RNA–Protein interactions for RNA: ENST00000492861.1

PKDCC-209, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 2

Gene PKDCC, Length 693 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-209ENST00000492861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.79■□□□□ 0.6
PKDCC-209ENST00000492861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
PKDCC-209ENST00000492861 CCNB3Q8WWL7 1395 aa18.78■□□□□ 0.6
PKDCC-209ENST00000492861 TTC37Q6PGP7 1564 aa18.77■□□□□ 0.6
PKDCC-209ENST00000492861 GPATCH8Q9UKJ3 1502 aaKnown RBP18.77■□□□□ 0.6
PKDCC-209ENST00000492861 CDC42BPAQ5VT25 1732 aa18.77■□□□□ 0.59
PKDCC-209ENST00000492861 ABCA9Q8IUA7 1624 aa18.76■□□□□ 0.59
PKDCC-209ENST00000492861 PREX2Q70Z35 1606 aa18.75■□□□□ 0.59
PKDCC-209ENST00000492861 TCOF1Q13428 1488 aaKnown RBP18.75■□□□□ 0.59
PKDCC-209ENST00000492861 ARAP3Q8WWN8 1544 aa18.74■□□□□ 0.59
PKDCC-209ENST00000492861 PTPN23Q9H3S7 1636 aa18.73■□□□□ 0.59
PKDCC-209ENST00000492861 MYO5CQ9NQX4 1742 aa18.72■□□□□ 0.59
PKDCC-209ENST00000492861 CDC42BPBQ9Y5S2 1711 aa18.69■□□□□ 0.58
PKDCC-209ENST00000492861 PLCH2O75038 1416 aa18.67■□□□□ 0.58
PKDCC-209ENST00000492861 CAMSAP2Q08AD1 1489 aa18.65■□□□□ 0.58
PKDCC-209ENST00000492861 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.57
PKDCC-209ENST00000492861 CFDP1Q9UEE9 299 aaPredicted RBP18.64■□□□□ 0.57
PKDCC-209ENST00000492861 ARHGAP5Q13017 1502 aa18.64■□□□□ 0.57
PKDCC-209ENST00000492861 SAMD9LQ8IVG5 1584 aa18.61■□□□□ 0.57
PKDCC-209ENST00000492861 PLEKHH2Q8IVE3 1493 aa18.61■□□□□ 0.57
PKDCC-209ENST00000492861 DNMT1P26358 1616 aaKnown RBP18.6■□□□□ 0.57
PKDCC-209ENST00000492861 HECW2Q9P2P5 1572 aa18.6■□□□□ 0.57
PKDCC-209ENST00000492861 CFAP74Q9C0B2 1584 aa18.59■□□□□ 0.57
PKDCC-209ENST00000492861 KIAA1107Q9UPP5 1409 aa18.59■□□□□ 0.57
PKDCC-209ENST00000492861 FAM50AQ14320 339 aaKnown RBP18.59■□□□□ 0.57
PKDCC-209ENST00000492861 ARHGEF5Q12774 1597 aa18.59■□□□□ 0.57
PKDCC-209ENST00000492861 ABCC1P33527 1531 aa18.57■□□□□ 0.56
PKDCC-209ENST00000492861 FANCAO15360 1455 aa18.57■□□□□ 0.56
PKDCC-209ENST00000492861 EFCAB2Q5VUJ9 269 aa18.56■□□□□ 0.56
PKDCC-209ENST00000492861 CROCC2H7BZ55 1655 aa18.55■□□□□ 0.56
PKDCC-209ENST00000492861 SHANK2Q9UPX8 1470 aa18.55■□□□□ 0.56
PKDCC-209ENST00000492861 ILDR1Q86SU0 546 aaPredicted RBP18.55■□□□□ 0.56
PKDCC-209ENST00000492861 DAPK1P53355 1430 aa18.55■□□□□ 0.56
PKDCC-209ENST00000492861 ZNF644Q9H582 1327 aaPredicted RBP18.54■□□□□ 0.56
PKDCC-209ENST00000492861 NEO1Q92859 1461 aa18.54■□□□□ 0.56
PKDCC-209ENST00000492861 MBD5Q9P267 1494 aa18.54■□□□□ 0.56
PKDCC-209ENST00000492861 ABCC5O15440 1437 aa18.53■□□□□ 0.56
PKDCC-209ENST00000492861 RAPGEF3O95398 923 aa18.53■□□□□ 0.56
PKDCC-209ENST00000492861 AKNAQ7Z591 1439 aa18.53■□□□□ 0.56
PKDCC-209ENST00000492861 SYCP2Q9BX26 1530 aa18.53■□□□□ 0.56
PKDCC-209ENST00000492861 PTPRKQ15262 1439 aa18.51■□□□□ 0.55
PKDCC-209ENST00000492861 CCDC141Q6ZP82 1450 aa18.51■□□□□ 0.55
PKDCC-209ENST00000492861 RSPH4AQ5TD94 716 aa18.5■□□□□ 0.55
PKDCC-209ENST00000492861 ZNF777Q9ULD5 760 aaPredicted RBP18.49■□□□□ 0.55
PKDCC-209ENST00000492861 ROCK1Q13464 1354 aa18.49■□□□□ 0.55
PKDCC-209ENST00000492861 ARHGEF12Q9NZN5 1544 aa18.49■□□□□ 0.55
PKDCC-209ENST00000492861 MAST1Q9Y2H9 1570 aa18.48■□□□□ 0.55
PKDCC-209ENST00000492861 ADGRL2O95490 1459 aa18.48■□□□□ 0.55
PKDCC-209ENST00000492861 ADGBQ8N7X0 1667 aa18.47■□□□□ 0.55
PKDCC-209ENST00000492861 HFM1A2PYH4 1435 aa18.46■□□□□ 0.55
PKDCC-209ENST00000492861 FRMPD1Q5SYB0 1578 aa18.44■□□□□ 0.54
PKDCC-209ENST00000492861 C9orf84Q5VXU9 1444 aa18.44■□□□□ 0.54
PKDCC-209ENST00000492861 ARID4BQ4LE39 1312 aaPredicted RBP18.44■□□□□ 0.54
PKDCC-209ENST00000492861 ADAMTSL3P82987 1691 aa18.44■□□□□ 0.54
PKDCC-209ENST00000492861 GCC2Q8IWJ2 1684 aa18.44■□□□□ 0.54
PKDCC-209ENST00000492861 ITGAEP38570 1179 aa18.43■□□□□ 0.54
PKDCC-209ENST00000492861 PTPRMP28827 1452 aa18.43■□□□□ 0.54
PKDCC-209ENST00000492861 SCAPERQ9BY12 1400 aa18.41■□□□□ 0.54
PKDCC-209ENST00000492861 TRAPPC8Q9Y2L5 1435 aa18.41■□□□□ 0.54
PKDCC-209ENST00000492861 DENND4BO75064 1496 aaPredicted RBP18.41■□□□□ 0.54
PKDCC-209ENST00000492861 HNRNPMP52272 730 aaKnown RBP eCLIP18.41■□□□□ 0.54
PKDCC-209ENST00000492861 PLXNC1O60486 1568 aa18.41■□□□□ 0.54
PKDCC-209ENST00000492861 KDM5CP41229 1560 aa18.41■□□□□ 0.54
PKDCC-209ENST00000492861 NAIPQ13075 1403 aa18.4■□□□□ 0.54
PKDCC-209ENST00000492861 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
PKDCC-209ENST00000492861 ZNF518AQ6AHZ1 1483 aa18.4■□□□□ 0.54
PKDCC-209ENST00000492861 NCOA1Q15788 1441 aa18.4■□□□□ 0.54
PKDCC-209ENST00000492861 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
PKDCC-209ENST00000492861 BCORL1Q5H9F3 1711 aa18.39■□□□□ 0.53
PKDCC-209ENST00000492861 ANKRD30AQ9BXX3 1397 aa18.39■□□□□ 0.53
PKDCC-209ENST00000492861 RTEL1-TNFRSF6BF6WH68 1400 aa18.39■□□□□ 0.53
PKDCC-209ENST00000492861 INO80Q9ULG1 1556 aaPredicted RBP18.38■□□□□ 0.53
PKDCC-209ENST00000492861 ZFYVE16Q7Z3T8 1539 aa18.38■□□□□ 0.53
PKDCC-209ENST00000492861 ARHGEF40Q8TER5 1519 aa18.38■□□□□ 0.53
PKDCC-209ENST00000492861 TSPY4P0CV99 314 aa18.37■□□□□ 0.53
PKDCC-209ENST00000492861 TSPY10P0CW01 314 aa18.37■□□□□ 0.53
PKDCC-209ENST00000492861 HRCP23327 699 aa18.36■□□□□ 0.53
PKDCC-209ENST00000492861 RICTORQ6R327 1708 aa18.36■□□□□ 0.53
PKDCC-209ENST00000492861 MADDQ8WXG6 1647 aa18.35■□□□□ 0.53
PKDCC-209ENST00000492861 ATP7AQ04656 1500 aa18.33■□□□□ 0.53
PKDCC-209ENST00000492861 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.53
PKDCC-209ENST00000492861 RAB3GAP2Q9H2M9 1393 aa18.33■□□□□ 0.53
PKDCC-209ENST00000492861 CHIC2Q9UKJ5 165 aa18.33■□□□□ 0.52
PKDCC-209ENST00000492861 MLH3Q9UHC1 1453 aa18.33■□□□□ 0.52
PKDCC-209ENST00000492861 KIF15Q9NS87 1388 aa18.31■□□□□ 0.52
PKDCC-209ENST00000492861 SPAG9O60271 1321 aaKnown RBP18.31■□□□□ 0.52
PKDCC-209ENST00000492861 KIDINS220Q9ULH0 1771 aa18.3■□□□□ 0.52
PKDCC-209ENST00000492861 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
PKDCC-209ENST00000492861 AFAP1Q8N556 730 aa18.3■□□□□ 0.52
PKDCC-209ENST00000492861 DUOX2Q9NRD8 1548 aa18.29■□□□□ 0.52
PKDCC-209ENST00000492861 RRP7BPQ9NSQ0 103 aa18.29■□□□□ 0.52
PKDCC-209ENST00000492861 RIMS1Q86UR5 1692 aaKnown RBP18.28■□□□□ 0.52
PKDCC-209ENST00000492861 MAGI2Q86UL8 1455 aa18.28■□□□□ 0.52
PKDCC-209ENST00000492861 YEATS2Q9ULM3 1422 aa18.28■□□□□ 0.52
PKDCC-209ENST00000492861 ANKRD50Q9ULJ7 1429 aa18.27■□□□□ 0.52
PKDCC-209ENST00000492861 ERBINQ96RT1 1412 aa18.26■□□□□ 0.51
PKDCC-209ENST00000492861 LMTK3Q96Q04 1460 aa18.25■□□□□ 0.51
PKDCC-209ENST00000492861 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
PKDCC-209ENST00000492861 MLECQ14165 292 aa18.22■□□□□ 0.51
PKDCC-209ENST00000492861 FBXO41Q8TF61 875 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms