4-205ENST00000493199 ADGRL2O95490 1459 aa7.8□□□□□ -1.16
NEK4-205ENST00000493199 MAST1Q9Y2H9 1570 aa7.8□□□□□ -1.16
NEK4-205ENST00000493199 HFM1A2PYH4 1435 aa7.79□□□□□ -1.16
NEK4-205ENST00000493199 ANKRD50Q9ULJ7 1429 aa7.79□□□□□ -1.16
NEK4-205ENST00000493199 DUOX2Q9NRD8 1548 aa7.79□□□□□ -1.16
NEK4-205ENST00000493199 DHX29Q7Z478 1369 aaKnown RBP7.79□□□□□ -1.16
NEK4-205ENST00000493199 ADAMTSL3P82987 1691 aa7.79□□□□□ -1.16
NEK4-205ENST00000493199 ADGBQ8N7X0 1667 aa7.79□□□□□ -1.16
NEK4-205ENST00000493199 ERBINQ96RT1 1412 aa7.78□□□□□ -1.16
NEK4-205ENST00000493199 TRAPPC8Q9Y2L5 1435 aa7.78□□□□□ -1.16
NEK4-205ENST00000493199 ATP7AQ04656 1500 aa7.78□□□□□ -1.16
NEK4-205ENST00000493199 KIF3BO15066 747 aa7.78□□□□□ -1.16
NEK4-205ENST00000493199 CCER1Q8TC90 406 aaPredicted RBP7.78□□□□□ -1.16
NEK4-205ENST00000493199 PTPRMP28827 1452 aa7.78□□□□□ -1.16
NEK4-205ENST00000493199 CLSPNQ9HAW4 1339 aa7.78□□□□□ -1.16
NEK4-205ENST00000493199 ATP10AO60312 1499 aa7.77□□□□□ -1.17
NEK4-205ENST00000493199 ZEB1P37275 1124 aaPredicted RBP7.77□□□□□ -1.17
NEK4-205ENST00000493199 ZFYVE16Q7Z3T8 1539 aa7.77□□□□□ -1.17
NEK4-205ENST00000493199 PLXNC1O60486 1568 aa7.76□□□□□ -1.17
NEK4-205ENST00000493199 A2MP01023 1474 aa7.76□□□□□ -1.17
NEK4-205ENST00000493199 GGT6Q6P531 493 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms