RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 ZNF777Q9ULD5 760 aaPredicted RBP14.26□□□□□ -0.13
COL6A4P1-203ENST00000491915 ARHGAP5Q13017 1502 aa14.25□□□□□ -0.13
COL6A4P1-203ENST00000491915 POGZQ7Z3K3 1410 aa14.25□□□□□ -0.13
COL6A4P1-203ENST00000491915 MYO5CQ9NQX4 1742 aa14.24□□□□□ -0.13
COL6A4P1-203ENST00000491915 MLECQ14165 292 aa14.24□□□□□ -0.13
COL6A4P1-203ENST00000491915 CFAP74Q9C0B2 1584 aa14.24□□□□□ -0.13
COL6A4P1-203ENST00000491915 ARHGEF12Q9NZN5 1544 aa14.24□□□□□ -0.13
COL6A4P1-203ENST00000491915 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
COL6A4P1-203ENST00000491915 TRAPPC8Q9Y2L5 1435 aa14.24□□□□□ -0.13
COL6A4P1-203ENST00000491915 HNRNPMP52272 730 aaKnown RBP eCLIP14.23□□□□□ -0.13
COL6A4P1-203ENST00000491915 GPATCH8Q9UKJ3 1502 aaKnown RBP14.23□□□□□ -0.13
COL6A4P1-203ENST00000491915 ZMYM4Q5VZL5 1548 aa14.22□□□□□ -0.13
COL6A4P1-203ENST00000491915 MYT1LQ9UL68 1186 aa14.22□□□□□ -0.13
COL6A4P1-203ENST00000491915 MAGI2Q86UL8 1455 aa14.22□□□□□ -0.13
COL6A4P1-203ENST00000491915 ADAMTSL3P82987 1691 aa14.21□□□□□ -0.13
COL6A4P1-203ENST00000491915 CFDP1Q9UEE9 299 aaPredicted RBP14.21□□□□□ -0.13
COL6A4P1-203ENST00000491915 MTUS2Q5JR59 1369 aa14.21□□□□□ -0.14
COL6A4P1-203ENST00000491915 ZNF644Q9H582 1327 aaPredicted RBP14.2□□□□□ -0.14
COL6A4P1-203ENST00000491915 ATP10AO60312 1499 aa14.2□□□□□ -0.14
COL6A4P1-203ENST00000491915 ZFYVE16Q7Z3T8 1539 aa14.2□□□□□ -0.14
COL6A4P1-203ENST00000491915 SIGLEC1Q9BZZ2 1709 aa14.19□□□□□ -0.14
COL6A4P1-203ENST00000491915 ARHGEF40Q8TER5 1519 aa14.19□□□□□ -0.14
COL6A4P1-203ENST00000491915 PTPRMP28827 1452 aa14.18□□□□□ -0.14
COL6A4P1-203ENST00000491915 PLPPR3Q6T4P5 718 aa14.18□□□□□ -0.14
COL6A4P1-203ENST00000491915 CCNB3Q8WWL7 1395 aa14.18□□□□□ -0.14
COL6A4P1-203ENST00000491915 KANK4Q5T7N3 995 aaPredicted RBP14.17□□□□□ -0.14
COL6A4P1-203ENST00000491915 BCORL1Q5H9F3 1711 aa14.17□□□□□ -0.14
COL6A4P1-203ENST00000491915 CDC42BPAQ5VT25 1732 aa14.17□□□□□ -0.14
COL6A4P1-203ENST00000491915 ZNF518AQ6AHZ1 1483 aa14.17□□□□□ -0.14
COL6A4P1-203ENST00000491915 PREX2Q70Z35 1606 aa14.16□□□□□ -0.14
COL6A4P1-203ENST00000491915 MLH3Q9UHC1 1453 aa14.14□□□□□ -0.15
COL6A4P1-203ENST00000491915 ABCC1P33527 1531 aa14.14□□□□□ -0.15
COL6A4P1-203ENST00000491915 C9orf84Q5VXU9 1444 aa14.14□□□□□ -0.15
COL6A4P1-203ENST00000491915 VPS8Q8N3P4 1428 aa14.14□□□□□ -0.15
COL6A4P1-203ENST00000491915 KDM5CP41229 1560 aa14.13□□□□□ -0.15
COL6A4P1-203ENST00000491915 MADDQ8WXG6 1647 aa14.13□□□□□ -0.15
COL6A4P1-203ENST00000491915 CEBPAP49715 358 aaPredicted RBP14.13□□□□□ -0.15
COL6A4P1-203ENST00000491915 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
COL6A4P1-203ENST00000491915 KIAA1107Q9UPP5 1409 aa14.12□□□□□ -0.15
COL6A4P1-203ENST00000491915 SAMD9LQ8IVG5 1584 aa14.12□□□□□ -0.15
COL6A4P1-203ENST00000491915 HECW2Q9P2P5 1572 aa14.11□□□□□ -0.15
COL6A4P1-203ENST00000491915 ITSN2Q9NZM3 1697 aa14.1□□□□□ -0.15
COL6A4P1-203ENST00000491915 NCOA2Q15596 1464 aa14.09□□□□□ -0.15
COL6A4P1-203ENST00000491915 DIP2CQ9Y2E4 1556 aa14.09□□□□□ -0.15
COL6A4P1-203ENST00000491915 RIMS1Q86UR5 1692 aaKnown RBP14.08□□□□□ -0.16
COL6A4P1-203ENST00000491915 EHBP1L1Q8N3D4 1523 aa14.08□□□□□ -0.16
COL6A4P1-203ENST00000491915 SYCP2Q9BX26 1530 aa14.08□□□□□ -0.16
COL6A4P1-203ENST00000491915 KIDINS220Q9ULH0 1771 aa14.08□□□□□ -0.16
COL6A4P1-203ENST00000491915 TIAM1Q13009 1591 aa14.08□□□□□ -0.16
COL6A4P1-203ENST00000491915 MBD5Q9P267 1494 aa14.07□□□□□ -0.16
COL6A4P1-203ENST00000491915 HSPA2P54652 639 aa14.07□□□□□ -0.16
COL6A4P1-203ENST00000491915 LRRC9Q6ZRR7 1453 aa14.06□□□□□ -0.16
COL6A4P1-203ENST00000491915 ABCA6Q8N139 1617 aa14.06□□□□□ -0.16
COL6A4P1-203ENST00000491915 PLEKHH2Q8IVE3 1493 aa14.06□□□□□ -0.16
COL6A4P1-203ENST00000491915 AGLP35573 1532 aa14.03□□□□□ -0.16
COL6A4P1-203ENST00000491915 REREQ9P2R6 1566 aa14.02□□□□□ -0.16
COL6A4P1-203ENST00000491915 RSPH4AQ5TD94 716 aa14.02□□□□□ -0.17
COL6A4P1-203ENST00000491915 MAP3K1Q13233 1512 aa14.01□□□□□ -0.17
COL6A4P1-203ENST00000491915 LMTK3Q96Q04 1460 aa14.01□□□□□ -0.17
COL6A4P1-203ENST00000491915 APLP2Q06481 763 aa14.01□□□□□ -0.17
COL6A4P1-203ENST00000491915 GGT6Q6P531 493 aa14.01□□□□□ -0.17
COL6A4P1-203ENST00000491915 ESF1Q9H501 851 aaKnown RBP14□□□□□ -0.17
COL6A4P1-203ENST00000491915 SUPT6HQ7KZ85 1726 aaKnown RBP14□□□□□ -0.17
COL6A4P1-203ENST00000491915 FER1L4A9Z1Z3 1794 aa13.99□□□□□ -0.17
COL6A4P1-203ENST00000491915 ATP7AQ04656 1500 aa13.99□□□□□ -0.17
COL6A4P1-203ENST00000491915 A2MP01023 1474 aa13.99□□□□□ -0.17
COL6A4P1-203ENST00000491915 TSPY4P0CV99 314 aa13.98□□□□□ -0.17
COL6A4P1-203ENST00000491915 TSPY10P0CW01 314 aa13.98□□□□□ -0.17
COL6A4P1-203ENST00000491915 CAMSAP2Q08AD1 1489 aa13.98□□□□□ -0.17
COL6A4P1-203ENST00000491915 RTEL1-TNFRSF6BF6WH68 1400 aa13.98□□□□□ -0.17
COL6A4P1-203ENST00000491915 DHX29Q7Z478 1369 aaKnown RBP13.97□□□□□ -0.17
COL6A4P1-203ENST00000491915 ZMYM3Q14202 1370 aa13.96□□□□□ -0.17
COL6A4P1-203ENST00000491915 KIF3BO15066 747 aa13.96□□□□□ -0.17
COL6A4P1-203ENST00000491915 INO80Q9ULG1 1556 aaPredicted RBP13.96□□□□□ -0.18
COL6A4P1-203ENST00000491915 SETD1BQ9UPS6 1966 aaKnown RBP13.95□□□□□ -0.18
COL6A4P1-203ENST00000491915 ILDR1Q86SU0 546 aaPredicted RBP13.95□□□□□ -0.18
COL6A4P1-203ENST00000491915 MYOM3Q5VTT5 1437 aa13.94□□□□□ -0.18
COL6A4P1-203ENST00000491915 CCDC141Q6ZP82 1450 aa13.93□□□□□ -0.18
COL6A4P1-203ENST00000491915 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
COL6A4P1-203ENST00000491915 MIA2Q96PC5 1412 aa13.92□□□□□ -0.18
COL6A4P1-203ENST00000491915 PLXNC1O60486 1568 aa13.92□□□□□ -0.18
COL6A4P1-203ENST00000491915 CNTLNQ9NXG0 1405 aa13.91□□□□□ -0.18
COL6A4P1-203ENST00000491915 ARHGEF5Q12774 1597 aa13.9□□□□□ -0.18
COL6A4P1-203ENST00000491915 C3P01024 1663 aa13.9□□□□□ -0.18
COL6A4P1-203ENST00000491915 FBXO31Q5XUX0 539 aaPredicted RBP13.89□□□□□ -0.19
COL6A4P1-203ENST00000491915 PPARGC1BQ86YN6 1023 aaKnown RBP13.88□□□□□ -0.19
COL6A4P1-203ENST00000491915 ABCC5O15440 1437 aa13.88□□□□□ -0.19
COL6A4P1-203ENST00000491915 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
COL6A4P1-203ENST00000491915 RRP7BPQ9NSQ0 103 aa13.87□□□□□ -0.19
COL6A4P1-203ENST00000491915 CHIC2Q9UKJ5 165 aa13.87□□□□□ -0.19
COL6A4P1-203ENST00000491915 UHRF1BP1Q6BDS2 1440 aa13.87□□□□□ -0.19
COL6A4P1-203ENST00000491915 PTPRKQ15262 1439 aa13.86□□□□□ -0.19
COL6A4P1-203ENST00000491915 WASHC2CQ9Y4E1 1318 aa13.86□□□□□ -0.19
COL6A4P1-203ENST00000491915 CLTCQ00610 1675 aaKnown RBP13.85□□□□□ -0.19
COL6A4P1-203ENST00000491915 FGD6Q6ZV73 1430 aa13.84□□□□□ -0.19
COL6A4P1-203ENST00000491915 PREX1Q8TCU6 1659 aa13.84□□□□□ -0.19
COL6A4P1-203ENST00000491915 NPATQ14207 1427 aa13.83□□□□□ -0.2
COL6A4P1-203ENST00000491915 FAM50AQ14320 339 aaKnown RBP13.83□□□□□ -0.2
COL6A4P1-203ENST00000491915 MAST1Q9Y2H9 1570 aa13.82□□□□□ -0.2
COL6A4P1-203ENST00000491915 NCKAP5LQ9HCH0 1330 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms