RNA–Protein interactions for RNA: ENST00000490359.2

LRCH4-208, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-208ENST00000490359 MTUS2Q5JR59 1369 aa26.69■■□□□ 1.86
LRCH4-208ENST00000490359 POGZQ7Z3K3 1410 aa26.67■■□□□ 1.86
LRCH4-208ENST00000490359 VPS8Q8N3P4 1428 aa26.67■■□□□ 1.86
LRCH4-208ENST00000490359 SCAPERQ9BY12 1400 aa26.67■■□□□ 1.86
LRCH4-208ENST00000490359 RICTORQ6R327 1708 aa26.65■■□□□ 1.86
LRCH4-208ENST00000490359 PREX2Q70Z35 1606 aa26.62■■□□□ 1.85
LRCH4-208ENST00000490359 CDC42BPBQ9Y5S2 1711 aa26.6■■□□□ 1.85
LRCH4-208ENST00000490359 EHBP1L1Q8N3D4 1523 aa26.59■■□□□ 1.85
LRCH4-208ENST00000490359 ZMYM4Q5VZL5 1548 aa26.58■■□□□ 1.85
LRCH4-208ENST00000490359 CDC42BPAQ5VT25 1732 aa26.56■■□□□ 1.84
LRCH4-208ENST00000490359 MAGI2Q86UL8 1455 aa26.56■■□□□ 1.84
LRCH4-208ENST00000490359 CCNB3Q8WWL7 1395 aa26.56■■□□□ 1.84
LRCH4-208ENST00000490359 ARHGEF40Q8TER5 1519 aa26.55■■□□□ 1.84
LRCH4-208ENST00000490359 GPATCH8Q9UKJ3 1502 aaKnown RBP26.55■■□□□ 1.84
LRCH4-208ENST00000490359 ZFYVE16Q7Z3T8 1539 aa26.53■■□□□ 1.84
LRCH4-208ENST00000490359 TIAM1Q13009 1591 aa26.53■■□□□ 1.84
LRCH4-208ENST00000490359 ZNF518AQ6AHZ1 1483 aa26.52■■□□□ 1.84
LRCH4-208ENST00000490359 ZNF777Q9ULD5 760 aaPredicted RBP26.52■■□□□ 1.84
LRCH4-208ENST00000490359 YEATS2Q9ULM3 1422 aa26.51■■□□□ 1.83
LRCH4-208ENST00000490359 HECW2Q9P2P5 1572 aa26.5■■□□□ 1.83
LRCH4-208ENST00000490359 ABCC1P33527 1531 aa26.5■■□□□ 1.83
LRCH4-208ENST00000490359 MLECQ14165 292 aa26.5■■□□□ 1.83
LRCH4-208ENST00000490359 PLPPR3Q6T4P5 718 aa26.5■■□□□ 1.83
LRCH4-208ENST00000490359 AFAP1Q8N556 730 aa26.5■■□□□ 1.83
LRCH4-208ENST00000490359 CFDP1Q9UEE9 299 aaPredicted RBP26.5■■□□□ 1.83
LRCH4-208ENST00000490359 PTPRMP28827 1452 aa26.49■■□□□ 1.83
LRCH4-208ENST00000490359 ESF1Q9H501 851 aaKnown RBP26.49■■□□□ 1.83
LRCH4-208ENST00000490359 ARHGEF12Q9NZN5 1544 aa26.48■■□□□ 1.83
LRCH4-208ENST00000490359 TRAPPC8Q9Y2L5 1435 aa26.46■■□□□ 1.83
LRCH4-208ENST00000490359 KDM5CP41229 1560 aa26.45■■□□□ 1.82
LRCH4-208ENST00000490359 SAMD9LQ8IVG5 1584 aa26.45■■□□□ 1.82
LRCH4-208ENST00000490359 MAP3K1Q13233 1512 aa26.44■■□□□ 1.82
LRCH4-208ENST00000490359 NCOA2Q15596 1464 aa26.43■■□□□ 1.82
LRCH4-208ENST00000490359 LRRC9Q6ZRR7 1453 aa26.43■■□□□ 1.82
LRCH4-208ENST00000490359 SUPT6HQ7KZ85 1726 aaKnown RBP26.43■■□□□ 1.82
LRCH4-208ENST00000490359 ITSN2Q9NZM3 1697 aa26.43■■□□□ 1.82
LRCH4-208ENST00000490359 SYCP2Q9BX26 1530 aa26.4■■□□□ 1.82
LRCH4-208ENST00000490359 HNRNPMP52272 730 aaKnown RBP eCLIP26.4■■□□□ 1.82
LRCH4-208ENST00000490359 PLEKHH2Q8IVE3 1493 aa26.4■■□□□ 1.82
LRCH4-208ENST00000490359 ATP10AO60312 1499 aa26.39■■□□□ 1.82
LRCH4-208ENST00000490359 APLP2Q06481 763 aa26.39■■□□□ 1.82
LRCH4-208ENST00000490359 ILDR1Q86SU0 546 aaPredicted RBP26.39■■□□□ 1.82
LRCH4-208ENST00000490359 KANK4Q5T7N3 995 aaPredicted RBP26.38■■□□□ 1.81
LRCH4-208ENST00000490359 KIAA1107Q9UPP5 1409 aa26.38■■□□□ 1.81
LRCH4-208ENST00000490359 MLH3Q9UHC1 1453 aa26.37■■□□□ 1.81
LRCH4-208ENST00000490359 C9orf84Q5VXU9 1444 aa26.37■■□□□ 1.81
LRCH4-208ENST00000490359 ADAMTSL3P82987 1691 aa26.37■■□□□ 1.81
LRCH4-208ENST00000490359 BCORL1Q5H9F3 1711 aa26.36■■□□□ 1.81
LRCH4-208ENST00000490359 ZNF644Q9H582 1327 aaPredicted RBP26.36■■□□□ 1.81
LRCH4-208ENST00000490359 SIGLEC1Q9BZZ2 1709 aa26.32■■□□□ 1.8
LRCH4-208ENST00000490359 DIP2CQ9Y2E4 1556 aa26.32■■□□□ 1.8
LRCH4-208ENST00000490359 SPAG9O60271 1321 aaKnown RBP26.31■■□□□ 1.8
LRCH4-208ENST00000490359 ABCA6Q8N139 1617 aa26.29■■□□□ 1.8
LRCH4-208ENST00000490359 MADDQ8WXG6 1647 aa26.29■■□□□ 1.8
LRCH4-208ENST00000490359 KIDINS220Q9ULH0 1771 aa26.27■■□□□ 1.8
LRCH4-208ENST00000490359 CAMSAP2Q08AD1 1489 aa26.25■■□□□ 1.79
LRCH4-208ENST00000490359 MBD5Q9P267 1494 aa26.25■■□□□ 1.79
LRCH4-208ENST00000490359 REREQ9P2R6 1566 aa26.24■■□□□ 1.79
LRCH4-208ENST00000490359 DMRT2Q9Y5R5 561 aa26.22■■□□□ 1.79
LRCH4-208ENST00000490359 ATP7AQ04656 1500 aa26.22■■□□□ 1.79
LRCH4-208ENST00000490359 RIMS1Q86UR5 1692 aaKnown RBP26.21■■□□□ 1.79
LRCH4-208ENST00000490359 MYOM3Q5VTT5 1437 aa26.21■■□□□ 1.79
LRCH4-208ENST00000490359 INO80Q9ULG1 1556 aaPredicted RBP26.2■■□□□ 1.78
LRCH4-208ENST00000490359 HSPA2P54652 639 aa26.18■■□□□ 1.78
LRCH4-208ENST00000490359 FBXO41Q8TF61 875 aa26.18■■□□□ 1.78
LRCH4-208ENST00000490359 CCDC141Q6ZP82 1450 aa26.17■■□□□ 1.78
LRCH4-208ENST00000490359 AGLP35573 1532 aa26.17■■□□□ 1.78
LRCH4-208ENST00000490359 MIA2Q96PC5 1412 aa26.16■■□□□ 1.78
LRCH4-208ENST00000490359 RSPH4AQ5TD94 716 aa26.16■■□□□ 1.78
LRCH4-208ENST00000490359 FER1L4A9Z1Z3 1794 aa26.14■■□□□ 1.78
LRCH4-208ENST00000490359 LMTK3Q96Q04 1460 aa26.13■■□□□ 1.77
LRCH4-208ENST00000490359 CEBPAP49715 358 aaPredicted RBP26.13■■□□□ 1.77
LRCH4-208ENST00000490359 RTEL1-TNFRSF6BF6WH68 1400 aa26.13■■□□□ 1.77
LRCH4-208ENST00000490359 A2MP01023 1474 aa26.12■■□□□ 1.77
LRCH4-208ENST00000490359 ARHGEF5Q12774 1597 aa26.12■■□□□ 1.77
LRCH4-208ENST00000490359 TSPY4P0CV99 314 aa26.09■■□□□ 1.77
LRCH4-208ENST00000490359 TSPY10P0CW01 314 aa26.09■■□□□ 1.77
LRCH4-208ENST00000490359 CNTLNQ9NXG0 1405 aa26.08■■□□□ 1.77
LRCH4-208ENST00000490359 UHRF1BP1Q6BDS2 1440 aa26.07■■□□□ 1.76
LRCH4-208ENST00000490359 PLXNC1O60486 1568 aa26.07■■□□□ 1.76
LRCH4-208ENST00000490359 ADGBQ8N7X0 1667 aa26.05■■□□□ 1.76
LRCH4-208ENST00000490359 FGD6Q6ZV73 1430 aa26.04■■□□□ 1.76
LRCH4-208ENST00000490359 PTPN23Q9H3S7 1636 aa26.03■■□□□ 1.76
LRCH4-208ENST00000490359 DHX29Q7Z478 1369 aaKnown RBP26.01■■□□□ 1.75
LRCH4-208ENST00000490359 PPP6R1Q9UPN7 881 aa26.01■■□□□ 1.75
LRCH4-208ENST00000490359 GGT6Q6P531 493 aa26■■□□□ 1.75
LRCH4-208ENST00000490359 MAST1Q9Y2H9 1570 aa25.98■■□□□ 1.75
LRCH4-208ENST00000490359 TCOF1Q13428 1488 aaKnown RBP25.97■■□□□ 1.75
LRCH4-208ENST00000490359 CERKQ8TCT0 537 aa25.95■■□□□ 1.74
LRCH4-208ENST00000490359 ABCC5O15440 1437 aa25.94■■□□□ 1.74
LRCH4-208ENST00000490359 KIF3BO15066 747 aa25.93■■□□□ 1.74
LRCH4-208ENST00000490359 DAPK1P53355 1430 aa25.91■■□□□ 1.74
LRCH4-208ENST00000490359 ZMYM3Q14202 1370 aa25.91■■□□□ 1.74
LRCH4-208ENST00000490359 PPARGC1BQ86YN6 1023 aaKnown RBP25.9■■□□□ 1.74
LRCH4-208ENST00000490359 SHANK2Q9UPX8 1470 aa25.9■■□□□ 1.74
LRCH4-208ENST00000490359 PREX1Q8TCU6 1659 aa25.9■■□□□ 1.74
LRCH4-208ENST00000490359 FAM50AQ14320 339 aaKnown RBP25.89■■□□□ 1.74
LRCH4-208ENST00000490359 C3P01024 1663 aa25.89■■□□□ 1.73
LRCH4-208ENST00000490359 DNMT1P26358 1616 aaKnown RBP25.88■■□□□ 1.73
LRCH4-208ENST00000490359 CROCC2H7BZ55 1655 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms