RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 TTC37Q6PGP7 1564 aa16.78■□□□□ 0.28
VARS2-210ENST00000490699 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
VARS2-210ENST00000490699 MYOM3Q5VTT5 1437 aa16.76■□□□□ 0.27
VARS2-210ENST00000490699 CD109Q6YHK3 1445 aa16.76■□□□□ 0.27
VARS2-210ENST00000490699 ARHGAP5Q13017 1502 aa16.75■□□□□ 0.27
VARS2-210ENST00000490699 PREX2Q70Z35 1606 aa16.75■□□□□ 0.27
VARS2-210ENST00000490699 CFAP74Q9C0B2 1584 aa16.75■□□□□ 0.27
VARS2-210ENST00000490699 CDC42BPAQ5VT25 1732 aa16.74■□□□□ 0.27
VARS2-210ENST00000490699 CFDP1Q9UEE9 299 aaPredicted RBP16.74■□□□□ 0.27
VARS2-210ENST00000490699 MAP3K4Q9Y6R4 1608 aa16.74■□□□□ 0.27
VARS2-210ENST00000490699 KIF13AQ9H1H9 1805 aa16.73■□□□□ 0.27
VARS2-210ENST00000490699 ARAP3Q8WWN8 1544 aa16.73■□□□□ 0.27
VARS2-210ENST00000490699 TEX14Q8IWB6 1497 aa16.73■□□□□ 0.27
VARS2-210ENST00000490699 PLCH2O75038 1416 aa16.72■□□□□ 0.27
VARS2-210ENST00000490699 MIA2Q96PC5 1412 aa16.72■□□□□ 0.27
VARS2-210ENST00000490699 GPATCH8Q9UKJ3 1502 aaKnown RBP16.72■□□□□ 0.27
VARS2-210ENST00000490699 EFCAB2Q5VUJ9 269 aa16.71■□□□□ 0.27
VARS2-210ENST00000490699 PHLDB1Q86UU1 1377 aa16.71■□□□□ 0.27
VARS2-210ENST00000490699 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
VARS2-210ENST00000490699 FANCAO15360 1455 aa16.69■□□□□ 0.26
VARS2-210ENST00000490699 ZNF777Q9ULD5 760 aaPredicted RBP16.69■□□□□ 0.26
VARS2-210ENST00000490699 PLEKHH2Q8IVE3 1493 aa16.68■□□□□ 0.26
VARS2-210ENST00000490699 CDC42BPBQ9Y5S2 1711 aa16.68■□□□□ 0.26
VARS2-210ENST00000490699 TSPOAP1O95153 1857 aa16.68■□□□□ 0.26
VARS2-210ENST00000490699 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
VARS2-210ENST00000490699 FAM50AQ14320 339 aaKnown RBP16.66■□□□□ 0.26
VARS2-210ENST00000490699 NEO1Q92859 1461 aa16.66■□□□□ 0.26
VARS2-210ENST00000490699 RNF39Q9H2S5 420 aa16.65■□□□□ 0.26
VARS2-210ENST00000490699 CAMSAP2Q08AD1 1489 aa16.64■□□□□ 0.25
VARS2-210ENST00000490699 RRBP1Q9P2E9 1410 aaKnown RBP16.63■□□□□ 0.25
VARS2-210ENST00000490699 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
VARS2-210ENST00000490699 ADGRL1O94910 1474 aa16.61■□□□□ 0.25
VARS2-210ENST00000490699 TCOF1Q13428 1488 aaKnown RBP16.61■□□□□ 0.25
VARS2-210ENST00000490699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.61■□□□□ 0.25
VARS2-210ENST00000490699 AKNAQ7Z591 1439 aa16.61■□□□□ 0.25
VARS2-210ENST00000490699 SAMD9LQ8IVG5 1584 aa16.6■□□□□ 0.25
VARS2-210ENST00000490699 RSPH4AQ5TD94 716 aa16.59■□□□□ 0.25
VARS2-210ENST00000490699 KIAA1107Q9UPP5 1409 aa16.59■□□□□ 0.25
VARS2-210ENST00000490699 ABCC1P33527 1531 aa16.59■□□□□ 0.25
VARS2-210ENST00000490699 PPRC1Q5VV67 1664 aaKnown RBP16.59■□□□□ 0.25
VARS2-210ENST00000490699 TRIM26Q12899 539 aaPredicted RBP16.58■□□□□ 0.24
VARS2-210ENST00000490699 SYCP2Q9BX26 1530 aa16.57■□□□□ 0.24
VARS2-210ENST00000490699 SCAPERQ9BY12 1400 aa16.56■□□□□ 0.24
VARS2-210ENST00000490699 ARHGEF5Q12774 1597 aa16.55■□□□□ 0.24
VARS2-210ENST00000490699 DENND4BO75064 1496 aaPredicted RBP16.55■□□□□ 0.24
VARS2-210ENST00000490699 ZNF644Q9H582 1327 aaPredicted RBP16.55■□□□□ 0.24
VARS2-210ENST00000490699 TSPY4P0CV99 314 aa16.55■□□□□ 0.24
VARS2-210ENST00000490699 TSPY10P0CW01 314 aa16.55■□□□□ 0.24
VARS2-210ENST00000490699 CCDC141Q6ZP82 1450 aa16.54■□□□□ 0.24
VARS2-210ENST00000490699 DNMT1P26358 1616 aaKnown RBP16.54■□□□□ 0.24
VARS2-210ENST00000490699 ZNF518AQ6AHZ1 1483 aa16.54■□□□□ 0.24
VARS2-210ENST00000490699 ITGAEP38570 1179 aa16.53■□□□□ 0.24
VARS2-210ENST00000490699 HNRNPMP52272 730 aaKnown RBP eCLIP16.53■□□□□ 0.24
VARS2-210ENST00000490699 MYT1LQ9UL68 1186 aa16.53■□□□□ 0.24
VARS2-210ENST00000490699 DAPK1P53355 1430 aa16.51■□□□□ 0.23
VARS2-210ENST00000490699 POGZQ7Z3K3 1410 aa16.51■□□□□ 0.23
VARS2-210ENST00000490699 CROCC2H7BZ55 1655 aa16.5■□□□□ 0.23
VARS2-210ENST00000490699 SHANK2Q9UPX8 1470 aa16.49■□□□□ 0.23
VARS2-210ENST00000490699 KDM6BO15054 1643 aa16.49■□□□□ 0.23
VARS2-210ENST00000490699 MBD5Q9P267 1494 aa16.48■□□□□ 0.23
VARS2-210ENST00000490699 SPAG9O60271 1321 aaKnown RBP16.48■□□□□ 0.23
VARS2-210ENST00000490699 C9orf84Q5VXU9 1444 aa16.47■□□□□ 0.23
VARS2-210ENST00000490699 ADGBQ8N7X0 1667 aa16.46■□□□□ 0.23
VARS2-210ENST00000490699 ABCC5O15440 1437 aa16.46■□□□□ 0.23
VARS2-210ENST00000490699 TRAPPC8Q9Y2L5 1435 aa16.46■□□□□ 0.23
VARS2-210ENST00000490699 ARHGEF12Q9NZN5 1544 aa16.46■□□□□ 0.23
VARS2-210ENST00000490699 RICTORQ6R327 1708 aa16.46■□□□□ 0.23
VARS2-210ENST00000490699 ANKRD30AQ9BXX3 1397 aa16.45■□□□□ 0.22
VARS2-210ENST00000490699 HECW2Q9P2P5 1572 aa16.45■□□□□ 0.22
VARS2-210ENST00000490699 MAST1Q9Y2H9 1570 aa16.45■□□□□ 0.22
VARS2-210ENST00000490699 KDM5CP41229 1560 aa16.44■□□□□ 0.22
VARS2-210ENST00000490699 AFAP1Q8N556 730 aa16.44■□□□□ 0.22
VARS2-210ENST00000490699 RTEL1-TNFRSF6BF6WH68 1400 aa16.44■□□□□ 0.22
VARS2-210ENST00000490699 RAPGEF3O95398 923 aa16.43■□□□□ 0.22
VARS2-210ENST00000490699 ATP7AQ04656 1500 aa16.43■□□□□ 0.22
VARS2-210ENST00000490699 ZMYM4Q5VZL5 1548 aa16.43■□□□□ 0.22
VARS2-210ENST00000490699 MAGI2Q86UL8 1455 aa16.42■□□□□ 0.22
VARS2-210ENST00000490699 CHIC2Q9UKJ5 165 aa16.42■□□□□ 0.22
VARS2-210ENST00000490699 ROCK1Q13464 1354 aa16.41■□□□□ 0.22
VARS2-210ENST00000490699 INO80Q9ULG1 1556 aaPredicted RBP16.41■□□□□ 0.22
VARS2-210ENST00000490699 MLH3Q9UHC1 1453 aa16.41■□□□□ 0.22
VARS2-210ENST00000490699 ZFYVE16Q7Z3T8 1539 aa16.4■□□□□ 0.22
VARS2-210ENST00000490699 FRMPD1Q5SYB0 1578 aa16.4■□□□□ 0.22
VARS2-210ENST00000490699 ADGRL2O95490 1459 aa16.4■□□□□ 0.22
VARS2-210ENST00000490699 PLXNC1O60486 1568 aa16.39■□□□□ 0.21
VARS2-210ENST00000490699 PCGF6Q9BYE7 350 aa16.39■□□□□ 0.21
VARS2-210ENST00000490699 KIF15Q9NS87 1388 aa16.37■□□□□ 0.21
VARS2-210ENST00000490699 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
VARS2-210ENST00000490699 KIDINS220Q9ULH0 1771 aa16.36■□□□□ 0.21
VARS2-210ENST00000490699 NCOA1Q15788 1441 aa16.36■□□□□ 0.21
VARS2-210ENST00000490699 COL17A1Q9UMD9 1497 aaPredicted RBP16.35■□□□□ 0.21
VARS2-210ENST00000490699 RRP7BPQ9NSQ0 103 aa16.35■□□□□ 0.21
VARS2-210ENST00000490699 ACIN1Q9UKV3 1341 aaKnown RBP16.35■□□□□ 0.21
VARS2-210ENST00000490699 PTPRKQ15262 1439 aa16.35■□□□□ 0.21
VARS2-210ENST00000490699 DUOX2Q9NRD8 1548 aa16.35■□□□□ 0.21
VARS2-210ENST00000490699 GCC2Q8IWJ2 1684 aa16.34■□□□□ 0.21
VARS2-210ENST00000490699 HFM1A2PYH4 1435 aa16.34■□□□□ 0.21
VARS2-210ENST00000490699 ARHGEF40Q8TER5 1519 aa16.34■□□□□ 0.21
VARS2-210ENST00000490699 ABCA6Q8N139 1617 aa16.32■□□□□ 0.2
VARS2-210ENST00000490699 DIP2CQ9Y2E4 1556 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms