RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 PREX2Q70Z35 1606 aa30.69■■■□□ 2.5
SHROOM3-209ENST00000490690 CFDP1Q9UEE9 299 aaPredicted RBP30.68■■■□□ 2.5
SHROOM3-209ENST00000490690 TSPOAP1O95153 1857 aa30.67■■■□□ 2.5
SHROOM3-209ENST00000490690 PPRC1Q5VV67 1664 aaKnown RBP30.66■■■□□ 2.5
SHROOM3-209ENST00000490690 MYOM3Q5VTT5 1437 aa30.64■■■□□ 2.49
SHROOM3-209ENST00000490690 MIA2Q96PC5 1412 aa30.63■■■□□ 2.49
SHROOM3-209ENST00000490690 AKNAQ7Z591 1439 aa30.62■■■□□ 2.49
SHROOM3-209ENST00000490690 PLEKHH2Q8IVE3 1493 aa30.62■■■□□ 2.49
SHROOM3-209ENST00000490690 CDC42BPAQ5VT25 1732 aa30.61■■■□□ 2.49
SHROOM3-209ENST00000490690 CDC42BPBQ9Y5S2 1711 aa30.56■■■□□ 2.48
SHROOM3-209ENST00000490690 ADGRL1O94910 1474 aa30.56■■■□□ 2.48
SHROOM3-209ENST00000490690 ZNF777Q9ULD5 760 aaPredicted RBP30.53■■■□□ 2.48
SHROOM3-209ENST00000490690 KIAA1107Q9UPP5 1409 aa30.53■■■□□ 2.48
SHROOM3-209ENST00000490690 DENND4BO75064 1496 aaPredicted RBP30.5■■■□□ 2.47
SHROOM3-209ENST00000490690 KDM6BO15054 1643 aa30.5■■■□□ 2.47
SHROOM3-209ENST00000490690 SCAPERQ9BY12 1400 aa30.49■■■□□ 2.47
SHROOM3-209ENST00000490690 RSPH4AQ5TD94 716 aa30.49■■■□□ 2.47
SHROOM3-209ENST00000490690 FGD6Q6ZV73 1430 aa30.48■■■□□ 2.47
SHROOM3-209ENST00000490690 ABCC1P33527 1531 aa30.47■■■□□ 2.47
SHROOM3-209ENST00000490690 PPARGC1BQ86YN6 1023 aaKnown RBP30.44■■■□□ 2.46
SHROOM3-209ENST00000490690 SAMD9LQ8IVG5 1584 aa30.44■■■□□ 2.46
SHROOM3-209ENST00000490690 CAMSAP2Q08AD1 1489 aa30.44■■■□□ 2.46
SHROOM3-209ENST00000490690 ZNF518AQ6AHZ1 1483 aa30.44■■■□□ 2.46
SHROOM3-209ENST00000490690 POGZQ7Z3K3 1410 aa30.42■■■□□ 2.46
SHROOM3-209ENST00000490690 TCOF1Q13428 1488 aaKnown RBP30.39■■■□□ 2.46
SHROOM3-209ENST00000490690 SYCP2Q9BX26 1530 aa30.37■■■□□ 2.45
SHROOM3-209ENST00000490690 PTPN23Q9H3S7 1636 aa30.37■■■□□ 2.45
SHROOM3-209ENST00000490690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.36■■■□□ 2.45
SHROOM3-209ENST00000490690 COL17A1Q9UMD9 1497 aaPredicted RBP30.36■■■□□ 2.45
SHROOM3-209ENST00000490690 ZNF644Q9H582 1327 aaPredicted RBP30.35■■■□□ 2.45
SHROOM3-209ENST00000490690 MAGI2Q86UL8 1455 aa30.34■■■□□ 2.45
SHROOM3-209ENST00000490690 RAPGEF3O95398 923 aa30.33■■■□□ 2.45
SHROOM3-209ENST00000490690 HNRNPMP52272 730 aaKnown RBP eCLIP30.33■■■□□ 2.45
SHROOM3-209ENST00000490690 ARHGEF5Q12774 1597 aa30.32■■■□□ 2.45
SHROOM3-209ENST00000490690 CCDC141Q6ZP82 1450 aa30.32■■■□□ 2.44
SHROOM3-209ENST00000490690 MBD5Q9P267 1494 aa30.32■■■□□ 2.44
SHROOM3-209ENST00000490690 ARHGEF12Q9NZN5 1544 aa30.32■■■□□ 2.44
SHROOM3-209ENST00000490690 RRBP1Q9P2E9 1410 aaKnown RBP30.31■■■□□ 2.44
SHROOM3-209ENST00000490690 ZMYM4Q5VZL5 1548 aa30.31■■■□□ 2.44
SHROOM3-209ENST00000490690 KDM5CP41229 1560 aa30.3■■■□□ 2.44
SHROOM3-209ENST00000490690 TSPY4P0CV99 314 aa30.3■■■□□ 2.44
SHROOM3-209ENST00000490690 TSPY10P0CW01 314 aa30.3■■■□□ 2.44
SHROOM3-209ENST00000490690 RICTORQ6R327 1708 aa30.3■■■□□ 2.44
SHROOM3-209ENST00000490690 TRAPPC8Q9Y2L5 1435 aa30.3■■■□□ 2.44
SHROOM3-209ENST00000490690 FAM50AQ14320 339 aaKnown RBP30.29■■■□□ 2.44
SHROOM3-209ENST00000490690 AFAP1Q8N556 730 aa30.27■■■□□ 2.44
SHROOM3-209ENST00000490690 SPAG9O60271 1321 aaKnown RBP30.26■■■□□ 2.44
SHROOM3-209ENST00000490690 MLH3Q9UHC1 1453 aa30.26■■■□□ 2.44
SHROOM3-209ENST00000490690 FRMPD1Q5SYB0 1578 aa30.26■■■□□ 2.43
SHROOM3-209ENST00000490690 RTEL1-TNFRSF6BF6WH68 1400 aa30.24■■■□□ 2.43
SHROOM3-209ENST00000490690 MYT1LQ9UL68 1186 aa30.24■■■□□ 2.43
SHROOM3-209ENST00000490690 HECW2Q9P2P5 1572 aa30.22■■■□□ 2.43
SHROOM3-209ENST00000490690 SHANK2Q9UPX8 1470 aa30.21■■■□□ 2.43
SHROOM3-209ENST00000490690 DAPK1P53355 1430 aa30.19■■■□□ 2.42
SHROOM3-209ENST00000490690 DNMT1P26358 1616 aaKnown RBP30.18■■■□□ 2.42
SHROOM3-209ENST00000490690 ZFYVE16Q7Z3T8 1539 aa30.18■■■□□ 2.42
SHROOM3-209ENST00000490690 ABCC5O15440 1437 aa30.16■■■□□ 2.42
SHROOM3-209ENST00000490690 ATP7AQ04656 1500 aa30.15■■■□□ 2.42
SHROOM3-209ENST00000490690 MAST1Q9Y2H9 1570 aa30.15■■■□□ 2.42
SHROOM3-209ENST00000490690 C9orf84Q5VXU9 1444 aa30.14■■■□□ 2.42
SHROOM3-209ENST00000490690 ARHGEF40Q8TER5 1519 aa30.13■■■□□ 2.41
SHROOM3-209ENST00000490690 INO80Q9ULG1 1556 aaPredicted RBP30.11■■■□□ 2.41
SHROOM3-209ENST00000490690 ATP10AO60312 1499 aa30.09■■■□□ 2.41
SHROOM3-209ENST00000490690 ANKRD30AQ9BXX3 1397 aa30.08■■■□□ 2.41
SHROOM3-209ENST00000490690 CROCC2H7BZ55 1655 aa30.07■■■□□ 2.41
SHROOM3-209ENST00000490690 YEATS2Q9ULM3 1422 aa30.07■■■□□ 2.4
SHROOM3-209ENST00000490690 KIDINS220Q9ULH0 1771 aa30.05■■■□□ 2.4
SHROOM3-209ENST00000490690 ROCK1Q13464 1354 aa30.03■■■□□ 2.4
SHROOM3-209ENST00000490690 REREQ9P2R6 1566 aa30.03■■■□□ 2.4
SHROOM3-209ENST00000490690 ADGRL2O95490 1459 aa30.03■■■□□ 2.4
SHROOM3-209ENST00000490690 PLXNC1O60486 1568 aa30.03■■■□□ 2.4
SHROOM3-209ENST00000490690 DIP2CQ9Y2E4 1556 aa30.03■■■□□ 2.4
SHROOM3-209ENST00000490690 ABCA6Q8N139 1617 aa29.99■■■□□ 2.39
SHROOM3-209ENST00000490690 A2MP01023 1474 aa29.99■■■□□ 2.39
SHROOM3-209ENST00000490690 ADGBQ8N7X0 1667 aa29.98■■■□□ 2.39
SHROOM3-209ENST00000490690 ITGAEP38570 1179 aa29.98■■■□□ 2.39
SHROOM3-209ENST00000490690 NCOA1Q15788 1441 aa29.97■■■□□ 2.39
SHROOM3-209ENST00000490690 CHIC2Q9UKJ5 165 aa29.97■■■□□ 2.39
SHROOM3-209ENST00000490690 DHX29Q7Z478 1369 aaKnown RBP29.97■■■□□ 2.39
SHROOM3-209ENST00000490690 KIF15Q9NS87 1388 aa29.97■■■□□ 2.39
SHROOM3-209ENST00000490690 DUOX2Q9NRD8 1548 aa29.95■■■□□ 2.38
SHROOM3-209ENST00000490690 AGLP35573 1532 aa29.94■■■□□ 2.38
SHROOM3-209ENST00000490690 ARID4BQ4LE39 1312 aaPredicted RBP29.93■■■□□ 2.38
SHROOM3-209ENST00000490690 PTPRKQ15262 1439 aa29.92■■■□□ 2.38
SHROOM3-209ENST00000490690 ERBINQ96RT1 1412 aa29.91■■■□□ 2.38
SHROOM3-209ENST00000490690 RRP7BPQ9NSQ0 103 aa29.9■■■□□ 2.38
SHROOM3-209ENST00000490690 TRIM26Q12899 539 aaPredicted RBP29.84■■■□□ 2.37
SHROOM3-209ENST00000490690 EIF2AK4Q9P2K8 1649 aaKnown RBP29.83■■■□□ 2.37
SHROOM3-209ENST00000490690 ANKRD50Q9ULJ7 1429 aa29.83■■■□□ 2.37
SHROOM3-209ENST00000490690 ACIN1Q9UKV3 1341 aaKnown RBP29.83■■■□□ 2.37
SHROOM3-209ENST00000490690 PPP6R1Q9UPN7 881 aa29.83■■■□□ 2.37
SHROOM3-209ENST00000490690 HFM1A2PYH4 1435 aa29.81■■■□□ 2.36
SHROOM3-209ENST00000490690 KIF3BO15066 747 aa29.78■■■□□ 2.36
SHROOM3-209ENST00000490690 BCORL1Q5H9F3 1711 aa29.77■■■□□ 2.36
SHROOM3-209ENST00000490690 FAM135AQ9P2D6 1515 aa29.76■■■□□ 2.35
SHROOM3-209ENST00000490690 ESF1Q9H501 851 aaKnown RBP29.75■■■□□ 2.35
SHROOM3-209ENST00000490690 NAIPQ13075 1403 aa29.73■■■□□ 2.35
SHROOM3-209ENST00000490690 KANK1Q14678 1352 aa29.7■■■□□ 2.35
SHROOM3-209ENST00000490690 GGT6Q6P531 493 aa29.7■■■□□ 2.35
SHROOM3-209ENST00000490690 CNTLNQ9NXG0 1405 aa29.7■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms