RNA–Protein interactions for RNA: ENST00000492819.1

CCDC12-206, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-206ENST00000492819 UBTFP17480 764 aaKnown RBP28.06■■■□□ 2.08
CCDC12-206ENST00000492819 HSPA2P54652 639 aa28.06■■■□□ 2.08
CCDC12-206ENST00000492819 ATP1B4Q9UN42 357 aaPredicted RBP28.06■■■□□ 2.08
CCDC12-206ENST00000492819 MAGI2Q86UL8 1455 aa28.06■■■□□ 2.08
CCDC12-206ENST00000492819 MLECQ14165 292 aa28.05■■■□□ 2.08
CCDC12-206ENST00000492819 KIF14Q15058 1648 aa28.03■■■□□ 2.08
CCDC12-206ENST00000492819 FMN1Q68DA7 1419 aa28.02■■■□□ 2.08
CCDC12-206ENST00000492819 MYO5CQ9NQX4 1742 aa28■■■□□ 2.07
CCDC12-206ENST00000492819 FER1L4A9Z1Z3 1794 aa27.99■■■□□ 2.07
CCDC12-206ENST00000492819 LRRIQ1Q96JM4 1722 aa27.97■■■□□ 2.07
CCDC12-206ENST00000492819 EFCAB2Q5VUJ9 269 aa27.96■■■□□ 2.07
CCDC12-206ENST00000492819 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
CCDC12-206ENST00000492819 ATP10AO60312 1499 aa27.95■■■□□ 2.07
CCDC12-206ENST00000492819 ARHGEF12Q9NZN5 1544 aa27.94■■■□□ 2.06
CCDC12-206ENST00000492819 TROQ12816 1431 aaPredicted RBP27.93■■■□□ 2.06
CCDC12-206ENST00000492819 C9orf84Q5VXU9 1444 aa27.92■■■□□ 2.06
CCDC12-206ENST00000492819 CDK11AQ9UQ88 783 aaPredicted RBP27.9■■■□□ 2.06
CCDC12-206ENST00000492819 AFAP1Q8N556 730 aa27.89■■■□□ 2.06
CCDC12-206ENST00000492819 ARHGAP5Q13017 1502 aa27.88■■■□□ 2.05
CCDC12-206ENST00000492819 KDM5CP41229 1560 aa27.87■■■□□ 2.05
CCDC12-206ENST00000492819 CEBPAP49715 358 aaPredicted RBP27.87■■■□□ 2.05
CCDC12-206ENST00000492819 ZNF518AQ6AHZ1 1483 aa27.87■■■□□ 2.05
CCDC12-206ENST00000492819 CDC42BPBQ9Y5S2 1711 aa27.84■■■□□ 2.05
CCDC12-206ENST00000492819 CLIP1P30622 1438 aa27.82■■■□□ 2.04
CCDC12-206ENST00000492819 DIP2CQ9Y2E4 1556 aa27.82■■■□□ 2.04
CCDC12-206ENST00000492819 PREX1Q8TCU6 1659 aa27.78■■■□□ 2.04
CCDC12-206ENST00000492819 ABCA6Q8N139 1617 aa27.78■■■□□ 2.04
CCDC12-206ENST00000492819 TRAPPC8Q9Y2L5 1435 aa27.77■■■□□ 2.04
CCDC12-206ENST00000492819 PREX2Q70Z35 1606 aa27.75■■■□□ 2.03
CCDC12-206ENST00000492819 CASKIN1Q8WXD9 1431 aa27.75■■■□□ 2.03
CCDC12-206ENST00000492819 ABCC1P33527 1531 aa27.74■■■□□ 2.03
CCDC12-206ENST00000492819 CERKQ8TCT0 537 aa27.74■■■□□ 2.03
CCDC12-206ENST00000492819 MLH3Q9UHC1 1453 aa27.73■■■□□ 2.03
CCDC12-206ENST00000492819 MYT1LQ9UL68 1186 aa27.73■■■□□ 2.03
CCDC12-206ENST00000492819 REREQ9P2R6 1566 aa27.73■■■□□ 2.03
CCDC12-206ENST00000492819 ITSN2Q9NZM3 1697 aa27.7■■■□□ 2.02
CCDC12-206ENST00000492819 STRCQ7RTU9 1775 aa27.7■■■□□ 2.02
CCDC12-206ENST00000492819 CCDC18Q5T9S5 1454 aa27.69■■■□□ 2.02
CCDC12-206ENST00000492819 CDC42BPAQ5VT25 1732 aa27.67■■■□□ 2.02
CCDC12-206ENST00000492819 SETD1BQ9UPS6 1966 aaKnown RBP27.67■■■□□ 2.02
CCDC12-206ENST00000492819 KIDINS220Q9ULH0 1771 aa27.66■■■□□ 2.02
CCDC12-206ENST00000492819 C3P01024 1663 aa27.65■■■□□ 2.02
CCDC12-206ENST00000492819 AGLP35573 1532 aa27.65■■■□□ 2.02
CCDC12-206ENST00000492819 UHRF1BP1Q6BDS2 1440 aa27.65■■■□□ 2.02
CCDC12-206ENST00000492819 FYCO1Q9BQS8 1478 aa27.6■■■□□ 2.01
CCDC12-206ENST00000492819 SAMD9LQ8IVG5 1584 aa27.58■■■□□ 2.01
CCDC12-206ENST00000492819 GPATCH8Q9UKJ3 1502 aaKnown RBP27.56■■■□□ 2
CCDC12-206ENST00000492819 ZNF777Q9ULD5 760 aaPredicted RBP27.55■■■□□ 2
CCDC12-206ENST00000492819 SYCP2Q9BX26 1530 aa27.55■■■□□ 2
CCDC12-206ENST00000492819 HNRNPMP52272 730 aaKnown RBP eCLIP27.51■■□□□ 1.99
CCDC12-206ENST00000492819 DMRT2Q9Y5R5 561 aa27.51■■□□□ 1.99
CCDC12-206ENST00000492819 ESF1Q9H501 851 aaKnown RBP27.49■■□□□ 1.99
CCDC12-206ENST00000492819 PTPRTO14522 1441 aa27.48■■□□□ 1.99
CCDC12-206ENST00000492819 CNTLNQ9NXG0 1405 aa27.47■■□□□ 1.99
CCDC12-206ENST00000492819 SPAG9O60271 1321 aaKnown RBP27.46■■□□□ 1.99
CCDC12-206ENST00000492819 SUPT6HQ7KZ85 1726 aaKnown RBP27.45■■□□□ 1.99
CCDC12-206ENST00000492819 NCOA1Q15788 1441 aa27.43■■□□□ 1.98
CCDC12-206ENST00000492819 ATP7AQ04656 1500 aa27.43■■□□□ 1.98
CCDC12-206ENST00000492819 INO80Q9ULG1 1556 aaPredicted RBP27.42■■□□□ 1.98
CCDC12-206ENST00000492819 MROH2AA6NES4 1674 aa27.42■■□□□ 1.98
CCDC12-206ENST00000492819 LTBP4Q8N2S1 1624 aa27.41■■□□□ 1.98
CCDC12-206ENST00000492819 PLXNC1O60486 1568 aa27.41■■□□□ 1.98
CCDC12-206ENST00000492819 ZMYM3Q14202 1370 aa27.41■■□□□ 1.98
CCDC12-206ENST00000492819 KIAA1107Q9UPP5 1409 aa27.41■■□□□ 1.98
CCDC12-206ENST00000492819 CFDP1Q9UEE9 299 aaPredicted RBP27.4■■□□□ 1.98
CCDC12-206ENST00000492819 NPATQ14207 1427 aa27.39■■□□□ 1.97
CCDC12-206ENST00000492819 CCNB3Q8WWL7 1395 aa27.38■■□□□ 1.97
CCDC12-206ENST00000492819 CAMSAP1Q5T5Y3 1602 aa27.37■■□□□ 1.97
CCDC12-206ENST00000492819 A2MP01023 1474 aa27.37■■□□□ 1.97
CCDC12-206ENST00000492819 CLTCQ00610 1675 aaKnown RBP27.36■■□□□ 1.97
CCDC12-206ENST00000492819 ZNF644Q9H582 1327 aaPredicted RBP27.36■■□□□ 1.97
CCDC12-206ENST00000492819 PLEKHH2Q8IVE3 1493 aa27.35■■□□□ 1.97
CCDC12-206ENST00000492819 MTUS2Q5JR59 1369 aa27.35■■□□□ 1.97
CCDC12-206ENST00000492819 TIAM1Q13009 1591 aa27.33■■□□□ 1.97
CCDC12-206ENST00000492819 NCKAP5LQ9HCH0 1330 aa27.31■■□□□ 1.96
CCDC12-206ENST00000492819 GGT6Q6P531 493 aa27.3■■□□□ 1.96
CCDC12-206ENST00000492819 PTPRKQ15262 1439 aa27.3■■□□□ 1.96
CCDC12-206ENST00000492819 ILDR2Q71H61 639 aa27.29■■□□□ 1.96
CCDC12-206ENST00000492819 MBD5Q9P267 1494 aa27.29■■□□□ 1.96
CCDC12-206ENST00000492819 MYO3AQ8NEV4 1616 aa27.28■■□□□ 1.96
CCDC12-206ENST00000492819 DISP3Q9P2K9 1392 aa27.27■■□□□ 1.96
CCDC12-206ENST00000492819 ZNF142P52746 1687 aaPredicted RBP27.27■■□□□ 1.96
CCDC12-206ENST00000492819 ADGBQ8N7X0 1667 aa27.24■■□□□ 1.95
CCDC12-206ENST00000492819 CEP170BQ9Y4F5 1589 aaPredicted RBP27.24■■□□□ 1.95
CCDC12-206ENST00000492819 EHBP1L1Q8N3D4 1523 aa27.24■■□□□ 1.95
CCDC12-206ENST00000492819 ZNF335Q9H4Z2 1342 aaPredicted RBP27.23■■□□□ 1.95
CCDC12-206ENST00000492819 IQSEC2Q5JU85 1478 aa27.21■■□□□ 1.95
CCDC12-206ENST00000492819 CEP162Q5TB80 1403 aa27.21■■□□□ 1.95
CCDC12-206ENST00000492819 TCOF1Q13428 1488 aaKnown RBP27.2■■□□□ 1.95
CCDC12-206ENST00000492819 PLA2R1Q13018 1463 aa27.19■■□□□ 1.94
CCDC12-206ENST00000492819 RTEL1-TNFRSF6BF6WH68 1400 aa27.16■■□□□ 1.94
CCDC12-206ENST00000492819 DHX29Q7Z478 1369 aaKnown RBP27.16■■□□□ 1.94
CCDC12-206ENST00000492819 PPP6R1Q9UPN7 881 aa27.15■■□□□ 1.94
CCDC12-206ENST00000492819 PKD2Q13563 968 aa27.14■■□□□ 1.94
CCDC12-206ENST00000492819 SPATA31D1Q6ZQQ2 1576 aa27.13■■□□□ 1.93
CCDC12-206ENST00000492819 NCOA2Q15596 1464 aa27.12■■□□□ 1.93
CCDC12-206ENST00000492819 DNMT1P26358 1616 aaKnown RBP27.12■■□□□ 1.93
CCDC12-206ENST00000492819 FBXO31Q5XUX0 539 aaPredicted RBP27.11■■□□□ 1.93
CCDC12-206ENST00000492819 A2ML1A8K2U0 1454 aa27.11■■□□□ 1.93
CCDC12-206ENST00000492819 CAMSAP2Q08AD1 1489 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms