RNA–Protein interactions for RNA: ENST00000491974.1

SNHG28-202, Transcript of small nucleolar RNA host gene 28, humanhuman

TSL 2

Gene SNHG28, Length 1,064 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-202ENST00000491974 ZNF777Q9ULD5 760 aaPredicted RBP25.55■■□□□ 1.68
SNHG28-202ENST00000491974 TSPOAP1O95153 1857 aa25.55■■□□□ 1.68
SNHG28-202ENST00000491974 PPRC1Q5VV67 1664 aaKnown RBP25.54■■□□□ 1.68
SNHG28-202ENST00000491974 MYOM3Q5VTT5 1437 aa25.54■■□□□ 1.68
SNHG28-202ENST00000491974 AKNAQ7Z591 1439 aa25.54■■□□□ 1.68
SNHG28-202ENST00000491974 MYO5CQ9NQX4 1742 aa25.52■■□□□ 1.68
SNHG28-202ENST00000491974 PREX2Q70Z35 1606 aa25.5■■□□□ 1.67
SNHG28-202ENST00000491974 MIA2Q96PC5 1412 aa25.49■■□□□ 1.67
SNHG28-202ENST00000491974 CDC42BPAQ5VT25 1732 aa25.48■■□□□ 1.67
SNHG28-202ENST00000491974 ZNF644Q9H582 1327 aaPredicted RBP25.47■■□□□ 1.67
SNHG28-202ENST00000491974 CDC42BPBQ9Y5S2 1711 aa25.46■■□□□ 1.67
SNHG28-202ENST00000491974 SCAPERQ9BY12 1400 aa25.46■■□□□ 1.67
SNHG28-202ENST00000491974 CFAP74Q9C0B2 1584 aa25.45■■□□□ 1.66
SNHG28-202ENST00000491974 ADGRL1O94910 1474 aa25.44■■□□□ 1.66
SNHG28-202ENST00000491974 ITSN2Q9NZM3 1697 aa25.44■■□□□ 1.66
SNHG28-202ENST00000491974 FGD6Q6ZV73 1430 aa25.43■■□□□ 1.66
SNHG28-202ENST00000491974 PLEKHH2Q8IVE3 1493 aa25.42■■□□□ 1.66
SNHG28-202ENST00000491974 COL17A1Q9UMD9 1497 aaPredicted RBP25.42■■□□□ 1.66
SNHG28-202ENST00000491974 HNRNPMP52272 730 aaKnown RBP eCLIP25.42■■□□□ 1.66
SNHG28-202ENST00000491974 KIAA1107Q9UPP5 1409 aa25.42■■□□□ 1.66
SNHG28-202ENST00000491974 RAPGEF3O95398 923 aa25.41■■□□□ 1.66
SNHG28-202ENST00000491974 DENND4BO75064 1496 aaPredicted RBP25.4■■□□□ 1.66
SNHG28-202ENST00000491974 SAMD9LQ8IVG5 1584 aa25.38■■□□□ 1.65
SNHG28-202ENST00000491974 ARHGEF12Q9NZN5 1544 aa25.37■■□□□ 1.65
SNHG28-202ENST00000491974 CAMSAP2Q08AD1 1489 aa25.36■■□□□ 1.65
SNHG28-202ENST00000491974 RSPH4AQ5TD94 716 aa25.36■■□□□ 1.65
SNHG28-202ENST00000491974 AFAP1Q8N556 730 aa25.36■■□□□ 1.65
SNHG28-202ENST00000491974 FAM50AQ14320 339 aaKnown RBP25.35■■□□□ 1.65
SNHG28-202ENST00000491974 ABCC1P33527 1531 aa25.35■■□□□ 1.65
SNHG28-202ENST00000491974 KDM6BO15054 1643 aa25.34■■□□□ 1.65
SNHG28-202ENST00000491974 POGZQ7Z3K3 1410 aa25.33■■□□□ 1.65
SNHG28-202ENST00000491974 TRAPPC8Q9Y2L5 1435 aa25.33■■□□□ 1.65
SNHG28-202ENST00000491974 TCOF1Q13428 1488 aaKnown RBP25.33■■□□□ 1.65
SNHG28-202ENST00000491974 MBD5Q9P267 1494 aa25.32■■□□□ 1.64
SNHG28-202ENST00000491974 SYCP2Q9BX26 1530 aa25.31■■□□□ 1.64
SNHG28-202ENST00000491974 PTPN23Q9H3S7 1636 aa25.3■■□□□ 1.64
SNHG28-202ENST00000491974 ZNF518AQ6AHZ1 1483 aa25.29■■□□□ 1.64
SNHG28-202ENST00000491974 RRBP1Q9P2E9 1410 aaKnown RBP25.29■■□□□ 1.64
SNHG28-202ENST00000491974 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.27■■□□□ 1.64
SNHG28-202ENST00000491974 TSPY4P0CV99 314 aa25.26■■□□□ 1.63
SNHG28-202ENST00000491974 TSPY10P0CW01 314 aa25.26■■□□□ 1.63
SNHG28-202ENST00000491974 MYT1LQ9UL68 1186 aa25.25■■□□□ 1.63
SNHG28-202ENST00000491974 SPAG9O60271 1321 aaKnown RBP25.25■■□□□ 1.63
SNHG28-202ENST00000491974 CCDC141Q6ZP82 1450 aa25.24■■□□□ 1.63
SNHG28-202ENST00000491974 FRMPD1Q5SYB0 1578 aa25.22■■□□□ 1.63
SNHG28-202ENST00000491974 ARHGEF5Q12774 1597 aa25.22■■□□□ 1.63
SNHG28-202ENST00000491974 ABCC5O15440 1437 aa25.2■■□□□ 1.63
SNHG28-202ENST00000491974 MAGI2Q86UL8 1455 aa25.2■■□□□ 1.62
SNHG28-202ENST00000491974 RICTORQ6R327 1708 aa25.2■■□□□ 1.62
SNHG28-202ENST00000491974 KDM5CP41229 1560 aa25.19■■□□□ 1.62
SNHG28-202ENST00000491974 MLH3Q9UHC1 1453 aa25.19■■□□□ 1.62
SNHG28-202ENST00000491974 ZMYM4Q5VZL5 1548 aa25.18■■□□□ 1.62
SNHG28-202ENST00000491974 DAPK1P53355 1430 aa25.18■■□□□ 1.62
SNHG28-202ENST00000491974 RTEL1-TNFRSF6BF6WH68 1400 aa25.16■■□□□ 1.62
SNHG28-202ENST00000491974 ITGAEP38570 1179 aa25.16■■□□□ 1.62
SNHG28-202ENST00000491974 C9orf84Q5VXU9 1444 aa25.13■■□□□ 1.61
SNHG28-202ENST00000491974 YEATS2Q9ULM3 1422 aa25.13■■□□□ 1.61
SNHG28-202ENST00000491974 CHIC2Q9UKJ5 165 aa25.13■■□□□ 1.61
SNHG28-202ENST00000491974 DNMT1P26358 1616 aaKnown RBP25.12■■□□□ 1.61
SNHG28-202ENST00000491974 ZFYVE16Q7Z3T8 1539 aa25.11■■□□□ 1.61
SNHG28-202ENST00000491974 SHANK2Q9UPX8 1470 aa25.1■■□□□ 1.61
SNHG28-202ENST00000491974 HECW2Q9P2P5 1572 aa25.1■■□□□ 1.61
SNHG28-202ENST00000491974 PTPRKQ15262 1439 aa25.09■■□□□ 1.61
SNHG28-202ENST00000491974 ATP7AQ04656 1500 aa25.08■■□□□ 1.61
SNHG28-202ENST00000491974 ATP10AO60312 1499 aa25.07■■□□□ 1.6
SNHG28-202ENST00000491974 MAST1Q9Y2H9 1570 aa25.06■■□□□ 1.6
SNHG28-202ENST00000491974 ANKRD30AQ9BXX3 1397 aa25.05■■□□□ 1.6
SNHG28-202ENST00000491974 INO80Q9ULG1 1556 aaPredicted RBP25.05■■□□□ 1.6
SNHG28-202ENST00000491974 RRP7BPQ9NSQ0 103 aa25.05■■□□□ 1.6
SNHG28-202ENST00000491974 KIDINS220Q9ULH0 1771 aa25.03■■□□□ 1.6
SNHG28-202ENST00000491974 ARHGEF40Q8TER5 1519 aa25.03■■□□□ 1.6
SNHG28-202ENST00000491974 NCOA1Q15788 1441 aa25.02■■□□□ 1.6
SNHG28-202ENST00000491974 ROCK1Q13464 1354 aa25.01■■□□□ 1.59
SNHG28-202ENST00000491974 DHX29Q7Z478 1369 aaKnown RBP25■■□□□ 1.59
SNHG28-202ENST00000491974 KIF15Q9NS87 1388 aa25■■□□□ 1.59
SNHG28-202ENST00000491974 ADGRL2O95490 1459 aa25■■□□□ 1.59
SNHG28-202ENST00000491974 DIP2CQ9Y2E4 1556 aa25■■□□□ 1.59
SNHG28-202ENST00000491974 CROCC2H7BZ55 1655 aa24.98■■□□□ 1.59
SNHG28-202ENST00000491974 ABCA6Q8N139 1617 aa24.98■■□□□ 1.59
SNHG28-202ENST00000491974 A2MP01023 1474 aa24.98■■□□□ 1.59
SNHG28-202ENST00000491974 ARID4BQ4LE39 1312 aaPredicted RBP24.98■■□□□ 1.59
SNHG28-202ENST00000491974 TRIM26Q12899 539 aaPredicted RBP24.97■■□□□ 1.59
SNHG28-202ENST00000491974 PLXNC1O60486 1568 aa24.94■■□□□ 1.58
SNHG28-202ENST00000491974 REREQ9P2R6 1566 aa24.93■■□□□ 1.58
SNHG28-202ENST00000491974 DUOX2Q9NRD8 1548 aa24.91■■□□□ 1.58
SNHG28-202ENST00000491974 KIF3BO15066 747 aa24.9■■□□□ 1.58
SNHG28-202ENST00000491974 AGLP35573 1532 aa24.89■■□□□ 1.57
SNHG28-202ENST00000491974 ADGBQ8N7X0 1667 aa24.88■■□□□ 1.57
SNHG28-202ENST00000491974 ANKRD50Q9ULJ7 1429 aa24.87■■□□□ 1.57
SNHG28-202ENST00000491974 ERBINQ96RT1 1412 aa24.86■■□□□ 1.57
SNHG28-202ENST00000491974 MLECQ14165 292 aa24.86■■□□□ 1.57
SNHG28-202ENST00000491974 HFM1A2PYH4 1435 aa24.85■■□□□ 1.57
SNHG28-202ENST00000491974 NAIPQ13075 1403 aa24.85■■□□□ 1.57
SNHG28-202ENST00000491974 GGT6Q6P531 493 aa24.84■■□□□ 1.57
SNHG28-202ENST00000491974 SIGLEC1Q9BZZ2 1709 aa24.79■■□□□ 1.56
SNHG28-202ENST00000491974 PPP6R1Q9UPN7 881 aa24.79■■□□□ 1.56
SNHG28-202ENST00000491974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.76■■□□□ 1.55
SNHG28-202ENST00000491974 SETD5Q9C0A6 1442 aa24.76■■□□□ 1.55
SNHG28-202ENST00000491974 ESF1Q9H501 851 aaKnown RBP24.75■■□□□ 1.55
SNHG28-202ENST00000491974 EIF2AK4Q9P2K8 1649 aaKnown RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms