RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 PLCH2O75038 1416 aa14.27□□□□□ -0.12
NUP50-217ENST00000491860 EHMT2Q96KQ7 1210 aa14.27□□□□□ -0.13
NUP50-217ENST00000491860 MYO5CQ9NQX4 1742 aa14.27□□□□□ -0.13
NUP50-217ENST00000491860 KIF14Q15058 1648 aa14.26□□□□□ -0.13
NUP50-217ENST00000491860 CCDC18Q5T9S5 1454 aa14.26□□□□□ -0.13
NUP50-217ENST00000491860 ZFYVE16Q7Z3T8 1539 aa14.25□□□□□ -0.13
NUP50-217ENST00000491860 TROQ12816 1431 aaPredicted RBP14.24□□□□□ -0.13
NUP50-217ENST00000491860 SIGLEC1Q9BZZ2 1709 aa14.24□□□□□ -0.13
NUP50-217ENST00000491860 EFCAB2Q5VUJ9 269 aa14.24□□□□□ -0.13
NUP50-217ENST00000491860 CASKIN1Q8WXD9 1431 aa14.23□□□□□ -0.13
NUP50-217ENST00000491860 FER1L4A9Z1Z3 1794 aa14.22□□□□□ -0.13
NUP50-217ENST00000491860 CERKQ8TCT0 537 aa14.22□□□□□ -0.13
NUP50-217ENST00000491860 YEATS2Q9ULM3 1422 aa14.22□□□□□ -0.13
NUP50-217ENST00000491860 HSPA2P54652 639 aa14.21□□□□□ -0.13
NUP50-217ENST00000491860 SCAPERQ9BY12 1400 aa14.21□□□□□ -0.13
NUP50-217ENST00000491860 ARHGEF12Q9NZN5 1544 aa14.2□□□□□ -0.14
NUP50-217ENST00000491860 FYCO1Q9BQS8 1478 aa14.19□□□□□ -0.14
NUP50-217ENST00000491860 PREX1Q8TCU6 1659 aa14.19□□□□□ -0.14
NUP50-217ENST00000491860 ZNF518AQ6AHZ1 1483 aa14.18□□□□□ -0.14
NUP50-217ENST00000491860 ARHGAP5Q13017 1502 aa14.18□□□□□ -0.14
NUP50-217ENST00000491860 LRRIQ1Q96JM4 1722 aa14.18□□□□□ -0.14
NUP50-217ENST00000491860 ATP10AO60312 1499 aa14.16□□□□□ -0.14
NUP50-217ENST00000491860 PREX2Q70Z35 1606 aa14.14□□□□□ -0.15
NUP50-217ENST00000491860 C9orf84Q5VXU9 1444 aa14.14□□□□□ -0.15
NUP50-217ENST00000491860 KDM5CP41229 1560 aa14.13□□□□□ -0.15
NUP50-217ENST00000491860 STRCQ7RTU9 1775 aa14.12□□□□□ -0.15
NUP50-217ENST00000491860 CDC42BPBQ9Y5S2 1711 aa14.12□□□□□ -0.15
NUP50-217ENST00000491860 DMRT2Q9Y5R5 561 aa14.11□□□□□ -0.15
NUP50-217ENST00000491860 MLECQ14165 292 aa14.1□□□□□ -0.15
NUP50-217ENST00000491860 REREQ9P2R6 1566 aa14.09□□□□□ -0.15
NUP50-217ENST00000491860 SETD1BQ9UPS6 1966 aaKnown RBP14.09□□□□□ -0.15
NUP50-217ENST00000491860 PLPPR3Q6T4P5 718 aa14.09□□□□□ -0.15
NUP50-217ENST00000491860 MLH3Q9UHC1 1453 aa14.09□□□□□ -0.15
NUP50-217ENST00000491860 MYT1LQ9UL68 1186 aa14.08□□□□□ -0.16
NUP50-217ENST00000491860 ABCC1P33527 1531 aa14.08□□□□□ -0.16
NUP50-217ENST00000491860 UHRF1BP1Q6BDS2 1440 aa14.07□□□□□ -0.16
NUP50-217ENST00000491860 CDC42BPAQ5VT25 1732 aa14.07□□□□□ -0.16
NUP50-217ENST00000491860 ITSN2Q9NZM3 1697 aa14.07□□□□□ -0.16
NUP50-217ENST00000491860 PTPRTO14522 1441 aa14.07□□□□□ -0.16
NUP50-217ENST00000491860 SOCS7O14512 581 aa14.06□□□□□ -0.16
NUP50-217ENST00000491860 PLEKHH2Q8IVE3 1493 aa14.06□□□□□ -0.16
NUP50-217ENST00000491860 AFAP1Q8N556 730 aa14.05□□□□□ -0.16
NUP50-217ENST00000491860 MTUS2Q5JR59 1369 aa14.05□□□□□ -0.16
NUP50-217ENST00000491860 DISP3Q9P2K9 1392 aa14.05□□□□□ -0.16
NUP50-217ENST00000491860 DIP2CQ9Y2E4 1556 aa14.05□□□□□ -0.16
NUP50-217ENST00000491860 IQSEC2Q5JU85 1478 aa14.04□□□□□ -0.16
NUP50-217ENST00000491860 CEBPAP49715 358 aaPredicted RBP14.03□□□□□ -0.16
NUP50-217ENST00000491860 ILDR2Q71H61 639 aa14.03□□□□□ -0.16
NUP50-217ENST00000491860 AGLP35573 1532 aa14.03□□□□□ -0.16
NUP50-217ENST00000491860 C3P01024 1663 aa14.03□□□□□ -0.16
NUP50-217ENST00000491860 KIAA1107Q9UPP5 1409 aa14.02□□□□□ -0.16
NUP50-217ENST00000491860 CCNB3Q8WWL7 1395 aa14.02□□□□□ -0.17
NUP50-217ENST00000491860 EHBP1L1Q8N3D4 1523 aa14.01□□□□□ -0.17
NUP50-217ENST00000491860 GPATCH8Q9UKJ3 1502 aaKnown RBP14.01□□□□□ -0.17
NUP50-217ENST00000491860 CEP162Q5TB80 1403 aa14.01□□□□□ -0.17
NUP50-217ENST00000491860 TRAPPC8Q9Y2L5 1435 aa14.01□□□□□ -0.17
NUP50-217ENST00000491860 ABCA6Q8N139 1617 aa14.01□□□□□ -0.17
NUP50-217ENST00000491860 LTBP4Q8N2S1 1624 aa14.01□□□□□ -0.17
NUP50-217ENST00000491860 SPATA31D1Q6ZQQ2 1576 aa14□□□□□ -0.17
NUP50-217ENST00000491860 ESF1Q9H501 851 aaKnown RBP14□□□□□ -0.17
NUP50-217ENST00000491860 CFDP1Q9UEE9 299 aaPredicted RBP14□□□□□ -0.17
NUP50-217ENST00000491860 ZNF777Q9ULD5 760 aaPredicted RBP13.99□□□□□ -0.17
NUP50-217ENST00000491860 SAMD9LQ8IVG5 1584 aa13.99□□□□□ -0.17
NUP50-217ENST00000491860 KIDINS220Q9ULH0 1771 aa13.99□□□□□ -0.17
NUP50-217ENST00000491860 SYCP2Q9BX26 1530 aa13.98□□□□□ -0.17
NUP50-217ENST00000491860 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
NUP50-217ENST00000491860 SPAG9O60271 1321 aaKnown RBP13.97□□□□□ -0.17
NUP50-217ENST00000491860 NCOA1Q15788 1441 aa13.96□□□□□ -0.18
NUP50-217ENST00000491860 MROH2AA6NES4 1674 aa13.95□□□□□ -0.18
NUP50-217ENST00000491860 NPATQ14207 1427 aa13.94□□□□□ -0.18
NUP50-217ENST00000491860 ATP7AQ04656 1500 aa13.94□□□□□ -0.18
NUP50-217ENST00000491860 SUPT6HQ7KZ85 1726 aaKnown RBP13.93□□□□□ -0.18
NUP50-217ENST00000491860 TIAM1Q13009 1591 aa13.93□□□□□ -0.18
NUP50-217ENST00000491860 HNRNPMP52272 730 aaKnown RBP eCLIP13.93□□□□□ -0.18
NUP50-217ENST00000491860 INO80Q9ULG1 1556 aaPredicted RBP13.92□□□□□ -0.18
NUP50-217ENST00000491860 RSPH4AQ5TD94 716 aa13.92□□□□□ -0.18
NUP50-217ENST00000491860 PPP6R1Q9UPN7 881 aa13.91□□□□□ -0.18
NUP50-217ENST00000491860 ADGBQ8N7X0 1667 aa13.91□□□□□ -0.18
NUP50-217ENST00000491860 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.18
NUP50-217ENST00000491860 A2MP01023 1474 aa13.9□□□□□ -0.18
NUP50-217ENST00000491860 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.19
NUP50-217ENST00000491860 PLXNC1O60486 1568 aa13.89□□□□□ -0.19
NUP50-217ENST00000491860 CAMSAP1Q5T5Y3 1602 aa13.89□□□□□ -0.19
NUP50-217ENST00000491860 ZNF142P52746 1687 aaPredicted RBP13.88□□□□□ -0.19
NUP50-217ENST00000491860 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
NUP50-217ENST00000491860 MAP3K1Q13233 1512 aa13.87□□□□□ -0.19
NUP50-217ENST00000491860 PLA2R1Q13018 1463 aa13.87□□□□□ -0.19
NUP50-217ENST00000491860 MBD5Q9P267 1494 aa13.87□□□□□ -0.19
NUP50-217ENST00000491860 CCDC141Q6ZP82 1450 aa13.86□□□□□ -0.19
NUP50-217ENST00000491860 ZMYM3Q14202 1370 aa13.84□□□□□ -0.19
NUP50-217ENST00000491860 FAM135AQ9P2D6 1515 aa13.84□□□□□ -0.19
NUP50-217ENST00000491860 MYO3AQ8NEV4 1616 aa13.83□□□□□ -0.2
NUP50-217ENST00000491860 CAMSAP2Q08AD1 1489 aa13.83□□□□□ -0.2
NUP50-217ENST00000491860 TCOF1Q13428 1488 aaKnown RBP13.83□□□□□ -0.2
NUP50-217ENST00000491860 LRRC9Q6ZRR7 1453 aa13.83□□□□□ -0.2
NUP50-217ENST00000491860 ARHGEF5Q12774 1597 aa13.83□□□□□ -0.2
NUP50-217ENST00000491860 DHX29Q7Z478 1369 aaKnown RBP13.83□□□□□ -0.2
NUP50-217ENST00000491860 TSPY4P0CV99 314 aa13.82□□□□□ -0.2
NUP50-217ENST00000491860 TSPY10P0CW01 314 aa13.82□□□□□ -0.2
NUP50-217ENST00000491860 PKD2Q13563 968 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms