RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 KANK1Q14678 1352 aa6.31□□□□□ -1.4
TRA2B-215ENST00000492417 ARHGAP5Q13017 1502 aa6.31□□□□□ -1.4
TRA2B-215ENST00000492417 SCAPERQ9BY12 1400 aa6.31□□□□□ -1.4
TRA2B-215ENST00000492417 EFCAB5A4FU69 1503 aa6.31□□□□□ -1.4
TRA2B-215ENST00000492417 EPRSP07814 1512 aaKnown RBP6.31□□□□□ -1.4
TRA2B-215ENST00000492417 TROQ12816 1431 aaPredicted RBP6.3□□□□□ -1.4
TRA2B-215ENST00000492417 NCOA2Q15596 1464 aa6.3□□□□□ -1.4
TRA2B-215ENST00000492417 ARHGEF11O15085 1522 aa6.3□□□□□ -1.4
TRA2B-215ENST00000492417 LRRC9Q6ZRR7 1453 aa6.3□□□□□ -1.4
TRA2B-215ENST00000492417 CEP170Q5SW79 1584 aa6.3□□□□□ -1.4
TRA2B-215ENST00000492417 ASXL2Q76L83 1435 aa6.29□□□□□ -1.4
TRA2B-215ENST00000492417 FYCO1Q9BQS8 1478 aa6.28□□□□□ -1.4
TRA2B-215ENST00000492417 SAFB2Q14151 953 aaKnown RBP eCLIP6.28□□□□□ -1.4
TRA2B-215ENST00000492417 ATP10BO94823 1461 aa6.28□□□□□ -1.4
TRA2B-215ENST00000492417 SCAF1Q9H7N4 1312 aaKnown RBP6.28□□□□□ -1.4
TRA2B-215ENST00000492417 NEFLP07196 543 aa6.28□□□□□ -1.4
TRA2B-215ENST00000492417 DCAF11Q8TEB1 546 aa6.28□□□□□ -1.4
TRA2B-215ENST00000492417 MPHOSPH9Q99550 1183 aa6.28□□□□□ -1.4
TRA2B-215ENST00000492417 MYOM3Q5VTT5 1437 aa6.28□□□□□ -1.4
TRA2B-215ENST00000492417 CHD1O14646 1710 aa6.27□□□□□ -1.41
TRA2B-215ENST00000492417 RAB3GAP2Q9H2M9 1393 aa6.27□□□□□ -1.41
TRA2B-215ENST00000492417 FGD6Q6ZV73 1430 aa6.27□□□□□ -1.41
TRA2B-215ENST00000492417 SETD5Q9C0A6 1442 aa6.27□□□□□ -1.41
TRA2B-215ENST00000492417 PCF11O94913 1555 aaKnown RBP6.27□□□□□ -1.41
TRA2B-215ENST00000492417 STK26Q9P289 416 aa6.27□□□□□ -1.41
TRA2B-215ENST00000492417 DISP1Q96F81 1524 aa6.26□□□□□ -1.41
TRA2B-215ENST00000492417 ERCC6L2Q5T890 1561 aa6.26□□□□□ -1.41
TRA2B-215ENST00000492417 HECW1Q76N89 1606 aa6.26□□□□□ -1.41
TRA2B-215ENST00000492417 KIF15Q9NS87 1388 aa6.26□□□□□ -1.41
TRA2B-215ENST00000492417 CEBPAP49715 358 aaPredicted RBP6.25□□□□□ -1.41
TRA2B-215ENST00000492417 NUP153P49790 1475 aaKnown RBP6.25□□□□□ -1.41
TRA2B-215ENST00000492417 KIAA0556O60303 1618 aa6.24□□□□□ -1.41
TRA2B-215ENST00000492417 UGGT2Q9NYU1 1516 aa6.24□□□□□ -1.41
TRA2B-215ENST00000492417 POGKQ9P215 609 aa6.23□□□□□ -1.41
TRA2B-215ENST00000492417 ZBTB7CA1YPR0 619 aa6.23□□□□□ -1.41
TRA2B-215ENST00000492417 LMOD2Q6P5Q4 547 aa6.23□□□□□ -1.41
TRA2B-215ENST00000492417 TMC1Q8TDI8 760 aa6.23□□□□□ -1.41
TRA2B-215ENST00000492417 ADGRL1O94910 1474 aa6.22□□□□□ -1.41
TRA2B-215ENST00000492417 NUTM2FA1L443 756 aa6.22□□□□□ -1.41
TRA2B-215ENST00000492417 TIAM1Q13009 1591 aa6.22□□□□□ -1.41
TRA2B-215ENST00000492417 ABCC2Q92887 1545 aa6.22□□□□□ -1.41
TRA2B-215ENST00000492417 FANCAO15360 1455 aa6.22□□□□□ -1.41
TRA2B-215ENST00000492417 CARD11Q9BXL7 1154 aa6.22□□□□□ -1.41
TRA2B-215ENST00000492417 CTTNBP2Q8WZ74 1663 aa6.22□□□□□ -1.41
TRA2B-215ENST00000492417 RAPGEF6Q8TEU7 1601 aa6.22□□□□□ -1.41
TRA2B-215ENST00000492417 WDR7Q9Y4E6 1490 aa6.21□□□□□ -1.41
TRA2B-215ENST00000492417 EID1Q9Y6B2 187 aa6.21□□□□□ -1.41
TRA2B-215ENST00000492417 EHBP1L1Q8N3D4 1523 aa6.21□□□□□ -1.42
TRA2B-215ENST00000492417 HDGFP51858 240 aaKnown RBP6.21□□□□□ -1.42
TRA2B-215ENST00000492417 ANKRD50Q9ULJ7 1429 aa6.21□□□□□ -1.42
TRA2B-215ENST00000492417 AKNAQ7Z591 1439 aa6.2□□□□□ -1.42
TRA2B-215ENST00000492417 DDX10Q13206 875 aaKnown RBP6.2□□□□□ -1.42
TRA2B-215ENST00000492417 C9orf84Q5VXU9 1444 aa6.2□□□□□ -1.42
TRA2B-215ENST00000492417 WDR97A6NE52 1622 aa6.2□□□□□ -1.42
TRA2B-215ENST00000492417 FBXO31Q5XUX0 539 aaPredicted RBP6.19□□□□□ -1.42
TRA2B-215ENST00000492417 DENND4BO75064 1496 aaPredicted RBP6.19□□□□□ -1.42
TRA2B-215ENST00000492417 L3MBTL2Q969R5 705 aa6.18□□□□□ -1.42
TRA2B-215ENST00000492417 ADRA2BP18089 450 aa6.18□□□□□ -1.42
TRA2B-215ENST00000492417 DIEXFQ68CQ4 756 aaKnown RBP6.18□□□□□ -1.42
TRA2B-215ENST00000492417 KIF14Q15058 1648 aa6.18□□□□□ -1.42
TRA2B-215ENST00000492417 EIF4G2P78344 907 aaKnown RBP eCLIP6.18□□□□□ -1.42
TRA2B-215ENST00000492417 GPATCH8Q9UKJ3 1502 aaKnown RBP6.18□□□□□ -1.42
TRA2B-215ENST00000492417 ZNF316A6NFI3 1004 aaPredicted RBP6.18□□□□□ -1.42
TRA2B-215ENST00000492417 SOX12O15370 315 aa6.18□□□□□ -1.42
TRA2B-215ENST00000492417 HAP1P54257 671 aaPredicted RBP6.18□□□□□ -1.42
TRA2B-215ENST00000492417 PLCH2O75038 1416 aa6.17□□□□□ -1.42
TRA2B-215ENST00000492417 MIA2Q96PC5 1412 aa6.17□□□□□ -1.42
TRA2B-215ENST00000492417 TRAK1Q9UPV9 953 aa6.17□□□□□ -1.42
TRA2B-215ENST00000492417 SUPT6HQ7KZ85 1726 aaKnown RBP6.17□□□□□ -1.42
TRA2B-215ENST00000492417 ACIN1Q9UKV3 1341 aaKnown RBP6.17□□□□□ -1.42
TRA2B-215ENST00000492417 DAPK1P53355 1430 aa6.16□□□□□ -1.42
TRA2B-215ENST00000492417 TRAPPC8Q9Y2L5 1435 aa6.16□□□□□ -1.42
TRA2B-215ENST00000492417 CAMSAP2Q08AD1 1489 aa6.16□□□□□ -1.42
TRA2B-215ENST00000492417 PLEKHH2Q8IVE3 1493 aa6.16□□□□□ -1.42
TRA2B-215ENST00000492417 SRPK2P78362 688 aaKnown RBP6.16□□□□□ -1.42
TRA2B-215ENST00000492417 TXNDC2Q86VQ3 553 aa6.16□□□□□ -1.42
TRA2B-215ENST00000492417 A0A0G2JS52 829 aa6.16□□□□□ -1.42
TRA2B-215ENST00000492417 SLC26A8Q96RN1 970 aa6.15□□□□□ -1.42
TRA2B-215ENST00000492417 CCDC144AA2RUR9 1427 aa6.15□□□□□ -1.42
TRA2B-215ENST00000492417 ABCC5O15440 1437 aa6.15□□□□□ -1.42
TRA2B-215ENST00000492417 HSPA2P54652 639 aa6.15□□□□□ -1.43
TRA2B-215ENST00000492417 TMEM132EQ6IEE7 984 aa6.15□□□□□ -1.43
TRA2B-215ENST00000492417 CCDC141Q6ZP82 1450 aa6.15□□□□□ -1.43
TRA2B-215ENST00000492417 TEX14Q8IWB6 1497 aa6.15□□□□□ -1.43
TRA2B-215ENST00000492417 POGZQ7Z3K3 1410 aa6.15□□□□□ -1.43
TRA2B-215ENST00000492417 SENP3-EIF4A1A0A087X0R7 540 aa6.14□□□□□ -1.43
TRA2B-215ENST00000492417 PPM1GO15355 546 aaPredicted RBP6.14□□□□□ -1.43
TRA2B-215ENST00000492417 ANP32CO43423 234 aa6.14□□□□□ -1.43
TRA2B-215ENST00000492417 TSPOAP1O95153 1857 aa6.14□□□□□ -1.43
TRA2B-215ENST00000492417 TNNT2P45379 298 aaPredicted RBP6.14□□□□□ -1.43
TRA2B-215ENST00000492417 RBM33Q96EV2 1170 aaKnown RBP6.14□□□□□ -1.43
TRA2B-215ENST00000492417 GTF3C3Q9Y5Q9 886 aa6.14□□□□□ -1.43
TRA2B-215ENST00000492417 RRBP1Q9P2E9 1410 aaKnown RBP6.13□□□□□ -1.43
TRA2B-215ENST00000492417 RIMBP3CA6NJZ7 1639 aa6.13□□□□□ -1.43
TRA2B-215ENST00000492417 RIMBP3BA6NNM3 1639 aa6.13□□□□□ -1.43
TRA2B-215ENST00000492417 RIMBP3Q9UFD9 1639 aa6.13□□□□□ -1.43
TRA2B-215ENST00000492417 VGFO15240 615 aaPredicted RBP6.13□□□□□ -1.43
TRA2B-215ENST00000492417 PAK3O75914 559 aaPredicted RBP6.13□□□□□ -1.43
TRA2B-215ENST00000492417 SYCP2Q9BX26 1530 aa6.13□□□□□ -1.43
TRA2B-215ENST00000492417 SALL2Q9Y467 1007 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms