RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 MYO5CQ9NQX4 1742 aa24.63■■□□□ 1.53
PCCB-218ENST00000490504 ARID4BQ4LE39 1312 aaPredicted RBP24.63■■□□□ 1.53
PCCB-218ENST00000490504 YEATS2Q9ULM3 1422 aa24.62■■□□□ 1.53
PCCB-218ENST00000490504 ZMYM4Q5VZL5 1548 aa24.61■■□□□ 1.53
PCCB-218ENST00000490504 ARHGEF40Q8TER5 1519 aa24.6■■□□□ 1.53
PCCB-218ENST00000490504 AFAP1Q8N556 730 aa24.58■■□□□ 1.53
PCCB-218ENST00000490504 MAGI2Q86UL8 1455 aa24.58■■□□□ 1.53
PCCB-218ENST00000490504 ZFYVE16Q7Z3T8 1539 aa24.56■■□□□ 1.52
PCCB-218ENST00000490504 MTUS2Q5JR59 1369 aa24.53■■□□□ 1.52
PCCB-218ENST00000490504 CDC42BPBQ9Y5S2 1711 aa24.53■■□□□ 1.52
PCCB-218ENST00000490504 ZNF518AQ6AHZ1 1483 aa24.52■■□□□ 1.52
PCCB-218ENST00000490504 PREX2Q70Z35 1606 aa24.51■■□□□ 1.51
PCCB-218ENST00000490504 GPATCH8Q9UKJ3 1502 aaKnown RBP24.51■■□□□ 1.51
PCCB-218ENST00000490504 ADAMTSL3P82987 1691 aa24.5■■□□□ 1.51
PCCB-218ENST00000490504 ZNF777Q9ULD5 760 aaPredicted RBP24.5■■□□□ 1.51
PCCB-218ENST00000490504 ARHGEF12Q9NZN5 1544 aa24.5■■□□□ 1.51
PCCB-218ENST00000490504 TRAPPC8Q9Y2L5 1435 aa24.49■■□□□ 1.51
PCCB-218ENST00000490504 BCORL1Q5H9F3 1711 aa24.48■■□□□ 1.51
PCCB-218ENST00000490504 ATP10AO60312 1499 aa24.48■■□□□ 1.51
PCCB-218ENST00000490504 PTPRMP28827 1452 aa24.48■■□□□ 1.51
PCCB-218ENST00000490504 MYT1LQ9UL68 1186 aa24.47■■□□□ 1.51
PCCB-218ENST00000490504 CCNB3Q8WWL7 1395 aa24.46■■□□□ 1.51
PCCB-218ENST00000490504 MLECQ14165 292 aa24.46■■□□□ 1.51
PCCB-218ENST00000490504 ABCC1P33527 1531 aa24.46■■□□□ 1.51
PCCB-218ENST00000490504 KDM5CP41229 1560 aa24.45■■□□□ 1.51
PCCB-218ENST00000490504 CFDP1Q9UEE9 299 aaPredicted RBP24.45■■□□□ 1.5
PCCB-218ENST00000490504 CDC42BPAQ5VT25 1732 aa24.44■■□□□ 1.5
PCCB-218ENST00000490504 SIGLEC1Q9BZZ2 1709 aa24.44■■□□□ 1.5
PCCB-218ENST00000490504 C9orf84Q5VXU9 1444 aa24.43■■□□□ 1.5
PCCB-218ENST00000490504 MADDQ8WXG6 1647 aa24.42■■□□□ 1.5
PCCB-218ENST00000490504 HNRNPMP52272 730 aaKnown RBP eCLIP24.42■■□□□ 1.51e-7■■■□□ 18.3
PCCB-218ENST00000490504 VPS8Q8N3P4 1428 aa24.41■■□□□ 1.5
PCCB-218ENST00000490504 MLH3Q9UHC1 1453 aa24.41■■□□□ 1.5
PCCB-218ENST00000490504 EHBP1L1Q8N3D4 1523 aa24.4■■□□□ 1.5
PCCB-218ENST00000490504 SAMD9LQ8IVG5 1584 aa24.38■■□□□ 1.49
PCCB-218ENST00000490504 HECW2Q9P2P5 1572 aa24.38■■□□□ 1.49
PCCB-218ENST00000490504 ITSN2Q9NZM3 1697 aa24.37■■□□□ 1.49
PCCB-218ENST00000490504 ZNF644Q9H582 1327 aaPredicted RBP24.36■■□□□ 1.49
PCCB-218ENST00000490504 KIAA1107Q9UPP5 1409 aa24.35■■□□□ 1.49
PCCB-218ENST00000490504 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
PCCB-218ENST00000490504 DIP2CQ9Y2E4 1556 aa24.35■■□□□ 1.49
PCCB-218ENST00000490504 PLPPR3Q6T4P5 718 aa24.34■■□□□ 1.49
PCCB-218ENST00000490504 TIAM1Q13009 1591 aa24.33■■□□□ 1.48
PCCB-218ENST00000490504 PLEKHH2Q8IVE3 1493 aa24.32■■□□□ 1.48
PCCB-218ENST00000490504 SPAG9O60271 1321 aaKnown RBP24.32■■□□□ 1.48
PCCB-218ENST00000490504 RIMS1Q86UR5 1692 aaKnown RBP24.31■■□□□ 1.48
PCCB-218ENST00000490504 ABCA6Q8N139 1617 aa24.31■■□□□ 1.48
PCCB-218ENST00000490504 NCOA2Q15596 1464 aa24.31■■□□□ 1.48
PCCB-218ENST00000490504 KANK4Q5T7N3 995 aaPredicted RBP24.28■■□□□ 1.48
PCCB-218ENST00000490504 REREQ9P2R6 1566 aa24.27■■□□□ 1.48
PCCB-218ENST00000490504 KIDINS220Q9ULH0 1771 aa24.27■■□□□ 1.48
PCCB-218ENST00000490504 LRRC9Q6ZRR7 1453 aa24.27■■□□□ 1.48
PCCB-218ENST00000490504 MBD5Q9P267 1494 aa24.24■■□□□ 1.47
PCCB-218ENST00000490504 CEBPAP49715 358 aaPredicted RBP24.24■■□□□ 1.47
PCCB-218ENST00000490504 AGLP35573 1532 aa24.23■■□□□ 1.47
PCCB-218ENST00000490504 SUPT6HQ7KZ85 1726 aaKnown RBP24.22■■□□□ 1.47
PCCB-218ENST00000490504 MAP3K1Q13233 1512 aa24.21■■□□□ 1.47
PCCB-218ENST00000490504 FER1L4A9Z1Z3 1794 aa24.2■■□□□ 1.46
PCCB-218ENST00000490504 ATP7AQ04656 1500 aa24.2■■□□□ 1.46
PCCB-218ENST00000490504 LMTK3Q96Q04 1460 aa24.19■■□□□ 1.46
PCCB-218ENST00000490504 TRIM26Q12899 539 aaPredicted RBP24.19■■□□□ 1.46
PCCB-218ENST00000490504 PCGF6Q9BYE7 350 aa24.17■■□□□ 1.46
PCCB-218ENST00000490504 INO80Q9ULG1 1556 aaPredicted RBP24.16■■□□□ 1.46
PCCB-218ENST00000490504 CAMSAP2Q08AD1 1489 aa24.16■■□□□ 1.46
PCCB-218ENST00000490504 A2MP01023 1474 aa24.14■■□□□ 1.46
PCCB-218ENST00000490504 HSPA2P54652 639 aa24.14■■□□□ 1.46
PCCB-218ENST00000490504 ESF1Q9H501 851 aaKnown RBP24.14■■□□□ 1.46
PCCB-218ENST00000490504 APLP2Q06481 763 aa24.13■■□□□ 1.45
PCCB-218ENST00000490504 RSPH4AQ5TD94 716 aa24.12■■□□□ 1.45
PCCB-218ENST00000490504 RTEL1-TNFRSF6BF6WH68 1400 aa24.11■■□□□ 1.45
PCCB-218ENST00000490504 CCDC141Q6ZP82 1450 aa24.1■■□□□ 1.45
PCCB-218ENST00000490504 PLXNC1O60486 1568 aa24.09■■□□□ 1.45
PCCB-218ENST00000490504 MYOM3Q5VTT5 1437 aa24.07■■□□□ 1.44
PCCB-218ENST00000490504 GGT6Q6P531 493 aa24.07■■□□□ 1.44
PCCB-218ENST00000490504 CNTLNQ9NXG0 1405 aa24.06■■□□□ 1.44
PCCB-218ENST00000490504 DHX29Q7Z478 1369 aaKnown RBP24.05■■□□□ 1.44
PCCB-218ENST00000490504 TSPY4P0CV99 314 aa24.05■■□□□ 1.44
PCCB-218ENST00000490504 TSPY10P0CW01 314 aa24.05■■□□□ 1.44
PCCB-218ENST00000490504 PPARGC1BQ86YN6 1023 aaKnown RBP24.04■■□□□ 1.44
PCCB-218ENST00000490504 MIA2Q96PC5 1412 aa24.04■■□□□ 1.44
PCCB-218ENST00000490504 ARHGEF5Q12774 1597 aa24.02■■□□□ 1.44
PCCB-218ENST00000490504 ZMYM3Q14202 1370 aa24.02■■□□□ 1.44
PCCB-218ENST00000490504 ADGBQ8N7X0 1667 aa24■■□□□ 1.43
PCCB-218ENST00000490504 C3P01024 1663 aa23.99■■□□□ 1.43
PCCB-218ENST00000490504 KIF3BO15066 747 aa23.99■■□□□ 1.43
PCCB-218ENST00000490504 UHRF1BP1Q6BDS2 1440 aa23.98■■□□□ 1.43
PCCB-218ENST00000490504 PPP6R1Q9UPN7 881 aa23.98■■□□□ 1.43
PCCB-218ENST00000490504 PREX1Q8TCU6 1659 aa23.95■■□□□ 1.42
PCCB-218ENST00000490504 ILDR1Q86SU0 546 aaPredicted RBP23.93■■□□□ 1.42
PCCB-218ENST00000490504 NPATQ14207 1427 aa23.91■■□□□ 1.42
PCCB-218ENST00000490504 CLTCQ00610 1675 aaKnown RBP23.9■■□□□ 1.42
PCCB-218ENST00000490504 SETD1BQ9UPS6 1966 aaKnown RBP23.9■■□□□ 1.42
PCCB-218ENST00000490504 FGD6Q6ZV73 1430 aa23.9■■□□□ 1.42
PCCB-218ENST00000490504 MROH2AA6NES4 1674 aa23.9■■□□□ 1.42
PCCB-218ENST00000490504 MAST1Q9Y2H9 1570 aa23.89■■□□□ 1.41
PCCB-218ENST00000490504 ABCC5O15440 1437 aa23.88■■□□□ 1.41
PCCB-218ENST00000490504 PTPRKQ15262 1439 aa23.88■■□□□ 1.41
PCCB-218ENST00000490504 PTPN23Q9H3S7 1636 aa23.86■■□□□ 1.41
PCCB-218ENST00000490504 WASHC2CQ9Y4E1 1318 aa23.86■■□□□ 1.41
PCCB-218ENST00000490504 TCOF1Q13428 1488 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms