RNA–Protein interactions for RNA: ENST00000492418.1

TMC1-205, Transcript of transmembrane channel like 1, humanhuman

TSL 3

Gene TMC1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-205ENST00000492418 CFDP1Q9UEE9 299 aaPredicted RBP17.45■□□□□ 0.38
TMC1-205ENST00000492418 DENND4BO75064 1496 aaPredicted RBP17.44■□□□□ 0.38
TMC1-205ENST00000492418 MAP3K1Q13233 1512 aa17.44■□□□□ 0.38
TMC1-205ENST00000492418 ADGRL1O94910 1474 aa17.44■□□□□ 0.38
TMC1-205ENST00000492418 SCAPERQ9BY12 1400 aa17.42■□□□□ 0.38
TMC1-205ENST00000492418 MYT1LQ9UL68 1186 aa17.42■□□□□ 0.38
TMC1-205ENST00000492418 LRRC9Q6ZRR7 1453 aa17.42■□□□□ 0.38
TMC1-205ENST00000492418 KANK4Q5T7N3 995 aaPredicted RBP17.4■□□□□ 0.38
TMC1-205ENST00000492418 SUPT6HQ7KZ85 1726 aaKnown RBP17.4■□□□□ 0.38
TMC1-205ENST00000492418 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
TMC1-205ENST00000492418 PREX2Q70Z35 1606 aa17.39■□□□□ 0.38
TMC1-205ENST00000492418 CDC42BPBQ9Y5S2 1711 aa17.38■□□□□ 0.37
TMC1-205ENST00000492418 NCOA2Q15596 1464 aa17.37■□□□□ 0.37
TMC1-205ENST00000492418 CDC42BPAQ5VT25 1732 aa17.37■□□□□ 0.37
TMC1-205ENST00000492418 PLEKHH2Q8IVE3 1493 aa17.34■□□□□ 0.37
TMC1-205ENST00000492418 ITSN2Q9NZM3 1697 aa17.34■□□□□ 0.37
TMC1-205ENST00000492418 ZNF518AQ6AHZ1 1483 aa17.33■□□□□ 0.37
TMC1-205ENST00000492418 POGZQ7Z3K3 1410 aa17.33■□□□□ 0.36
TMC1-205ENST00000492418 AFAP1Q8N556 730 aa17.33■□□□□ 0.36
TMC1-205ENST00000492418 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.36
TMC1-205ENST00000492418 ARID4BQ4LE39 1312 aaPredicted RBP17.31■□□□□ 0.36
TMC1-205ENST00000492418 RICTORQ6R327 1708 aa17.31■□□□□ 0.36
TMC1-205ENST00000492418 MAGI2Q86UL8 1455 aa17.31■□□□□ 0.36
TMC1-205ENST00000492418 AEBP2Q6ZN18 517 aaPredicted RBP17.3■□□□□ 0.36
TMC1-205ENST00000492418 ABCC1P33527 1531 aa17.29■□□□□ 0.36
TMC1-205ENST00000492418 KIAA1107Q9UPP5 1409 aa17.29■□□□□ 0.36
TMC1-205ENST00000492418 FRMPD1Q5SYB0 1578 aa17.28■□□□□ 0.36
TMC1-205ENST00000492418 ZNF644Q9H582 1327 aaPredicted RBP17.27■□□□□ 0.36
TMC1-205ENST00000492418 RSPH4AQ5TD94 716 aa17.27■□□□□ 0.36
TMC1-205ENST00000492418 SAMD9LQ8IVG5 1584 aa17.27■□□□□ 0.35
TMC1-205ENST00000492418 ZMYM4Q5VZL5 1548 aa17.26■□□□□ 0.35
TMC1-205ENST00000492418 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
TMC1-205ENST00000492418 SPAG9O60271 1321 aaKnown RBP17.26■□□□□ 0.35
TMC1-205ENST00000492418 TRAPPC8Q9Y2L5 1435 aa17.26■□□□□ 0.35
TMC1-205ENST00000492418 MYOM3Q5VTT5 1437 aa17.25■□□□□ 0.35
TMC1-205ENST00000492418 SYCP2Q9BX26 1530 aa17.25■□□□□ 0.35
TMC1-205ENST00000492418 ARHGEF12Q9NZN5 1544 aa17.24■□□□□ 0.35
TMC1-205ENST00000492418 MIA2Q96PC5 1412 aa17.23■□□□□ 0.35
TMC1-205ENST00000492418 TSPY4P0CV99 314 aa17.23■□□□□ 0.35
TMC1-205ENST00000492418 TSPY10P0CW01 314 aa17.23■□□□□ 0.35
TMC1-205ENST00000492418 YEATS2Q9ULM3 1422 aa17.22■□□□□ 0.35
TMC1-205ENST00000492418 PPARGC1BQ86YN6 1023 aaKnown RBP17.22■□□□□ 0.35
TMC1-205ENST00000492418 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.35
TMC1-205ENST00000492418 KDM5CP41229 1560 aa17.21■□□□□ 0.35
TMC1-205ENST00000492418 HECW2Q9P2P5 1572 aa17.21■□□□□ 0.35
TMC1-205ENST00000492418 ATP10AO60312 1499 aa17.21■□□□□ 0.35
TMC1-205ENST00000492418 CAMSAP2Q08AD1 1489 aa17.21■□□□□ 0.35
TMC1-205ENST00000492418 MLH3Q9UHC1 1453 aa17.21■□□□□ 0.35
TMC1-205ENST00000492418 KDM4FA0A1W2PPD8 638 aa17.19■□□□□ 0.34
TMC1-205ENST00000492418 C9orf84Q5VXU9 1444 aa17.18■□□□□ 0.34
TMC1-205ENST00000492418 FAM50AQ14320 339 aaKnown RBP17.17■□□□□ 0.34
TMC1-205ENST00000492418 CCDC141Q6ZP82 1450 aa17.17■□□□□ 0.34
TMC1-205ENST00000492418 MLECQ14165 292 aa17.16■□□□□ 0.34
TMC1-205ENST00000492418 MBD5Q9P267 1494 aa17.16■□□□□ 0.34
TMC1-205ENST00000492418 FGD6Q6ZV73 1430 aa17.15■□□□□ 0.34
TMC1-205ENST00000492418 ESF1Q9H501 851 aaKnown RBP17.14■□□□□ 0.33
TMC1-205ENST00000492418 ATP7AQ04656 1500 aa17.13■□□□□ 0.33
TMC1-205ENST00000492418 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
TMC1-205ENST00000492418 ARHGEF5Q12774 1597 aa17.12■□□□□ 0.33
TMC1-205ENST00000492418 PTPN23Q9H3S7 1636 aa17.12■□□□□ 0.33
TMC1-205ENST00000492418 KIDINS220Q9ULH0 1771 aa17.12■□□□□ 0.33
TMC1-205ENST00000492418 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
TMC1-205ENST00000492418 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
TMC1-205ENST00000492418 INO80Q9ULG1 1556 aaPredicted RBP17.08■□□□□ 0.32
TMC1-205ENST00000492418 REREQ9P2R6 1566 aa17.07■□□□□ 0.32
TMC1-205ENST00000492418 A2MP01023 1474 aa17.07■□□□□ 0.32
TMC1-205ENST00000492418 BCORL1Q5H9F3 1711 aa17.07■□□□□ 0.32
TMC1-205ENST00000492418 TCOF1Q13428 1488 aaKnown RBP17.06■□□□□ 0.32
TMC1-205ENST00000492418 DHX29Q7Z478 1369 aaKnown RBP17.04■□□□□ 0.32
TMC1-205ENST00000492418 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
TMC1-205ENST00000492418 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
TMC1-205ENST00000492418 CHIC2Q9UKJ5 165 aa17.04■□□□□ 0.32
TMC1-205ENST00000492418 AGLP35573 1532 aa17.04■□□□□ 0.32
TMC1-205ENST00000492418 ABCC5O15440 1437 aa17.04■□□□□ 0.32
TMC1-205ENST00000492418 DAPK1P53355 1430 aa17.04■□□□□ 0.32
TMC1-205ENST00000492418 GGT6Q6P531 493 aa17.03■□□□□ 0.32
TMC1-205ENST00000492418 ADAMTSL3P82987 1691 aa17.02■□□□□ 0.32
TMC1-205ENST00000492418 KIF3BO15066 747 aa17.02■□□□□ 0.32
TMC1-205ENST00000492418 ITGAEP38570 1179 aa17.02■□□□□ 0.32
TMC1-205ENST00000492418 RRP7BPQ9NSQ0 103 aa17.02■□□□□ 0.32
TMC1-205ENST00000492418 ANKRD30AQ9BXX3 1397 aa17.02■□□□□ 0.31
TMC1-205ENST00000492418 MAST1Q9Y2H9 1570 aa17.01■□□□□ 0.31
TMC1-205ENST00000492418 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
TMC1-205ENST00000492418 DNMT1P26358 1616 aaKnown RBP17■□□□□ 0.31
TMC1-205ENST00000492418 MADDQ8WXG6 1647 aa17■□□□□ 0.31
TMC1-205ENST00000492418 SIGLEC1Q9BZZ2 1709 aa16.99■□□□□ 0.31
TMC1-205ENST00000492418 PPP6R1Q9UPN7 881 aa16.99■□□□□ 0.31
TMC1-205ENST00000492418 PTPRMP28827 1452 aa16.99■□□□□ 0.31
TMC1-205ENST00000492418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.97■□□□□ 0.31
TMC1-205ENST00000492418 KIF15Q9NS87 1388 aa16.97■□□□□ 0.31
TMC1-205ENST00000492418 RIMS1Q86UR5 1692 aaKnown RBP16.97■□□□□ 0.31
TMC1-205ENST00000492418 FER1L4A9Z1Z3 1794 aa16.97■□□□□ 0.31
TMC1-205ENST00000492418 PLXNC1O60486 1568 aa16.96■□□□□ 0.31
TMC1-205ENST00000492418 CROCC2H7BZ55 1655 aa16.96■□□□□ 0.31
TMC1-205ENST00000492418 CNTLNQ9NXG0 1405 aa16.96■□□□□ 0.3
TMC1-205ENST00000492418 DUOX2Q9NRD8 1548 aa16.95■□□□□ 0.3
TMC1-205ENST00000492418 WASHC2CQ9Y4E1 1318 aa16.94■□□□□ 0.3
TMC1-205ENST00000492418 NCOA1Q15788 1441 aa16.92■□□□□ 0.3
TMC1-205ENST00000492418 RRBP1Q9P2E9 1410 aaKnown RBP16.92■□□□□ 0.3
TMC1-205ENST00000492418 CEBPAP49715 358 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms