RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 GOLGA3Q08378 1498 aa14.26□□□□□ -0.13
CMSS1-206ENST00000491299 VASPP50552 380 aaPredicted RBP14.26□□□□□ -0.13
CMSS1-206ENST00000491299 MAPKBP1O60336 1514 aa14.25□□□□□ -0.13
CMSS1-206ENST00000491299 ZRANB1Q9UGI0 708 aa14.24□□□□□ -0.13
CMSS1-206ENST00000491299 KIF13AQ9H1H9 1805 aa14.24□□□□□ -0.13
CMSS1-206ENST00000491299 PAK3O75914 559 aaPredicted RBP14.22□□□□□ -0.13
CMSS1-206ENST00000491299 FAM9AQ8IZU1 332 aaPredicted RBP14.22□□□□□ -0.13
CMSS1-206ENST00000491299 ZBTB47Q9UFB7 747 aaPredicted RBP14.22□□□□□ -0.13
CMSS1-206ENST00000491299 UACAQ9BZF9 1416 aa14.21□□□□□ -0.13
CMSS1-206ENST00000491299 ABCC2Q92887 1545 aa14.2□□□□□ -0.14
CMSS1-206ENST00000491299 UHRF1BP1LA0JNW5 1464 aa14.19□□□□□ -0.14
CMSS1-206ENST00000491299 ABCC10Q5T3U5 1492 aa14.18□□□□□ -0.14
CMSS1-206ENST00000491299 DIP2BQ9P265 1576 aa14.17□□□□□ -0.14
CMSS1-206ENST00000491299 KIF21BO75037 1637 aa14.17□□□□□ -0.14
CMSS1-206ENST00000491299 FAM69CQ0P6D2 419 aa14.17□□□□□ -0.14
CMSS1-206ENST00000491299 PLB1Q6P1J6 1458 aa14.14□□□□□ -0.15
CMSS1-206ENST00000491299 TSPYL2Q9H2G4 693 aaPredicted RBP14.14□□□□□ -0.15
CMSS1-206ENST00000491299 ZCCHC11Q5TAX3 1644 aaKnown RBP14.14□□□□□ -0.15
CMSS1-206ENST00000491299 ZNF579Q8NAF0 562 aaKnown RBP14.13□□□□□ -0.15
CMSS1-206ENST00000491299 TSPOAP1O95153 1857 aa14.12□□□□□ -0.15
CMSS1-206ENST00000491299 KDM5BQ9UGL1 1544 aa14.12□□□□□ -0.15
CMSS1-206ENST00000491299 KLHL34Q8N239 644 aa14.12□□□□□ -0.15
CMSS1-206ENST00000491299 ASXL2Q76L83 1435 aa14.12□□□□□ -0.15
CMSS1-206ENST00000491299 GABBR2O75899 941 aa14.11□□□□□ -0.15
CMSS1-206ENST00000491299 SAMD9Q5K651 1589 aa14.11□□□□□ -0.15
CMSS1-206ENST00000491299 RASEFQ8IZ41 740 aa14.11□□□□□ -0.15
CMSS1-206ENST00000491299 ABCA8O94911 1581 aa14.09□□□□□ -0.15
CMSS1-206ENST00000491299 RANGAP1P46060 587 aaPredicted RBP14.09□□□□□ -0.15
CMSS1-206ENST00000491299 P3H3Q8IVL6 736 aa14.09□□□□□ -0.15
CMSS1-206ENST00000491299 PHF12Q96QT6 1004 aa14.09□□□□□ -0.15
CMSS1-206ENST00000491299 UBTFP17480 764 aaKnown RBP14.07□□□□□ -0.16
CMSS1-206ENST00000491299 EFCAB5A4FU69 1503 aa14.06□□□□□ -0.16
CMSS1-206ENST00000491299 GLI2P10070 1586 aa14.06□□□□□ -0.16
CMSS1-206ENST00000491299 NUBP1P53384 320 aa14.06□□□□□ -0.16
CMSS1-206ENST00000491299 WDR7Q9Y4E6 1490 aa14.05□□□□□ -0.16
CMSS1-206ENST00000491299 EPRSP07814 1512 aaKnown RBP14.04□□□□□ -0.16
CMSS1-206ENST00000491299 RAPGEF6Q8TEU7 1601 aa14.04□□□□□ -0.16
CMSS1-206ENST00000491299 IFNLR1Q8IU57 520 aaPredicted RBP14.03□□□□□ -0.16
CMSS1-206ENST00000491299 KDM6BO15054 1643 aa14.03□□□□□ -0.16
CMSS1-206ENST00000491299 FHOD3Q2V2M9 1422 aa14.01□□□□□ -0.17
CMSS1-206ENST00000491299 FAM212AQ96EL1 285 aa14.01□□□□□ -0.17
CMSS1-206ENST00000491299 CCDC61Q9Y6R9 512 aa14.01□□□□□ -0.17
CMSS1-206ENST00000491299 MAP3K4Q9Y6R4 1608 aa14.01□□□□□ -0.17
CMSS1-206ENST00000491299 TEX14Q8IWB6 1497 aa13.99□□□□□ -0.17
CMSS1-206ENST00000491299 ARID3CA6NKF2 412 aa13.99□□□□□ -0.17
CMSS1-206ENST00000491299 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
CMSS1-206ENST00000491299 CLCN6P51797 869 aa13.98□□□□□ -0.17
CMSS1-206ENST00000491299 PPRC1Q5VV67 1664 aaKnown RBP13.98□□□□□ -0.17
CMSS1-206ENST00000491299 KCNH8Q96L42 1107 aa13.97□□□□□ -0.17
CMSS1-206ENST00000491299 ATP10BO94823 1461 aa13.96□□□□□ -0.17
CMSS1-206ENST00000491299 GALR2O43603 387 aaPredicted RBP13.96□□□□□ -0.17
CMSS1-206ENST00000491299 NUP153P49790 1475 aaKnown RBP13.93□□□□□ -0.18
CMSS1-206ENST00000491299 FMN1Q68DA7 1419 aa13.93□□□□□ -0.18
CMSS1-206ENST00000491299 CD109Q6YHK3 1445 aa13.93□□□□□ -0.18
CMSS1-206ENST00000491299 DCAF8Q5TAQ9 597 aa13.93□□□□□ -0.18
CMSS1-206ENST00000491299 SPOCK2Q92563 424 aa13.92□□□□□ -0.18
CMSS1-206ENST00000491299 HECW1Q76N89 1606 aa13.9□□□□□ -0.18
CMSS1-206ENST00000491299 MS4A3Q96HJ5 214 aa13.9□□□□□ -0.18
CMSS1-206ENST00000491299 ARHGAP35Q9NRY4 1499 aa13.9□□□□□ -0.18
CMSS1-206ENST00000491299 MAGI3Q5TCQ9 1506 aa13.9□□□□□ -0.19
CMSS1-206ENST00000491299 PLEKHD1A6NEE1 506 aa13.89□□□□□ -0.19
CMSS1-206ENST00000491299 ABCA9Q8IUA7 1624 aa13.89□□□□□ -0.19
CMSS1-206ENST00000491299 KIF12Q96FN5 646 aa13.88□□□□□ -0.19
CMSS1-206ENST00000491299 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
CMSS1-206ENST00000491299 DCBLD2Q96PD2 775 aa13.86□□□□□ -0.19
CMSS1-206ENST00000491299 MAP3K13O43283 966 aa13.85□□□□□ -0.19
CMSS1-206ENST00000491299 CDK13Q14004 1512 aaKnown RBP13.84□□□□□ -0.19
CMSS1-206ENST00000491299 GSE1Q14687 1217 aa13.83□□□□□ -0.2
CMSS1-206ENST00000491299 CDK11AQ9UQ88 783 aaPredicted RBP13.83□□□□□ -0.2
CMSS1-206ENST00000491299 PYGBP11216 843 aa13.82□□□□□ -0.2
CMSS1-206ENST00000491299 PHLDB1Q86UU1 1377 aa13.82□□□□□ -0.2
CMSS1-206ENST00000491299 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
CMSS1-206ENST00000491299 CLIP1P30622 1438 aa13.81□□□□□ -0.2
CMSS1-206ENST00000491299 COL17A1Q9UMD9 1497 aaPredicted RBP13.8□□□□□ -0.2
CMSS1-206ENST00000491299 CFAP74Q9C0B2 1584 aa13.8□□□□□ -0.2
CMSS1-206ENST00000491299 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
CMSS1-206ENST00000491299 PCDHB13Q9Y5F0 798 aa13.8□□□□□ -0.2
CMSS1-206ENST00000491299 NEO1Q92859 1461 aa13.79□□□□□ -0.2
CMSS1-206ENST00000491299 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
CMSS1-206ENST00000491299 CCDC18Q5T9S5 1454 aa13.78□□□□□ -0.2
CMSS1-206ENST00000491299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.78□□□□□ -0.26e-6■■■■■ 38.2
CMSS1-206ENST00000491299 ARAP3Q8WWN8 1544 aa13.78□□□□□ -0.2
CMSS1-206ENST00000491299 KIF14Q15058 1648 aa13.77□□□□□ -0.21
CMSS1-206ENST00000491299 TTC37Q6PGP7 1564 aa13.77□□□□□ -0.21
CMSS1-206ENST00000491299 LRRIQ1Q96JM4 1722 aa13.76□□□□□ -0.21
CMSS1-206ENST00000491299 CASKIN1Q8WXD9 1431 aa13.76□□□□□ -0.21
CMSS1-206ENST00000491299 FYCO1Q9BQS8 1478 aa13.75□□□□□ -0.21
CMSS1-206ENST00000491299 MYO5CQ9NQX4 1742 aa13.75□□□□□ -0.21
CMSS1-206ENST00000491299 FANCAO15360 1455 aa13.74□□□□□ -0.21
CMSS1-206ENST00000491299 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
CMSS1-206ENST00000491299 TRPC6Q9Y210 931 aa13.73□□□□□ -0.21
CMSS1-206ENST00000491299 IFNL1Q8IU54 200 aa13.72□□□□□ -0.21
CMSS1-206ENST00000491299 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.21
CMSS1-206ENST00000491299 CEP162Q5TB80 1403 aa13.71□□□□□ -0.22
CMSS1-206ENST00000491299 AKNAQ7Z591 1439 aa13.71□□□□□ -0.22
CMSS1-206ENST00000491299 DENND4BO75064 1496 aaPredicted RBP13.69□□□□□ -0.22
CMSS1-206ENST00000491299 ADGRL1O94910 1474 aa13.69□□□□□ -0.22
CMSS1-206ENST00000491299 PLCH2O75038 1416 aa13.69□□□□□ -0.22
CMSS1-206ENST00000491299 RAPGEF3O95398 923 aa13.68□□□□□ -0.22
CMSS1-206ENST00000491299 RICTORQ6R327 1708 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms