RNA–Protein interactions for RNA: ENST00000492305.1

TSPAN9-205, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 692 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-205ENST00000492305 RAPGEF3O95398 923 aa18.61■□□□□ 0.57
TSPAN9-205ENST00000492305 ARHGAP5Q13017 1502 aa18.6■□□□□ 0.57
TSPAN9-205ENST00000492305 ARHGEF40Q8TER5 1519 aa18.6■□□□□ 0.57
TSPAN9-205ENST00000492305 AKNAQ7Z591 1439 aa18.6■□□□□ 0.57
TSPAN9-205ENST00000492305 PHLDB1Q86UU1 1377 aa18.6■□□□□ 0.57
TSPAN9-205ENST00000492305 PREX2Q70Z35 1606 aa18.59■□□□□ 0.57
TSPAN9-205ENST00000492305 DENND4BO75064 1496 aaPredicted RBP18.58■□□□□ 0.57
TSPAN9-205ENST00000492305 PLCH2O75038 1416 aa18.58■□□□□ 0.57
TSPAN9-205ENST00000492305 CDC42BPBQ9Y5S2 1711 aa18.58■□□□□ 0.57
TSPAN9-205ENST00000492305 EHBP1L1Q8N3D4 1523 aa18.58■□□□□ 0.56
TSPAN9-205ENST00000492305 CDC42BPAQ5VT25 1732 aa18.57■□□□□ 0.56
TSPAN9-205ENST00000492305 ZMYM4Q5VZL5 1548 aa18.54■□□□□ 0.56
TSPAN9-205ENST00000492305 GPATCH8Q9UKJ3 1502 aaKnown RBP18.54■□□□□ 0.56
TSPAN9-205ENST00000492305 NCOA2Q15596 1464 aa18.53■□□□□ 0.56
TSPAN9-205ENST00000492305 EFCAB2Q5VUJ9 269 aa18.53■□□□□ 0.56
TSPAN9-205ENST00000492305 ZFYVE16Q7Z3T8 1539 aa18.53■□□□□ 0.56
TSPAN9-205ENST00000492305 CCNB3Q8WWL7 1395 aa18.53■□□□□ 0.56
TSPAN9-205ENST00000492305 POGZQ7Z3K3 1410 aa18.52■□□□□ 0.56
TSPAN9-205ENST00000492305 SIGLEC1Q9BZZ2 1709 aa18.51■□□□□ 0.55
TSPAN9-205ENST00000492305 ITSN2Q9NZM3 1697 aa18.5■□□□□ 0.55
TSPAN9-205ENST00000492305 SCAPERQ9BY12 1400 aa18.5■□□□□ 0.55
TSPAN9-205ENST00000492305 BCORL1Q5H9F3 1711 aa18.49■□□□□ 0.55
TSPAN9-205ENST00000492305 CFDP1Q9UEE9 299 aaPredicted RBP18.49■□□□□ 0.55
TSPAN9-205ENST00000492305 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
TSPAN9-205ENST00000492305 ABCC1P33527 1531 aa18.48■□□□□ 0.55
TSPAN9-205ENST00000492305 YEATS2Q9ULM3 1422 aa18.48■□□□□ 0.55
TSPAN9-205ENST00000492305 MADDQ8WXG6 1647 aa18.47■□□□□ 0.55
TSPAN9-205ENST00000492305 PPARGC1BQ86YN6 1023 aaKnown RBP18.46■□□□□ 0.55
TSPAN9-205ENST00000492305 ADAMTSL3P82987 1691 aa18.45■□□□□ 0.54
TSPAN9-205ENST00000492305 HECW2Q9P2P5 1572 aa18.45■□□□□ 0.54
TSPAN9-205ENST00000492305 ARID4BQ4LE39 1312 aaPredicted RBP18.45■□□□□ 0.54
TSPAN9-205ENST00000492305 RIMS1Q86UR5 1692 aaKnown RBP18.44■□□□□ 0.54
TSPAN9-205ENST00000492305 SUPT6HQ7KZ85 1726 aaKnown RBP18.43■□□□□ 0.54
TSPAN9-205ENST00000492305 KDM5CP41229 1560 aa18.43■□□□□ 0.54
TSPAN9-205ENST00000492305 SAMD9LQ8IVG5 1584 aa18.43■□□□□ 0.54
TSPAN9-205ENST00000492305 ZNF518AQ6AHZ1 1483 aa18.43■□□□□ 0.54
TSPAN9-205ENST00000492305 MYOM3Q5VTT5 1437 aa18.42■□□□□ 0.54
TSPAN9-205ENST00000492305 SYCP2Q9BX26 1530 aa18.42■□□□□ 0.54
TSPAN9-205ENST00000492305 MIA2Q96PC5 1412 aa18.41■□□□□ 0.54
TSPAN9-205ENST00000492305 ZNF644Q9H582 1327 aaPredicted RBP18.41■□□□□ 0.54
TSPAN9-205ENST00000492305 ABCA6Q8N139 1617 aa18.41■□□□□ 0.54
TSPAN9-205ENST00000492305 ZNF777Q9ULD5 760 aaPredicted RBP18.4■□□□□ 0.54
TSPAN9-205ENST00000492305 FER1L4A9Z1Z3 1794 aa18.4■□□□□ 0.54
TSPAN9-205ENST00000492305 KIAA1107Q9UPP5 1409 aa18.4■□□□□ 0.54
TSPAN9-205ENST00000492305 MAGI2Q86UL8 1455 aa18.39■□□□□ 0.54
TSPAN9-205ENST00000492305 ARHGEF12Q9NZN5 1544 aa18.39■□□□□ 0.54
TSPAN9-205ENST00000492305 DIP2CQ9Y2E4 1556 aa18.38■□□□□ 0.53
TSPAN9-205ENST00000492305 MYT1LQ9UL68 1186 aa18.38■□□□□ 0.53
TSPAN9-205ENST00000492305 HNRNPMP52272 730 aaKnown RBP eCLIP18.36■□□□□ 0.53
TSPAN9-205ENST00000492305 C9orf84Q5VXU9 1444 aa18.36■□□□□ 0.53
TSPAN9-205ENST00000492305 TRAPPC8Q9Y2L5 1435 aa18.36■□□□□ 0.53
TSPAN9-205ENST00000492305 FGD6Q6ZV73 1430 aa18.35■□□□□ 0.53
TSPAN9-205ENST00000492305 PTPRMP28827 1452 aa18.34■□□□□ 0.53
TSPAN9-205ENST00000492305 PLEKHH2Q8IVE3 1493 aa18.34■□□□□ 0.53
TSPAN9-205ENST00000492305 RSPH4AQ5TD94 716 aa18.34■□□□□ 0.53
TSPAN9-205ENST00000492305 AFAP1Q8N556 730 aa18.34■□□□□ 0.53
TSPAN9-205ENST00000492305 KIDINS220Q9ULH0 1771 aa18.34■□□□□ 0.53
TSPAN9-205ENST00000492305 MBD5Q9P267 1494 aa18.33■□□□□ 0.53
TSPAN9-205ENST00000492305 MLECQ14165 292 aa18.32■□□□□ 0.52
TSPAN9-205ENST00000492305 ATP10AO60312 1499 aa18.32■□□□□ 0.52
TSPAN9-205ENST00000492305 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
TSPAN9-205ENST00000492305 TCOF1Q13428 1488 aaKnown RBP18.3■□□□□ 0.52
TSPAN9-205ENST00000492305 INO80Q9ULG1 1556 aaPredicted RBP18.29■□□□□ 0.52
TSPAN9-205ENST00000492305 CAMSAP2Q08AD1 1489 aa18.28■□□□□ 0.52
TSPAN9-205ENST00000492305 MLH3Q9UHC1 1453 aa18.28■□□□□ 0.52
TSPAN9-205ENST00000492305 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.28■□□□□ 0.52
TSPAN9-205ENST00000492305 ATP7AQ04656 1500 aa18.27■□□□□ 0.51
TSPAN9-205ENST00000492305 REREQ9P2R6 1566 aa18.26■□□□□ 0.51
TSPAN9-205ENST00000492305 RRBP1Q9P2E9 1410 aaKnown RBP18.26■□□□□ 0.51
TSPAN9-205ENST00000492305 FAM50AQ14320 339 aaKnown RBP18.24■□□□□ 0.51
TSPAN9-205ENST00000492305 ABCC5O15440 1437 aa18.23■□□□□ 0.51
TSPAN9-205ENST00000492305 SPAG9O60271 1321 aaKnown RBP18.23■□□□□ 0.51
TSPAN9-205ENST00000492305 TSPY4P0CV99 314 aa18.22■□□□□ 0.51
TSPAN9-205ENST00000492305 TSPY10P0CW01 314 aa18.22■□□□□ 0.51
TSPAN9-205ENST00000492305 PTPN23Q9H3S7 1636 aa18.22■□□□□ 0.51
TSPAN9-205ENST00000492305 ADGBQ8N7X0 1667 aa18.21■□□□□ 0.51
TSPAN9-205ENST00000492305 CCDC141Q6ZP82 1450 aa18.2■□□□□ 0.5
TSPAN9-205ENST00000492305 RTEL1-TNFRSF6BF6WH68 1400 aa18.2■□□□□ 0.5
TSPAN9-205ENST00000492305 ARHGEF5Q12774 1597 aa18.2■□□□□ 0.5
TSPAN9-205ENST00000492305 PLXNC1O60486 1568 aa18.17■□□□□ 0.5
TSPAN9-205ENST00000492305 DAPK1P53355 1430 aa18.17■□□□□ 0.5
TSPAN9-205ENST00000492305 AGLP35573 1532 aa18.17■□□□□ 0.5
TSPAN9-205ENST00000492305 C3P01024 1663 aa18.16■□□□□ 0.5
TSPAN9-205ENST00000492305 LMTK3Q96Q04 1460 aa18.15■□□□□ 0.5
TSPAN9-205ENST00000492305 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
TSPAN9-205ENST00000492305 PREX1Q8TCU6 1659 aa18.14■□□□□ 0.49
TSPAN9-205ENST00000492305 CLTCQ00610 1675 aaKnown RBP18.13■□□□□ 0.49
TSPAN9-205ENST00000492305 A2MP01023 1474 aa18.13■□□□□ 0.49
TSPAN9-205ENST00000492305 SHANK2Q9UPX8 1470 aa18.12■□□□□ 0.49
TSPAN9-205ENST00000492305 CHIC2Q9UKJ5 165 aa18.1■□□□□ 0.49
TSPAN9-205ENST00000492305 CROCC2H7BZ55 1655 aa18.09■□□□□ 0.49
TSPAN9-205ENST00000492305 DNMT1P26358 1616 aaKnown RBP18.09■□□□□ 0.49
TSPAN9-205ENST00000492305 MAST1Q9Y2H9 1570 aa18.09■□□□□ 0.49
TSPAN9-205ENST00000492305 NCOA1Q15788 1441 aa18.09■□□□□ 0.49
TSPAN9-205ENST00000492305 CEBPAP49715 358 aaPredicted RBP18.09■□□□□ 0.49
TSPAN9-205ENST00000492305 MROH2AA6NES4 1674 aa18.09■□□□□ 0.49
TSPAN9-205ENST00000492305 ROCK1Q13464 1354 aa18.08■□□□□ 0.49
TSPAN9-205ENST00000492305 DHX29Q7Z478 1369 aaKnown RBP18.08■□□□□ 0.49
TSPAN9-205ENST00000492305 ITGAEP38570 1179 aa18.08■□□□□ 0.48
TSPAN9-205ENST00000492305 ANKRD30AQ9BXX3 1397 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms