RNA–Protein interactions for RNA: ENST00000491645.1

STX1A-211, Transcript of syntaxin 1A, humanhuman

TSL 2

Gene STX1A, Length 650 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-211ENST00000491645 MYO5CQ9NQX4 1742 aa30.4■■■□□ 2.46
STX1A-211ENST00000491645 ARHGAP5Q13017 1502 aa30.36■■■□□ 2.45
STX1A-211ENST00000491645 ARID4BQ4LE39 1312 aaPredicted RBP30.35■■■□□ 2.45
STX1A-211ENST00000491645 ZFYVE16Q7Z3T8 1539 aa30.34■■■□□ 2.45
STX1A-211ENST00000491645 YEATS2Q9ULM3 1422 aa30.31■■■□□ 2.44
STX1A-211ENST00000491645 CEP162Q5TB80 1403 aa30.3■■■□□ 2.44
STX1A-211ENST00000491645 ADAMTSL3P82987 1691 aa30.3■■■□□ 2.44
STX1A-211ENST00000491645 ZNF518AQ6AHZ1 1483 aa30.28■■■□□ 2.44
STX1A-211ENST00000491645 BCORL1Q5H9F3 1711 aa30.26■■■□□ 2.43
STX1A-211ENST00000491645 PTPRMP28827 1452 aa30.25■■■□□ 2.43
STX1A-211ENST00000491645 PREX2Q70Z35 1606 aa30.24■■■□□ 2.43
STX1A-211ENST00000491645 KDM5CP41229 1560 aa30.2■■■□□ 2.43
STX1A-211ENST00000491645 ATP10AO60312 1499 aa30.19■■■□□ 2.42
STX1A-211ENST00000491645 CDC42BPBQ9Y5S2 1711 aa30.19■■■□□ 2.42
STX1A-211ENST00000491645 AFAP1Q8N556 730 aa30.19■■■□□ 2.42
STX1A-211ENST00000491645 HECW2Q9P2P5 1572 aa30.19■■■□□ 2.42
STX1A-211ENST00000491645 C9orf84Q5VXU9 1444 aa30.18■■■□□ 2.42
STX1A-211ENST00000491645 MADDQ8WXG6 1647 aa30.17■■■□□ 2.42
STX1A-211ENST00000491645 ABCC1P33527 1531 aa30.17■■■□□ 2.42
STX1A-211ENST00000491645 MTUS2Q5JR59 1369 aa30.16■■■□□ 2.42
STX1A-211ENST00000491645 GPATCH8Q9UKJ3 1502 aaKnown RBP30.15■■■□□ 2.42
STX1A-211ENST00000491645 MLH3Q9UHC1 1453 aa30.13■■■□□ 2.41
STX1A-211ENST00000491645 ARHGEF12Q9NZN5 1544 aa30.12■■■□□ 2.41
STX1A-211ENST00000491645 TRAPPC8Q9Y2L5 1435 aa30.12■■■□□ 2.41
STX1A-211ENST00000491645 CDC42BPAQ5VT25 1732 aa30.1■■■□□ 2.41
STX1A-211ENST00000491645 CCNB3Q8WWL7 1395 aa30.09■■■□□ 2.41
STX1A-211ENST00000491645 SIGLEC1Q9BZZ2 1709 aa30.09■■■□□ 2.41
STX1A-211ENST00000491645 MYT1LQ9UL68 1186 aa30.09■■■□□ 2.41
STX1A-211ENST00000491645 LOC105371045A0A1W2PR82 267 aa30.08■■■□□ 2.41
STX1A-211ENST00000491645 EHBP1L1Q8N3D4 1523 aa30.07■■■□□ 2.4
STX1A-211ENST00000491645 CFDP1Q9UEE9 299 aaPredicted RBP30.06■■■□□ 2.4
STX1A-211ENST00000491645 ZNF777Q9ULD5 760 aaPredicted RBP30.06■■■□□ 2.4
STX1A-211ENST00000491645 ITSN2Q9NZM3 1697 aa30.05■■■□□ 2.4
STX1A-211ENST00000491645 MLECQ14165 292 aa30.05■■■□□ 2.4
STX1A-211ENST00000491645 REREQ9P2R6 1566 aa30.04■■■□□ 2.4
STX1A-211ENST00000491645 DIP2CQ9Y2E4 1556 aa30.04■■■□□ 2.4
STX1A-211ENST00000491645 PLEKHH2Q8IVE3 1493 aa30.04■■■□□ 2.4
STX1A-211ENST00000491645 KIAA1107Q9UPP5 1409 aa30.04■■■□□ 2.4
STX1A-211ENST00000491645 SAMD9LQ8IVG5 1584 aa30.03■■■□□ 2.4
STX1A-211ENST00000491645 RIMS1Q86UR5 1692 aaKnown RBP30.02■■■□□ 2.4
STX1A-211ENST00000491645 VPS8Q8N3P4 1428 aa30■■■□□ 2.39
STX1A-211ENST00000491645 SYCP2Q9BX26 1530 aa29.99■■■□□ 2.39
STX1A-211ENST00000491645 ABCA6Q8N139 1617 aa29.97■■■□□ 2.39
STX1A-211ENST00000491645 HNRNPMP52272 730 aaKnown RBP eCLIP29.95■■■□□ 2.39
STX1A-211ENST00000491645 AGLP35573 1532 aa29.95■■■□□ 2.38
STX1A-211ENST00000491645 TIAM1Q13009 1591 aa29.94■■■□□ 2.38
STX1A-211ENST00000491645 SPAG9O60271 1321 aaKnown RBP29.94■■■□□ 2.38
STX1A-211ENST00000491645 FER1L4A9Z1Z3 1794 aa29.91■■■□□ 2.38
STX1A-211ENST00000491645 KIDINS220Q9ULH0 1771 aa29.91■■■□□ 2.38
STX1A-211ENST00000491645 LMTK3Q96Q04 1460 aa29.91■■■□□ 2.38
STX1A-211ENST00000491645 NCOA2Q15596 1464 aa29.88■■■□□ 2.37
STX1A-211ENST00000491645 PLPPR3Q6T4P5 718 aa29.86■■■□□ 2.37
STX1A-211ENST00000491645 ATP7AQ04656 1500 aa29.85■■■□□ 2.37
STX1A-211ENST00000491645 ZNF644Q9H582 1327 aaPredicted RBP29.84■■■□□ 2.37
STX1A-211ENST00000491645 SUPT6HQ7KZ85 1726 aaKnown RBP29.83■■■□□ 2.37
STX1A-211ENST00000491645 MBD5Q9P267 1494 aa29.83■■■□□ 2.37
STX1A-211ENST00000491645 INO80Q9ULG1 1556 aaPredicted RBP29.82■■■□□ 2.36
STX1A-211ENST00000491645 MAP3K1Q13233 1512 aa29.82■■■□□ 2.36
STX1A-211ENST00000491645 LRRC9Q6ZRR7 1453 aa29.82■■■□□ 2.36
STX1A-211ENST00000491645 ESF1Q9H501 851 aaKnown RBP29.8■■■□□ 2.36
STX1A-211ENST00000491645 CEBPAP49715 358 aaPredicted RBP29.76■■■□□ 2.35
STX1A-211ENST00000491645 RTEL1-TNFRSF6BF6WH68 1400 aa29.76■■■□□ 2.35
STX1A-211ENST00000491645 CNTLNQ9NXG0 1405 aa29.76■■■□□ 2.35
STX1A-211ENST00000491645 A2MP01023 1474 aa29.75■■■□□ 2.35
STX1A-211ENST00000491645 RSPH4AQ5TD94 716 aa29.75■■■□□ 2.35
STX1A-211ENST00000491645 CAMSAP2Q08AD1 1489 aa29.74■■■□□ 2.35
STX1A-211ENST00000491645 PLXNC1O60486 1568 aa29.73■■■□□ 2.35
STX1A-211ENST00000491645 CCDC141Q6ZP82 1450 aa29.72■■■□□ 2.35
STX1A-211ENST00000491645 HSPA2P54652 639 aa29.71■■■□□ 2.35
STX1A-211ENST00000491645 KANK4Q5T7N3 995 aaPredicted RBP29.7■■■□□ 2.35
STX1A-211ENST00000491645 UHRF1BP1Q6BDS2 1440 aa29.65■■■□□ 2.34
STX1A-211ENST00000491645 PREX1Q8TCU6 1659 aa29.65■■■□□ 2.34
STX1A-211ENST00000491645 ADGBQ8N7X0 1667 aa29.63■■■□□ 2.33
STX1A-211ENST00000491645 APLP2Q06481 763 aa29.63■■■□□ 2.33
STX1A-211ENST00000491645 PPP6R1Q9UPN7 881 aa29.63■■■□□ 2.33
STX1A-211ENST00000491645 ARHGEF5Q12774 1597 aa29.63■■■□□ 2.33
STX1A-211ENST00000491645 DHX29Q7Z478 1369 aaKnown RBP29.63■■■□□ 2.33
STX1A-211ENST00000491645 MIA2Q96PC5 1412 aa29.62■■■□□ 2.33
STX1A-211ENST00000491645 C3P01024 1663 aa29.61■■■□□ 2.33
STX1A-211ENST00000491645 MYOM3Q5VTT5 1437 aa29.61■■■□□ 2.33
STX1A-211ENST00000491645 ILDR1Q86SU0 546 aaPredicted RBP29.6■■■□□ 2.33
STX1A-211ENST00000491645 TSPY4P0CV99 314 aa29.59■■■□□ 2.33
STX1A-211ENST00000491645 TSPY10P0CW01 314 aa29.59■■■□□ 2.33
STX1A-211ENST00000491645 ZMYM3Q14202 1370 aa29.59■■■□□ 2.33
STX1A-211ENST00000491645 NPATQ14207 1427 aa29.58■■■□□ 2.33
STX1A-211ENST00000491645 GGT6Q6P531 493 aa29.58■■■□□ 2.33
STX1A-211ENST00000491645 MROH2AA6NES4 1674 aa29.57■■■□□ 2.32
STX1A-211ENST00000491645 SETD1BQ9UPS6 1966 aaKnown RBP29.52■■■□□ 2.32
STX1A-211ENST00000491645 KIF3BO15066 747 aa29.48■■■□□ 2.31
STX1A-211ENST00000491645 MAST1Q9Y2H9 1570 aa29.47■■■□□ 2.31
STX1A-211ENST00000491645 CLTCQ00610 1675 aaKnown RBP29.47■■■□□ 2.31
STX1A-211ENST00000491645 FAM135AQ9P2D6 1515 aa29.46■■■□□ 2.31
STX1A-211ENST00000491645 DMRT2Q9Y5R5 561 aa29.46■■■□□ 2.31
STX1A-211ENST00000491645 PTPRKQ15262 1439 aa29.45■■■□□ 2.3
STX1A-211ENST00000491645 KDM5DQ9BY66 1539 aa29.4■■■□□ 2.3
STX1A-211ENST00000491645 FBXO41Q8TF61 875 aa29.39■■■□□ 2.3
STX1A-211ENST00000491645 FGD6Q6ZV73 1430 aa29.37■■■□□ 2.29
STX1A-211ENST00000491645 WASHC2CQ9Y4E1 1318 aa29.37■■■□□ 2.29
STX1A-211ENST00000491645 SHANK2Q9UPX8 1470 aa29.36■■■□□ 2.29
STX1A-211ENST00000491645 NCOA1Q15788 1441 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms