RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 CDK11AQ9UQ88 783 aaPredicted RBP14.04□□□□□ -0.16
APOBEC3F-204ENST00000491387 LRRIQ1Q96JM4 1722 aa14.04□□□□□ -0.16
APOBEC3F-204ENST00000491387 EFCAB2Q5VUJ9 269 aa14.03□□□□□ -0.16
APOBEC3F-204ENST00000491387 ATP10AO60312 1499 aa14.02□□□□□ -0.16
APOBEC3F-204ENST00000491387 UBTFP17480 764 aaKnown RBP14.02□□□□□ -0.17
APOBEC3F-204ENST00000491387 TROQ12816 1431 aaPredicted RBP14.01□□□□□ -0.17
APOBEC3F-204ENST00000491387 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
APOBEC3F-204ENST00000491387 MYO5CQ9NQX4 1742 aa14.01□□□□□ -0.17
APOBEC3F-204ENST00000491387 ARHGEF12Q9NZN5 1544 aa14□□□□□ -0.17
APOBEC3F-204ENST00000491387 CHIC1Q5VXU3 224 aa14□□□□□ -0.17
APOBEC3F-204ENST00000491387 C9orf84Q5VXU9 1444 aa13.99□□□□□ -0.17
APOBEC3F-204ENST00000491387 KDM5CP41229 1560 aa13.98□□□□□ -0.17
APOBEC3F-204ENST00000491387 ZNF518AQ6AHZ1 1483 aa13.98□□□□□ -0.17
APOBEC3F-204ENST00000491387 KIF14Q15058 1648 aa13.97□□□□□ -0.17
APOBEC3F-204ENST00000491387 FER1L4A9Z1Z3 1794 aa13.97□□□□□ -0.17
APOBEC3F-204ENST00000491387 CLIP1P30622 1438 aa13.96□□□□□ -0.18
APOBEC3F-204ENST00000491387 HSPA2P54652 639 aa13.95□□□□□ -0.18
APOBEC3F-204ENST00000491387 REREQ9P2R6 1566 aa13.95□□□□□ -0.18
APOBEC3F-204ENST00000491387 ATP1B4Q9UN42 357 aaPredicted RBP13.94□□□□□ -0.18
APOBEC3F-204ENST00000491387 MLH3Q9UHC1 1453 aa13.93□□□□□ -0.18
APOBEC3F-204ENST00000491387 SETD1BQ9UPS6 1966 aaKnown RBP13.93□□□□□ -0.18
APOBEC3F-204ENST00000491387 CASKIN1Q8WXD9 1431 aa13.93□□□□□ -0.18
APOBEC3F-204ENST00000491387 MLECQ14165 292 aa13.93□□□□□ -0.18
APOBEC3F-204ENST00000491387 AFAP1Q8N556 730 aa13.93□□□□□ -0.18
APOBEC3F-204ENST00000491387 ARHGAP5Q13017 1502 aa13.93□□□□□ -0.18
APOBEC3F-204ENST00000491387 CDC42BPBQ9Y5S2 1711 aa13.92□□□□□ -0.18
APOBEC3F-204ENST00000491387 CCDC18Q5T9S5 1454 aa13.91□□□□□ -0.18
APOBEC3F-204ENST00000491387 AGLP35573 1532 aa13.9□□□□□ -0.18
APOBEC3F-204ENST00000491387 DIP2CQ9Y2E4 1556 aa13.9□□□□□ -0.18
APOBEC3F-204ENST00000491387 PREX1Q8TCU6 1659 aa13.9□□□□□ -0.18
APOBEC3F-204ENST00000491387 PREX2Q70Z35 1606 aa13.89□□□□□ -0.19
APOBEC3F-204ENST00000491387 ABCC1P33527 1531 aa13.88□□□□□ -0.19
APOBEC3F-204ENST00000491387 PLPPR3Q6T4P5 718 aa13.87□□□□□ -0.19
APOBEC3F-204ENST00000491387 CERKQ8TCT0 537 aa13.87□□□□□ -0.19
APOBEC3F-204ENST00000491387 TRAPPC8Q9Y2L5 1435 aa13.87□□□□□ -0.19
APOBEC3F-204ENST00000491387 ABCA6Q8N139 1617 aa13.86□□□□□ -0.19
APOBEC3F-204ENST00000491387 CEBPAP49715 358 aaPredicted RBP13.86□□□□□ -0.19
APOBEC3F-204ENST00000491387 FYCO1Q9BQS8 1478 aa13.86□□□□□ -0.19
APOBEC3F-204ENST00000491387 DMRT2Q9Y5R5 561 aa13.85□□□□□ -0.19
APOBEC3F-204ENST00000491387 ITSN2Q9NZM3 1697 aa13.85□□□□□ -0.19
APOBEC3F-204ENST00000491387 STRCQ7RTU9 1775 aa13.83□□□□□ -0.19
APOBEC3F-204ENST00000491387 KIDINS220Q9ULH0 1771 aa13.83□□□□□ -0.19
APOBEC3F-204ENST00000491387 UHRF1BP1Q6BDS2 1440 aa13.83□□□□□ -0.2
APOBEC3F-204ENST00000491387 CDC42BPAQ5VT25 1732 aa13.83□□□□□ -0.2
APOBEC3F-204ENST00000491387 CNTLNQ9NXG0 1405 aa13.82□□□□□ -0.2
APOBEC3F-204ENST00000491387 C3P01024 1663 aa13.81□□□□□ -0.2
APOBEC3F-204ENST00000491387 PTPRTO14522 1441 aa13.81□□□□□ -0.2
APOBEC3F-204ENST00000491387 GPATCH8Q9UKJ3 1502 aaKnown RBP13.8□□□□□ -0.2
APOBEC3F-204ENST00000491387 MYT1LQ9UL68 1186 aa13.8□□□□□ -0.2
APOBEC3F-204ENST00000491387 KIAA1107Q9UPP5 1409 aa13.8□□□□□ -0.2
APOBEC3F-204ENST00000491387 SAMD9LQ8IVG5 1584 aa13.79□□□□□ -0.2
APOBEC3F-204ENST00000491387 NPATQ14207 1427 aa13.77□□□□□ -0.21
APOBEC3F-204ENST00000491387 PLEKHH2Q8IVE3 1493 aa13.77□□□□□ -0.21
APOBEC3F-204ENST00000491387 ESF1Q9H501 851 aaKnown RBP13.77□□□□□ -0.21
APOBEC3F-204ENST00000491387 MROH2AA6NES4 1674 aa13.75□□□□□ -0.21
APOBEC3F-204ENST00000491387 SYCP2Q9BX26 1530 aa13.75□□□□□ -0.21
APOBEC3F-204ENST00000491387 SPAG9O60271 1321 aaKnown RBP13.75□□□□□ -0.21
APOBEC3F-204ENST00000491387 NCOA1Q15788 1441 aa13.74□□□□□ -0.21
APOBEC3F-204ENST00000491387 PLXNC1O60486 1568 aa13.74□□□□□ -0.21
APOBEC3F-204ENST00000491387 CFDP1Q9UEE9 299 aaPredicted RBP13.73□□□□□ -0.21
APOBEC3F-204ENST00000491387 INO80Q9ULG1 1556 aaPredicted RBP13.73□□□□□ -0.21
APOBEC3F-204ENST00000491387 ATP7AQ04656 1500 aa13.73□□□□□ -0.21
APOBEC3F-204ENST00000491387 ZMYM3Q14202 1370 aa13.72□□□□□ -0.21
APOBEC3F-204ENST00000491387 HNRNPMP52272 730 aaKnown RBP eCLIP13.72□□□□□ -0.21
APOBEC3F-204ENST00000491387 ZNF777Q9ULD5 760 aaPredicted RBP13.72□□□□□ -0.21
APOBEC3F-204ENST00000491387 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
APOBEC3F-204ENST00000491387 IQSEC2Q5JU85 1478 aa13.72□□□□□ -0.21
APOBEC3F-204ENST00000491387 CCNB3Q8WWL7 1395 aa13.71□□□□□ -0.21
APOBEC3F-204ENST00000491387 A2MP01023 1474 aa13.71□□□□□ -0.21
APOBEC3F-204ENST00000491387 LTBP4Q8N2S1 1624 aa13.71□□□□□ -0.22
APOBEC3F-204ENST00000491387 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
APOBEC3F-204ENST00000491387 MBD5Q9P267 1494 aa13.68□□□□□ -0.22
APOBEC3F-204ENST00000491387 SUPT6HQ7KZ85 1726 aaKnown RBP13.68□□□□□ -0.22
APOBEC3F-204ENST00000491387 PLA2R1Q13018 1463 aa13.67□□□□□ -0.22
APOBEC3F-204ENST00000491387 RTEL1-TNFRSF6BF6WH68 1400 aa13.67□□□□□ -0.22
APOBEC3F-204ENST00000491387 PTPRKQ15262 1439 aa13.67□□□□□ -0.22
APOBEC3F-204ENST00000491387 CAMSAP1Q5T5Y3 1602 aa13.67□□□□□ -0.22
APOBEC3F-204ENST00000491387 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
APOBEC3F-204ENST00000491387 ADGBQ8N7X0 1667 aa13.66□□□□□ -0.22
APOBEC3F-204ENST00000491387 CEP162Q5TB80 1403 aa13.66□□□□□ -0.22
APOBEC3F-204ENST00000491387 TIAM1Q13009 1591 aa13.66□□□□□ -0.22
APOBEC3F-204ENST00000491387 EHBP1L1Q8N3D4 1523 aa13.65□□□□□ -0.22
APOBEC3F-204ENST00000491387 CLTCQ00610 1675 aaKnown RBP13.65□□□□□ -0.22
APOBEC3F-204ENST00000491387 TCOF1Q13428 1488 aaKnown RBP13.64□□□□□ -0.23
APOBEC3F-204ENST00000491387 PKD2Q13563 968 aa13.64□□□□□ -0.23
APOBEC3F-204ENST00000491387 ZNF644Q9H582 1327 aaPredicted RBP13.64□□□□□ -0.23
APOBEC3F-204ENST00000491387 DHX29Q7Z478 1369 aaKnown RBP13.63□□□□□ -0.23
APOBEC3F-204ENST00000491387 MYO3AQ8NEV4 1616 aa13.63□□□□□ -0.23
APOBEC3F-204ENST00000491387 RSPH4AQ5TD94 716 aa13.62□□□□□ -0.23
APOBEC3F-204ENST00000491387 GGT6Q6P531 493 aa13.62□□□□□ -0.23
APOBEC3F-204ENST00000491387 FAM135AQ9P2D6 1515 aa13.62□□□□□ -0.23
APOBEC3F-204ENST00000491387 CEP170BQ9Y4F5 1589 aaPredicted RBP13.62□□□□□ -0.23
APOBEC3F-204ENST00000491387 NCKAP5LQ9HCH0 1330 aa13.61□□□□□ -0.23
APOBEC3F-204ENST00000491387 A2ML1A8K2U0 1454 aa13.59□□□□□ -0.23
APOBEC3F-204ENST00000491387 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.24
APOBEC3F-204ENST00000491387 NCOA2Q15596 1464 aa13.57□□□□□ -0.24
APOBEC3F-204ENST00000491387 ZNF335Q9H4Z2 1342 aaPredicted RBP13.57□□□□□ -0.24
APOBEC3F-204ENST00000491387 DISP3Q9P2K9 1392 aa13.57□□□□□ -0.24
APOBEC3F-204ENST00000491387 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
APOBEC3F-204ENST00000491387 PZPP20742 1482 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms