RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 KIF14Q15058 1648 aa18.33■□□□□ 0.52
CDCP1-203ENST00000490471 TTC37Q6PGP7 1564 aa18.33■□□□□ 0.52
CDCP1-203ENST00000490471 CCDC18Q5T9S5 1454 aa18.33■□□□□ 0.52
CDCP1-203ENST00000490471 TROQ12816 1431 aaPredicted RBP18.32■□□□□ 0.52
CDCP1-203ENST00000490471 MYO5CQ9NQX4 1742 aa18.32■□□□□ 0.52
CDCP1-203ENST00000490471 MYT1LQ9UL68 1186 aa18.32■□□□□ 0.52
CDCP1-203ENST00000490471 RICTORQ6R327 1708 aa18.32■□□□□ 0.52
CDCP1-203ENST00000490471 SCAPERQ9BY12 1400 aa18.32■□□□□ 0.52
CDCP1-203ENST00000490471 HECW2Q9P2P5 1572 aa18.3■□□□□ 0.52
CDCP1-203ENST00000490471 FRMPD1Q5SYB0 1578 aa18.3■□□□□ 0.52
CDCP1-203ENST00000490471 ZFYVE16Q7Z3T8 1539 aa18.29■□□□□ 0.52
CDCP1-203ENST00000490471 ARHGEF40Q8TER5 1519 aa18.29■□□□□ 0.52
CDCP1-203ENST00000490471 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
CDCP1-203ENST00000490471 ZMYM4Q5VZL5 1548 aa18.28■□□□□ 0.52
CDCP1-203ENST00000490471 ADAMTSL3P82987 1691 aa18.28■□□□□ 0.52
CDCP1-203ENST00000490471 PTPRMP28827 1452 aa18.28■□□□□ 0.52
CDCP1-203ENST00000490471 CASKIN1Q8WXD9 1431 aa18.28■□□□□ 0.52
CDCP1-203ENST00000490471 ARHGAP5Q13017 1502 aa18.26■□□□□ 0.51
CDCP1-203ENST00000490471 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
CDCP1-203ENST00000490471 ATP10AO60312 1499 aa18.22■□□□□ 0.51
CDCP1-203ENST00000490471 FYCO1Q9BQS8 1478 aa18.22■□□□□ 0.51
CDCP1-203ENST00000490471 PPP4R3CPQ6ZMV5 832 aa18.22■□□□□ 0.51
CDCP1-203ENST00000490471 MADDQ8WXG6 1647 aa18.2■□□□□ 0.5
CDCP1-203ENST00000490471 MLECQ14165 292 aa18.19■□□□□ 0.5
CDCP1-203ENST00000490471 C9orf84Q5VXU9 1444 aa18.19■□□□□ 0.5
CDCP1-203ENST00000490471 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
CDCP1-203ENST00000490471 PCF11O94913 1555 aaKnown RBP18.17■□□□□ 0.5
CDCP1-203ENST00000490471 YEATS2Q9ULM3 1422 aa18.17■□□□□ 0.5
CDCP1-203ENST00000490471 RIMS1Q86UR5 1692 aaKnown RBP18.17■□□□□ 0.5
CDCP1-203ENST00000490471 AFAP1Q8N556 730 aa18.15■□□□□ 0.5
CDCP1-203ENST00000490471 LRRIQ1Q96JM4 1722 aa18.14■□□□□ 0.49
CDCP1-203ENST00000490471 PREX2Q70Z35 1606 aa18.12■□□□□ 0.49
CDCP1-203ENST00000490471 ZNF777Q9ULD5 760 aaPredicted RBP18.12■□□□□ 0.49
CDCP1-203ENST00000490471 MTUS2Q5JR59 1369 aa18.12■□□□□ 0.49
CDCP1-203ENST00000490471 CDC42BPBQ9Y5S2 1711 aa18.12■□□□□ 0.49
CDCP1-203ENST00000490471 ILDR1Q86SU0 546 aaPredicted RBP18.11■□□□□ 0.49
CDCP1-203ENST00000490471 MLH3Q9UHC1 1453 aa18.11■□□□□ 0.49
CDCP1-203ENST00000490471 FER1L4A9Z1Z3 1794 aa18.11■□□□□ 0.49
CDCP1-203ENST00000490471 KDM5CP41229 1560 aa18.1■□□□□ 0.49
CDCP1-203ENST00000490471 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
CDCP1-203ENST00000490471 CCNB3Q8WWL7 1395 aa18.09■□□□□ 0.49
CDCP1-203ENST00000490471 CFDP1Q9UEE9 299 aaPredicted RBP18.09■□□□□ 0.49
CDCP1-203ENST00000490471 REREQ9P2R6 1566 aa18.06■□□□□ 0.48
CDCP1-203ENST00000490471 ABCC1P33527 1531 aa18.06■□□□□ 0.48
CDCP1-203ENST00000490471 ARHGEF12Q9NZN5 1544 aa18.05■□□□□ 0.48
CDCP1-203ENST00000490471 CDC42BPAQ5VT25 1732 aa18.05■□□□□ 0.48
CDCP1-203ENST00000490471 ITSN2Q9NZM3 1697 aa18.05■□□□□ 0.48
CDCP1-203ENST00000490471 SPAG9O60271 1321 aaKnown RBP18.04■□□□□ 0.48
CDCP1-203ENST00000490471 LMTK3Q96Q04 1460 aa18.04■□□□□ 0.48
CDCP1-203ENST00000490471 KIAA1107Q9UPP5 1409 aa18.02■□□□□ 0.48
CDCP1-203ENST00000490471 TRAPPC8Q9Y2L5 1435 aa18.02■□□□□ 0.48
CDCP1-203ENST00000490471 AGLP35573 1532 aa18.02■□□□□ 0.47
CDCP1-203ENST00000490471 GPATCH8Q9UKJ3 1502 aaKnown RBP18.02■□□□□ 0.47
CDCP1-203ENST00000490471 DIP2CQ9Y2E4 1556 aa18.01■□□□□ 0.47
CDCP1-203ENST00000490471 CEP162Q5TB80 1403 aa18■□□□□ 0.47
CDCP1-203ENST00000490471 CNTLNQ9NXG0 1405 aa18■□□□□ 0.47
CDCP1-203ENST00000490471 HNRNPMP52272 730 aaKnown RBP eCLIP18■□□□□ 0.47
CDCP1-203ENST00000490471 FBXO41Q8TF61 875 aa18■□□□□ 0.47
CDCP1-203ENST00000490471 SETD1BQ9UPS6 1966 aaKnown RBP17.99■□□□□ 0.47
CDCP1-203ENST00000490471 RSPH4AQ5TD94 716 aa17.99■□□□□ 0.47
CDCP1-203ENST00000490471 EHBP1L1Q8N3D4 1523 aa17.98■□□□□ 0.47
CDCP1-203ENST00000490471 SIGLEC1Q9BZZ2 1709 aa17.98■□□□□ 0.47
CDCP1-203ENST00000490471 HSPA2P54652 639 aa17.98■□□□□ 0.47
CDCP1-203ENST00000490471 UHRF1BP1Q6BDS2 1440 aa17.98■□□□□ 0.47
CDCP1-203ENST00000490471 PREX1Q8TCU6 1659 aa17.97■□□□□ 0.47
CDCP1-203ENST00000490471 ABCA6Q8N139 1617 aa17.97■□□□□ 0.47
CDCP1-203ENST00000490471 CEBPAP49715 358 aaPredicted RBP17.96■□□□□ 0.47
CDCP1-203ENST00000490471 SAMD9LQ8IVG5 1584 aa17.96■□□□□ 0.46
CDCP1-203ENST00000490471 KIDINS220Q9ULH0 1771 aa17.95■□□□□ 0.46
CDCP1-203ENST00000490471 SYCP2Q9BX26 1530 aa17.95■□□□□ 0.46
CDCP1-203ENST00000490471 ATP7AQ04656 1500 aa17.92■□□□□ 0.46
CDCP1-203ENST00000490471 SUPT6HQ7KZ85 1726 aaKnown RBP17.9■□□□□ 0.46
CDCP1-203ENST00000490471 APLP2Q06481 763 aa17.9■□□□□ 0.46
CDCP1-203ENST00000490471 A2MP01023 1474 aa17.89■□□□□ 0.45
CDCP1-203ENST00000490471 TSPY4P0CV99 314 aa17.89■□□□□ 0.45
CDCP1-203ENST00000490471 TSPY10P0CW01 314 aa17.89■□□□□ 0.45
CDCP1-203ENST00000490471 RTEL1-TNFRSF6BF6WH68 1400 aa17.89■□□□□ 0.45
CDCP1-203ENST00000490471 GGT6Q6P531 493 aa17.88■□□□□ 0.45
CDCP1-203ENST00000490471 CNKSR2Q8WXI2 1034 aa17.88■□□□□ 0.45
CDCP1-203ENST00000490471 C3P01024 1663 aa17.87■□□□□ 0.45
CDCP1-203ENST00000490471 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
CDCP1-203ENST00000490471 NPATQ14207 1427 aa17.86■□□□□ 0.45
CDCP1-203ENST00000490471 TIAM1Q13009 1591 aa17.86■□□□□ 0.45
CDCP1-203ENST00000490471 MROH2AA6NES4 1674 aa17.86■□□□□ 0.45
CDCP1-203ENST00000490471 ZMYM3Q14202 1370 aa17.85■□□□□ 0.45
CDCP1-203ENST00000490471 INO80Q9ULG1 1556 aaPredicted RBP17.84■□□□□ 0.45
CDCP1-203ENST00000490471 VPS8Q8N3P4 1428 aa17.84■□□□□ 0.45
CDCP1-203ENST00000490471 CERKQ8TCT0 537 aa17.84■□□□□ 0.45
CDCP1-203ENST00000490471 NCOA2Q15596 1464 aa17.83■□□□□ 0.45
CDCP1-203ENST00000490471 HOXD11P31277 338 aaPredicted RBP17.82■□□□□ 0.44
CDCP1-203ENST00000490471 ZNF644Q9H582 1327 aaPredicted RBP17.81■□□□□ 0.44
CDCP1-203ENST00000490471 LOC105371045A0A1W2PR82 267 aa17.81■□□□□ 0.44
CDCP1-203ENST00000490471 CCDC141Q6ZP82 1450 aa17.81■□□□□ 0.44
CDCP1-203ENST00000490471 DHX29Q7Z478 1369 aaKnown RBP17.8■□□□□ 0.44
CDCP1-203ENST00000490471 MBD5Q9P267 1494 aa17.8■□□□□ 0.44
CDCP1-203ENST00000490471 PTPRTO14522 1441 aa17.79■□□□□ 0.44
CDCP1-203ENST00000490471 PLXNC1O60486 1568 aa17.79■□□□□ 0.44
CDCP1-203ENST00000490471 MAP3K1Q13233 1512 aa17.78■□□□□ 0.44
CDCP1-203ENST00000490471 KIF3BO15066 747 aa17.78■□□□□ 0.44
CDCP1-203ENST00000490471 CAMSAP2Q08AD1 1489 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms