RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TEX14Q8IWB6 1497 aa13.18□□□□□ -0.3
PDLIM1-203ENST00000490391 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
PDLIM1-203ENST00000490391 UHRF1BP1LA0JNW5 1464 aa13.16□□□□□ -0.3
PDLIM1-203ENST00000490391 OTUD5Q96G74 571 aa13.15□□□□□ -0.3
PDLIM1-203ENST00000490391 SOCS7O14512 581 aa13.14□□□□□ -0.31
PDLIM1-203ENST00000490391 TNIKQ9UKE5 1360 aa13.13□□□□□ -0.31
PDLIM1-203ENST00000490391 ILDR2Q71H61 639 aa13.13□□□□□ -0.31
PDLIM1-203ENST00000490391 KDM5BQ9UGL1 1544 aa13.12□□□□□ -0.31
PDLIM1-203ENST00000490391 KIF21BO75037 1637 aa13.11□□□□□ -0.31
PDLIM1-203ENST00000490391 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
PDLIM1-203ENST00000490391 UACAQ9BZF9 1416 aa13.09□□□□□ -0.31
PDLIM1-203ENST00000490391 TTBK1Q5TCY1 1321 aaPredicted RBP13.09□□□□□ -0.31
PDLIM1-203ENST00000490391 PTPRMP28827 1452 aa13.08□□□□□ -0.32
PDLIM1-203ENST00000490391 CARMIL2Q6F5E8 1435 aa13.07□□□□□ -0.32
PDLIM1-203ENST00000490391 POTEMA6NI47 508 aa13.07□□□□□ -0.32
PDLIM1-203ENST00000490391 PCF11O94913 1555 aaKnown RBP13.07□□□□□ -0.32
PDLIM1-203ENST00000490391 IGF1RP08069 1367 aa13.07□□□□□ -0.32
PDLIM1-203ENST00000490391 ZCCHC11Q5TAX3 1644 aaKnown RBP13.06□□□□□ -0.32
PDLIM1-203ENST00000490391 ADAMTSL3P82987 1691 aa13.06□□□□□ -0.32
PDLIM1-203ENST00000490391 MAGI3Q5TCQ9 1506 aa13.05□□□□□ -0.32
PDLIM1-203ENST00000490391 POTEB2H3BUK9 544 aa13.05□□□□□ -0.32
PDLIM1-203ENST00000490391 GALR2O43603 387 aaPredicted RBP13.05□□□□□ -0.32
PDLIM1-203ENST00000490391 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
PDLIM1-203ENST00000490391 DISP3Q9P2K9 1392 aa13.03□□□□□ -0.32
PDLIM1-203ENST00000490391 WDR7Q9Y4E6 1490 aa13.03□□□□□ -0.32
PDLIM1-203ENST00000490391 POTEGQ6S5H5 508 aa13.01□□□□□ -0.33
PDLIM1-203ENST00000490391 IQGAP2Q13576 1575 aa13.01□□□□□ -0.33
PDLIM1-203ENST00000490391 CFAP43Q8NDM7 1665 aa13.01□□□□□ -0.33
PDLIM1-203ENST00000490391 CD109Q6YHK3 1445 aa12.99□□□□□ -0.33
PDLIM1-203ENST00000490391 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
PDLIM1-203ENST00000490391 CREBZFQ9NS37 354 aa12.97□□□□□ -0.33
PDLIM1-203ENST00000490391 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
PDLIM1-203ENST00000490391 ARAP3Q8WWN8 1544 aa12.97□□□□□ -0.33
PDLIM1-203ENST00000490391 KIF27Q86VH2 1401 aa12.96□□□□□ -0.34
PDLIM1-203ENST00000490391 BCORL1Q5H9F3 1711 aa12.95□□□□□ -0.34
PDLIM1-203ENST00000490391 PCDH10Q9P2E7 1040 aa12.94□□□□□ -0.34
PDLIM1-203ENST00000490391 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
PDLIM1-203ENST00000490391 SPATA31D1Q6ZQQ2 1576 aa12.93□□□□□ -0.34
PDLIM1-203ENST00000490391 UGGT2Q9NYU1 1516 aa12.93□□□□□ -0.34
PDLIM1-203ENST00000490391 KIAA0556O60303 1618 aa12.91□□□□□ -0.34
PDLIM1-203ENST00000490391 HSPA2P54652 639 aa12.91□□□□□ -0.34
PDLIM1-203ENST00000490391 RIMS1Q86UR5 1692 aaKnown RBP12.87□□□□□ -0.35
PDLIM1-203ENST00000490391 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
PDLIM1-203ENST00000490391 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
PDLIM1-203ENST00000490391 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
PDLIM1-203ENST00000490391 FRMPD1Q5SYB0 1578 aa12.86□□□□□ -0.35
PDLIM1-203ENST00000490391 PAK3O75914 559 aaPredicted RBP12.85□□□□□ -0.35
PDLIM1-203ENST00000490391 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
PDLIM1-203ENST00000490391 ABCA8O94911 1581 aa12.85□□□□□ -0.35
PDLIM1-203ENST00000490391 RAPGEF3O95398 923 aa12.83□□□□□ -0.36
PDLIM1-203ENST00000490391 PHLDB1Q86UU1 1377 aa12.82□□□□□ -0.36
PDLIM1-203ENST00000490391 ABCA9Q8IUA7 1624 aa12.8□□□□□ -0.36
PDLIM1-203ENST00000490391 ARHGEF40Q8TER5 1519 aa12.8□□□□□ -0.36
PDLIM1-203ENST00000490391 NEO1Q92859 1461 aa12.79□□□□□ -0.36
PDLIM1-203ENST00000490391 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
PDLIM1-203ENST00000490391 ARID4BQ4LE39 1312 aaPredicted RBP12.79□□□□□ -0.36
PDLIM1-203ENST00000490391 SIGLEC1Q9BZZ2 1709 aa12.76□□□□□ -0.37
PDLIM1-203ENST00000490391 POTEJP0CG39 1038 aa12.76□□□□□ -0.37
PDLIM1-203ENST00000490391 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
PDLIM1-203ENST00000490391 ASTLQ6HA08 431 aaPredicted RBP12.75□□□□□ -0.37
PDLIM1-203ENST00000490391 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
PDLIM1-203ENST00000490391 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
PDLIM1-203ENST00000490391 TTC37Q6PGP7 1564 aa12.74□□□□□ -0.37
PDLIM1-203ENST00000490391 C7P10643 843 aa12.74□□□□□ -0.37
PDLIM1-203ENST00000490391 YEATS2Q9ULM3 1422 aa12.73□□□□□ -0.37
PDLIM1-203ENST00000490391 MAMSTRQ6ZN01 415 aa12.73□□□□□ -0.37
PDLIM1-203ENST00000490391 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
PDLIM1-203ENST00000490391 ATP10BO94823 1461 aa12.72□□□□□ -0.37
PDLIM1-203ENST00000490391 RICTORQ6R327 1708 aa12.72□□□□□ -0.37
PDLIM1-203ENST00000490391 PREX1Q8TCU6 1659 aa12.71□□□□□ -0.37
PDLIM1-203ENST00000490391 LCE2DQ5TA82 110 aaPredicted RBP12.71□□□□□ -0.37
PDLIM1-203ENST00000490391 FANCAO15360 1455 aa12.71□□□□□ -0.38
PDLIM1-203ENST00000490391 GOLGA3Q08378 1498 aa12.71□□□□□ -0.38
PDLIM1-203ENST00000490391 ATMINO43313 823 aaPredicted RBP12.7□□□□□ -0.38
PDLIM1-203ENST00000490391 FHOD3Q2V2M9 1422 aa12.7□□□□□ -0.38
PDLIM1-203ENST00000490391 FER1L4A9Z1Z3 1794 aa12.69□□□□□ -0.38
PDLIM1-203ENST00000490391 CTTNBP2Q8WZ74 1663 aa12.69□□□□□ -0.38
PDLIM1-203ENST00000490391 POGZQ7Z3K3 1410 aa12.69□□□□□ -0.38
PDLIM1-203ENST00000490391 LTBP4Q8N2S1 1624 aa12.69□□□□□ -0.38
PDLIM1-203ENST00000490391 ZMYM4Q5VZL5 1548 aa12.68□□□□□ -0.38
PDLIM1-203ENST00000490391 DENND4BO75064 1496 aaPredicted RBP12.67□□□□□ -0.38
PDLIM1-203ENST00000490391 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
PDLIM1-203ENST00000490391 MS4A3Q96HJ5 214 aa12.67□□□□□ -0.38
PDLIM1-203ENST00000490391 AKNAQ7Z591 1439 aa12.67□□□□□ -0.38
PDLIM1-203ENST00000490391 IQSEC2Q5JU85 1478 aa12.66□□□□□ -0.38
PDLIM1-203ENST00000490391 ARID3CA6NKF2 412 aa12.66□□□□□ -0.38
PDLIM1-203ENST00000490391 FAM163AQ96GL9 167 aaPredicted RBP12.65□□□□□ -0.38
PDLIM1-203ENST00000490391 ARHGEF12Q9NZN5 1544 aa12.65□□□□□ -0.38
PDLIM1-203ENST00000490391 PTPRTO14522 1441 aa12.64□□□□□ -0.39
PDLIM1-203ENST00000490391 ZFYVE16Q7Z3T8 1539 aa12.64□□□□□ -0.39
PDLIM1-203ENST00000490391 EFCAB5A4FU69 1503 aa12.62□□□□□ -0.39
PDLIM1-203ENST00000490391 MAGI2Q86UL8 1455 aa12.61□□□□□ -0.39
PDLIM1-203ENST00000490391 MLECQ14165 292 aa12.61□□□□□ -0.39
PDLIM1-203ENST00000490391 SCUBE2Q9NQ36 999 aa12.61□□□□□ -0.39
PDLIM1-203ENST00000490391 SETD1BQ9UPS6 1966 aaKnown RBP12.61□□□□□ -0.39
PDLIM1-203ENST00000490391 CEBPAP49715 358 aaPredicted RBP12.59□□□□□ -0.39
PDLIM1-203ENST00000490391 UHRF1BP1Q6BDS2 1440 aa12.59□□□□□ -0.39
PDLIM1-203ENST00000490391 HECW1Q76N89 1606 aa12.59□□□□□ -0.39
PDLIM1-203ENST00000490391 CFAP74Q9C0B2 1584 aa12.57□□□□□ -0.4
PDLIM1-203ENST00000490391 RAPGEF6Q8TEU7 1601 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms