RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 ARHGAP5Q13017 1502 aa24.42■■□□□ 1.5
VPS26A-207ENST00000490696 ADGRL1O94910 1474 aa24.42■■□□□ 1.5
VPS26A-207ENST00000490696 CDC42BPBQ9Y5S2 1711 aa24.41■■□□□ 1.5
VPS26A-207ENST00000490696 PREX2Q70Z35 1606 aa24.41■■□□□ 1.5
VPS26A-207ENST00000490696 EHBP1L1Q8N3D4 1523 aa24.4■■□□□ 1.5
VPS26A-207ENST00000490696 TIAM1Q13009 1591 aa24.4■■□□□ 1.5
VPS26A-207ENST00000490696 RICTORQ6R327 1708 aa24.39■■□□□ 1.5
VPS26A-207ENST00000490696 SCAPERQ9BY12 1400 aa24.39■■□□□ 1.5
VPS26A-207ENST00000490696 CDC42BPAQ5VT25 1732 aa24.38■■□□□ 1.49
VPS26A-207ENST00000490696 GPATCH8Q9UKJ3 1502 aaKnown RBP24.37■■□□□ 1.49
VPS26A-207ENST00000490696 POGZQ7Z3K3 1410 aa24.35■■□□□ 1.49
VPS26A-207ENST00000490696 MAP3K1Q13233 1512 aa24.35■■□□□ 1.49
VPS26A-207ENST00000490696 ZMYM4Q5VZL5 1548 aa24.33■■□□□ 1.49
VPS26A-207ENST00000490696 CCNB3Q8WWL7 1395 aa24.32■■□□□ 1.48
VPS26A-207ENST00000490696 LRRC9Q6ZRR7 1453 aa24.31■■□□□ 1.48
VPS26A-207ENST00000490696 ABCC1P33527 1531 aa24.3■■□□□ 1.48
VPS26A-207ENST00000490696 ARHGEF12Q9NZN5 1544 aa24.28■■□□□ 1.48
VPS26A-207ENST00000490696 NCOA2Q15596 1464 aa24.27■■□□□ 1.48
VPS26A-207ENST00000490696 ARHGEF40Q8TER5 1519 aa24.27■■□□□ 1.48
VPS26A-207ENST00000490696 KANK4Q5T7N3 995 aaPredicted RBP24.27■■□□□ 1.48
VPS26A-207ENST00000490696 CFDP1Q9UEE9 299 aaPredicted RBP24.27■■□□□ 1.48
VPS26A-207ENST00000490696 SUPT6HQ7KZ85 1726 aaKnown RBP24.27■■□□□ 1.48
VPS26A-207ENST00000490696 ZNF518AQ6AHZ1 1483 aa24.26■■□□□ 1.47
VPS26A-207ENST00000490696 MAGI2Q86UL8 1455 aa24.26■■□□□ 1.47
VPS26A-207ENST00000490696 SAMD9LQ8IVG5 1584 aa24.25■■□□□ 1.47
VPS26A-207ENST00000490696 AFAP1Q8N556 730 aa24.25■■□□□ 1.47
VPS26A-207ENST00000490696 KDM5CP41229 1560 aa24.25■■□□□ 1.47
VPS26A-207ENST00000490696 ZNF777Q9ULD5 760 aaPredicted RBP24.24■■□□□ 1.47
VPS26A-207ENST00000490696 YEATS2Q9ULM3 1422 aa24.24■■□□□ 1.47
VPS26A-207ENST00000490696 ZFYVE16Q7Z3T8 1539 aa24.24■■□□□ 1.47
VPS26A-207ENST00000490696 TRAPPC8Q9Y2L5 1435 aa24.23■■□□□ 1.47
VPS26A-207ENST00000490696 ITSN2Q9NZM3 1697 aa24.23■■□□□ 1.47
VPS26A-207ENST00000490696 HECW2Q9P2P5 1572 aa24.22■■□□□ 1.47
VPS26A-207ENST00000490696 KIAA1107Q9UPP5 1409 aa24.2■■□□□ 1.46
VPS26A-207ENST00000490696 APLP2Q06481 763 aa24.2■■□□□ 1.46
VPS26A-207ENST00000490696 SYCP2Q9BX26 1530 aa24.19■■□□□ 1.46
VPS26A-207ENST00000490696 PLEKHH2Q8IVE3 1493 aa24.19■■□□□ 1.46
VPS26A-207ENST00000490696 ZNF644Q9H582 1327 aaPredicted RBP24.16■■□□□ 1.46
VPS26A-207ENST00000490696 MLH3Q9UHC1 1453 aa24.16■■□□□ 1.46
VPS26A-207ENST00000490696 HNRNPMP52272 730 aaKnown RBP eCLIP24.16■■□□□ 1.462e-7■■■■■ 29.2
VPS26A-207ENST00000490696 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
VPS26A-207ENST00000490696 ATP10AO60312 1499 aa24.13■■□□□ 1.45
VPS26A-207ENST00000490696 SIGLEC1Q9BZZ2 1709 aa24.11■■□□□ 1.45
VPS26A-207ENST00000490696 MBD5Q9P267 1494 aa24.11■■□□□ 1.45
VPS26A-207ENST00000490696 ARID4BQ4LE39 1312 aaPredicted RBP24.1■■□□□ 1.45
VPS26A-207ENST00000490696 C9orf84Q5VXU9 1444 aa24.1■■□□□ 1.45
VPS26A-207ENST00000490696 DIP2CQ9Y2E4 1556 aa24.09■■□□□ 1.45
VPS26A-207ENST00000490696 MYT1LQ9UL68 1186 aa24.08■■□□□ 1.45
VPS26A-207ENST00000490696 KIDINS220Q9ULH0 1771 aa24.08■■□□□ 1.44
VPS26A-207ENST00000490696 CAMSAP2Q08AD1 1489 aa24.07■■□□□ 1.44
VPS26A-207ENST00000490696 BCORL1Q5H9F3 1711 aa24.07■■□□□ 1.44
VPS26A-207ENST00000490696 ABCA6Q8N139 1617 aa24.07■■□□□ 1.44
VPS26A-207ENST00000490696 ADAMTSL3P82987 1691 aa24.07■■□□□ 1.44
VPS26A-207ENST00000490696 MYOM3Q5VTT5 1437 aa24.07■■□□□ 1.44
VPS26A-207ENST00000490696 SPAG9O60271 1321 aaKnown RBP24.06■■□□□ 1.44
VPS26A-207ENST00000490696 REREQ9P2R6 1566 aa24.04■■□□□ 1.44
VPS26A-207ENST00000490696 MIA2Q96PC5 1412 aa24.04■■□□□ 1.44
VPS26A-207ENST00000490696 INO80Q9ULG1 1556 aaPredicted RBP24.02■■□□□ 1.44
VPS26A-207ENST00000490696 ATP7AQ04656 1500 aa24.01■■□□□ 1.43
VPS26A-207ENST00000490696 CCDC141Q6ZP82 1450 aa24■■□□□ 1.43
VPS26A-207ENST00000490696 RSPH4AQ5TD94 716 aa23.99■■□□□ 1.43
VPS26A-207ENST00000490696 ARHGEF5Q12774 1597 aa23.98■■□□□ 1.43
VPS26A-207ENST00000490696 MADDQ8WXG6 1647 aa23.98■■□□□ 1.43
VPS26A-207ENST00000490696 AGLP35573 1532 aa23.96■■□□□ 1.43
VPS26A-207ENST00000490696 RTEL1-TNFRSF6BF6WH68 1400 aa23.96■■□□□ 1.43
VPS26A-207ENST00000490696 MLECQ14165 292 aa23.96■■□□□ 1.43
VPS26A-207ENST00000490696 PTPRMP28827 1452 aa23.94■■□□□ 1.42
VPS26A-207ENST00000490696 FGD6Q6ZV73 1430 aa23.93■■□□□ 1.42
VPS26A-207ENST00000490696 PTPN23Q9H3S7 1636 aa23.91■■□□□ 1.42
VPS26A-207ENST00000490696 A2MP01023 1474 aa23.9■■□□□ 1.42
VPS26A-207ENST00000490696 PLXNC1O60486 1568 aa23.9■■□□□ 1.42
VPS26A-207ENST00000490696 RIMS1Q86UR5 1692 aaKnown RBP23.89■■□□□ 1.42
VPS26A-207ENST00000490696 TCOF1Q13428 1488 aaKnown RBP23.88■■□□□ 1.41
VPS26A-207ENST00000490696 TSPY4P0CV99 314 aa23.88■■□□□ 1.41
VPS26A-207ENST00000490696 TSPY10P0CW01 314 aa23.88■■□□□ 1.41
VPS26A-207ENST00000490696 ADGBQ8N7X0 1667 aa23.87■■□□□ 1.41
VPS26A-207ENST00000490696 FER1L4A9Z1Z3 1794 aa23.87■■□□□ 1.41
VPS26A-207ENST00000490696 MAST1Q9Y2H9 1570 aa23.85■■□□□ 1.41
VPS26A-207ENST00000490696 DHX29Q7Z478 1369 aaKnown RBP23.83■■□□□ 1.41
VPS26A-207ENST00000490696 ABCC5O15440 1437 aa23.83■■□□□ 1.4
VPS26A-207ENST00000490696 PPARGC1BQ86YN6 1023 aaKnown RBP23.8■■□□□ 1.4
VPS26A-207ENST00000490696 DAPK1P53355 1430 aa23.79■■□□□ 1.4
VPS26A-207ENST00000490696 FBXO41Q8TF61 875 aa23.79■■□□□ 1.4
VPS26A-207ENST00000490696 SHANK2Q9UPX8 1470 aa23.79■■□□□ 1.4
VPS26A-207ENST00000490696 DNMT1P26358 1616 aaKnown RBP23.78■■□□□ 1.4
VPS26A-207ENST00000490696 CROCC2H7BZ55 1655 aa23.77■■□□□ 1.4
VPS26A-207ENST00000490696 CNTLNQ9NXG0 1405 aa23.74■■□□□ 1.39
VPS26A-207ENST00000490696 FAM50AQ14320 339 aaKnown RBP23.73■■□□□ 1.39
VPS26A-207ENST00000490696 GGT6Q6P531 493 aa23.73■■□□□ 1.39
VPS26A-207ENST00000490696 PLPPR3Q6T4P5 718 aa23.73■■□□□ 1.39
VPS26A-207ENST00000490696 ESF1Q9H501 851 aaKnown RBP23.73■■□□□ 1.39
VPS26A-207ENST00000490696 CEBPAP49715 358 aaPredicted RBP23.72■■□□□ 1.39
VPS26A-207ENST00000490696 KIF3BO15066 747 aa23.71■■□□□ 1.39
VPS26A-207ENST00000490696 PPP6R1Q9UPN7 881 aa23.7■■□□□ 1.38
VPS26A-207ENST00000490696 KIF15Q9NS87 1388 aa23.68■■□□□ 1.38
VPS26A-207ENST00000490696 DUOX2Q9NRD8 1548 aa23.68■■□□□ 1.38
VPS26A-207ENST00000490696 C3P01024 1663 aa23.67■■□□□ 1.38
VPS26A-207ENST00000490696 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
VPS26A-207ENST00000490696 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
VPS26A-207ENST00000490696 MROH2AA6NES4 1674 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms