RNA–Protein interactions for RNA: ENST00000492779.5

RBM39-237, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-237ENST00000492779 FAM69CQ0P6D2 419 aa9.69□□□□□ -0.86
RBM39-237ENST00000492779 CDK11AQ9UQ88 783 aaPredicted RBP9.69□□□□□ -0.86
RBM39-237ENST00000492779 CCDC18Q5T9S5 1454 aa9.68□□□□□ -0.86
RBM39-237ENST00000492779 TROQ12816 1431 aaPredicted RBP9.67□□□□□ -0.86
RBM39-237ENST00000492779 NCOA2Q15596 1464 aa9.67□□□□□ -0.86
RBM39-237ENST00000492779 CFAP43Q8NDM7 1665 aa9.66□□□□□ -0.86
RBM39-237ENST00000492779 WDR7Q9Y4E6 1490 aa9.66□□□□□ -0.86
RBM39-237ENST00000492779 FAM50AQ14320 339 aaKnown RBP9.65□□□□□ -0.86
RBM39-237ENST00000492779 TTC37Q6PGP7 1564 aa9.64□□□□□ -0.87
RBM39-237ENST00000492779 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.63□□□□□ -0.87
RBM39-237ENST00000492779 CFDP1Q9UEE9 299 aaPredicted RBP9.63□□□□□ -0.87
RBM39-237ENST00000492779 MAP3K1Q13233 1512 aa9.63□□□□□ -0.87
RBM39-237ENST00000492779 CCNB3Q8WWL7 1395 aa9.62□□□□□ -0.87
RBM39-237ENST00000492779 EHBP1L1Q8N3D4 1523 aa9.62□□□□□ -0.87
RBM39-237ENST00000492779 HNRNPMP52272 730 aaKnown RBP eCLIP9.62□□□□□ -0.87
RBM39-237ENST00000492779 ABCC10Q5T3U5 1492 aa9.62□□□□□ -0.87
RBM39-237ENST00000492779 GPATCH8Q9UKJ3 1502 aaKnown RBP9.61□□□□□ -0.87
RBM39-237ENST00000492779 CHIC2Q9UKJ5 165 aa9.6□□□□□ -0.87
RBM39-237ENST00000492779 MAPKBP1O60336 1514 aa9.6□□□□□ -0.87
RBM39-237ENST00000492779 CD109Q6YHK3 1445 aa9.59□□□□□ -0.87
RBM39-237ENST00000492779 TSPOAP1O95153 1857 aa9.59□□□□□ -0.87
RBM39-237ENST00000492779 SUPT6HQ7KZ85 1726 aaKnown RBP9.59□□□□□ -0.87
RBM39-237ENST00000492779 AFAP1Q8N556 730 aa9.59□□□□□ -0.87
RBM39-237ENST00000492779 SUPT16HQ9Y5B9 1047 aaKnown RBP9.59□□□□□ -0.87
RBM39-237ENST00000492779 MYOM3Q5VTT5 1437 aa9.58□□□□□ -0.88
RBM39-237ENST00000492779 RAPGEF3O95398 923 aa9.58□□□□□ -0.88
RBM39-237ENST00000492779 DIP2BQ9P265 1576 aa9.58□□□□□ -0.88
RBM39-237ENST00000492779 FGD6Q6ZV73 1430 aa9.57□□□□□ -0.88
RBM39-237ENST00000492779 ARHGAP5Q13017 1502 aa9.56□□□□□ -0.88
RBM39-237ENST00000492779 HIRIP3Q9BW71 556 aaPredicted RBP9.56□□□□□ -0.88
RBM39-237ENST00000492779 PLCH2O75038 1416 aa9.56□□□□□ -0.88
RBM39-237ENST00000492779 PTPRKQ15262 1439 aa9.56□□□□□ -0.88
RBM39-237ENST00000492779 RRBP1Q9P2E9 1410 aaKnown RBP9.56□□□□□ -0.88
RBM39-237ENST00000492779 CDC42BPAQ5VT25 1732 aa9.56□□□□□ -0.88
RBM39-237ENST00000492779 KIF13AQ9H1H9 1805 aa9.56□□□□□ -0.88
RBM39-237ENST00000492779 CDC42BPBQ9Y5S2 1711 aa9.55□□□□□ -0.88
RBM39-237ENST00000492779 SIN3AQ96ST3 1273 aa9.55□□□□□ -0.88
RBM39-237ENST00000492779 ARHGEF12Q9NZN5 1544 aa9.55□□□□□ -0.88
RBM39-237ENST00000492779 EFCAB2Q5VUJ9 269 aa9.54□□□□□ -0.88
RBM39-237ENST00000492779 FANCAO15360 1455 aa9.54□□□□□ -0.88
RBM39-237ENST00000492779 COL17A1Q9UMD9 1497 aaPredicted RBP9.54□□□□□ -0.88
RBM39-237ENST00000492779 ABCA9Q8IUA7 1624 aa9.53□□□□□ -0.88
RBM39-237ENST00000492779 RRP7BPQ9NSQ0 103 aa9.53□□□□□ -0.88
RBM39-237ENST00000492779 TRAPPC8Q9Y2L5 1435 aa9.52□□□□□ -0.88
RBM39-237ENST00000492779 CAMSAP2Q08AD1 1489 aa9.52□□□□□ -0.88
RBM39-237ENST00000492779 RAB3GAP2Q9H2M9 1393 aa9.52□□□□□ -0.89
RBM39-237ENST00000492779 SAMD9LQ8IVG5 1584 aa9.52□□□□□ -0.89
RBM39-237ENST00000492779 SCAPERQ9BY12 1400 aa9.51□□□□□ -0.89
RBM39-237ENST00000492779 PTPN23Q9H3S7 1636 aa9.51□□□□□ -0.89
RBM39-237ENST00000492779 AKNAQ7Z591 1439 aa9.51□□□□□ -0.89
RBM39-237ENST00000492779 SYCP2Q9BX26 1530 aa9.51□□□□□ -0.89
RBM39-237ENST00000492779 MYT1LQ9UL68 1186 aa9.51□□□□□ -0.89
RBM39-237ENST00000492779 MYO5CQ9NQX4 1742 aa9.5□□□□□ -0.89
RBM39-237ENST00000492779 PREX2Q70Z35 1606 aa9.5□□□□□ -0.89
RBM39-237ENST00000492779 MAP3K4Q9Y6R4 1608 aa9.5□□□□□ -0.89
RBM39-237ENST00000492779 TSHZ2Q9NRE2 1034 aa9.5□□□□□ -0.89
RBM39-237ENST00000492779 PPRC1Q5VV67 1664 aaKnown RBP9.5□□□□□ -0.89
RBM39-237ENST00000492779 ADGRL1O94910 1474 aa9.49□□□□□ -0.89
RBM39-237ENST00000492779 MBD5Q9P267 1494 aa9.49□□□□□ -0.89
RBM39-237ENST00000492779 ABCC5O15440 1437 aa9.49□□□□□ -0.89
RBM39-237ENST00000492779 ARXQ96QS3 562 aa9.49□□□□□ -0.89
RBM39-237ENST00000492779 BCL11AQ9H165 835 aa9.49□□□□□ -0.89
RBM39-237ENST00000492779 MIA2Q96PC5 1412 aa9.48□□□□□ -0.89
RBM39-237ENST00000492779 BCANQ96GW7 911 aa9.48□□□□□ -0.89
RBM39-237ENST00000492779 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
RBM39-237ENST00000492779 GLI2P10070 1586 aa9.48□□□□□ -0.89
RBM39-237ENST00000492779 TAOK2Q9UL54 1235 aa9.48□□□□□ -0.89
RBM39-237ENST00000492779 ADRA2BP18089 450 aa9.47□□□□□ -0.89
RBM39-237ENST00000492779 DDX10Q13206 875 aaKnown RBP9.47□□□□□ -0.89
RBM39-237ENST00000492779 DAPK1P53355 1430 aa9.46□□□□□ -0.89
RBM39-237ENST00000492779 CLSPNQ9HAW4 1339 aa9.46□□□□□ -0.89
RBM39-237ENST00000492779 TCOF1Q13428 1488 aaKnown RBP9.46□□□□□ -0.9
RBM39-237ENST00000492779 ITSN2Q9NZM3 1697 aa9.45□□□□□ -0.9
RBM39-237ENST00000492779 TSPY4P0CV99 314 aa9.45□□□□□ -0.9
RBM39-237ENST00000492779 TSPY10P0CW01 314 aa9.45□□□□□ -0.9
RBM39-237ENST00000492779 ABCC1P33527 1531 aa9.44□□□□□ -0.9
RBM39-237ENST00000492779 SPAG9O60271 1321 aaKnown RBP9.44□□□□□ -0.9
RBM39-237ENST00000492779 YEATS2Q9ULM3 1422 aa9.44□□□□□ -0.9
RBM39-237ENST00000492779 C9orf84Q5VXU9 1444 aa9.43□□□□□ -0.9
RBM39-237ENST00000492779 DENND4BO75064 1496 aaPredicted RBP9.42□□□□□ -0.9
RBM39-237ENST00000492779 PPP1R15AO75807 674 aaPredicted RBP9.42□□□□□ -0.9
RBM39-237ENST00000492779 POGZQ7Z3K3 1410 aa9.42□□□□□ -0.9
RBM39-237ENST00000492779 KIAA1107Q9UPP5 1409 aa9.42□□□□□ -0.9
RBM39-237ENST00000492779 KDM6BO15054 1643 aa9.41□□□□□ -0.9
RBM39-237ENST00000492779 CCDC141Q6ZP82 1450 aa9.41□□□□□ -0.9
RBM39-237ENST00000492779 NEO1Q92859 1461 aa9.41□□□□□ -0.9
RBM39-237ENST00000492779 NCOA1Q15788 1441 aa9.41□□□□□ -0.9
RBM39-237ENST00000492779 DNMT1P26358 1616 aaKnown RBP9.41□□□□□ -0.9
RBM39-237ENST00000492779 MLECQ14165 292 aa9.4□□□□□ -0.9
RBM39-237ENST00000492779 ARAP3Q8WWN8 1544 aa9.4□□□□□ -0.9
RBM39-237ENST00000492779 TEX14Q8IWB6 1497 aa9.4□□□□□ -0.9
RBM39-237ENST00000492779 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.4□□□□□ -0.94e-13■■□□□ 11.6
RBM39-237ENST00000492779 FRMPD1Q5SYB0 1578 aa9.4□□□□□ -0.9
RBM39-237ENST00000492779 TRIM52Q96A61 297 aa9.39□□□□□ -0.91
RBM39-237ENST00000492779 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.39□□□□□ -0.91
RBM39-237ENST00000492779 NAIPQ13075 1403 aa9.39□□□□□ -0.91
RBM39-237ENST00000492779 FOXD1Q16676 465 aa9.39□□□□□ -0.91
RBM39-237ENST00000492779 ERICH6Q7L0X2 663 aa9.39□□□□□ -0.91
RBM39-237ENST00000492779 KIF15Q9NS87 1388 aa9.39□□□□□ -0.91
RBM39-237ENST00000492779 SETD5Q9C0A6 1442 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms