RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 ECM2O94769 699 aaPredicted RBP11.1□□□□□ -0.63
RBM39-235ENST00000490354 NLRP6P59044 892 aa11.09□□□□□ -0.63
RBM39-235ENST00000490354 FBXO22Q8NEZ5 403 aa11.08□□□□□ -0.64
RBM39-235ENST00000490354 STK25O00506 426 aa11.06□□□□□ -0.64
RBM39-235ENST00000490354 RIMBP2O15034 1052 aa11.06□□□□□ -0.64
RBM39-235ENST00000490354 MFRPQ9BY79 579 aa11.06□□□□□ -0.64
RBM39-235ENST00000490354 ERBB3P21860 1342 aa11.06□□□□□ -0.64
RBM39-235ENST00000490354 PKD2Q13563 968 aa11.05□□□□□ -0.64
RBM39-235ENST00000490354 RGL2O15211 777 aa11.04□□□□□ -0.64
RBM39-235ENST00000490354 ZSWIM6Q9HCJ5 1215 aa11.01□□□□□ -0.65
RBM39-235ENST00000490354 GPR153Q6NV75 609 aa11□□□□□ -0.65
RBM39-235ENST00000490354 VARS2Q5ST30 1063 aaKnown RBP10.99□□□□□ -0.65
RBM39-235ENST00000490354 ARSIQ5FYB1 569 aa10.95□□□□□ -0.66
RBM39-235ENST00000490354 C2orf72A6NCS6 295 aa10.92□□□□□ -0.66
RBM39-235ENST00000490354 KIF3CO14782 793 aa10.92□□□□□ -0.66
RBM39-235ENST00000490354 KHSRPQ92945 711 aaKnown RBP eCLIP10.92□□□□□ -0.66
RBM39-235ENST00000490354 ZNF687Q8N1G0 1237 aa10.9□□□□□ -0.66
RBM39-235ENST00000490354 PPP1R37O75864 691 aa10.87□□□□□ -0.67
RBM39-235ENST00000490354 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
RBM39-235ENST00000490354 TMC2Q8TDI7 906 aa10.83□□□□□ -0.68
RBM39-235ENST00000490354 NUDT7P0C024 238 aa10.82□□□□□ -0.68
RBM39-235ENST00000490354 RNF166Q96A37 237 aaPredicted RBP10.8□□□□□ -0.68
RBM39-235ENST00000490354 SLC34A2O95436 690 aa10.79□□□□□ -0.68
RBM39-235ENST00000490354 PCDHGA4Q9Y5G9 962 aa10.79□□□□□ -0.68
RBM39-235ENST00000490354 HS6ST3Q8IZP7 471 aa10.78□□□□□ -0.68
RBM39-235ENST00000490354 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
RBM39-235ENST00000490354 ANKRD13DQ6ZTN6 518 aa10.76□□□□□ -0.69
RBM39-235ENST00000490354 LHX6Q9UPM6 363 aa10.76□□□□□ -0.69
RBM39-235ENST00000490354 CHGAP10645 457 aaKnown RBP10.73□□□□□ -0.69
RBM39-235ENST00000490354 LSM11P83369 360 aaKnown RBP eCLIP10.72□□□□□ -0.696e-15■■□□□ 11.5
RBM39-235ENST00000490354 POTEEQ6S8J3 1075 aa10.71□□□□□ -0.69
RBM39-235ENST00000490354 PTGER2P43116 358 aa10.7□□□□□ -0.7
RBM39-235ENST00000490354 AXIN2Q9Y2T1 843 aa10.7□□□□□ -0.7
RBM39-235ENST00000490354 FOXK1P85037 733 aa10.69□□□□□ -0.7
RBM39-235ENST00000490354 PBX2P40425 430 aa10.68□□□□□ -0.7
RBM39-235ENST00000490354 PLPP6Q8IY26 295 aa10.68□□□□□ -0.7
RBM39-235ENST00000490354 PTCD2Q8WV60 388 aaKnown RBP10.67□□□□□ -0.7
RBM39-235ENST00000490354 GPHNQ9NQX3 736 aaPredicted RBP10.67□□□□□ -0.7
RBM39-235ENST00000490354 NKX1-1Q15270 411 aaPredicted RBP10.66□□□□□ -0.7
RBM39-235ENST00000490354 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
RBM39-235ENST00000490354 DSG2Q14126 1118 aa10.65□□□□□ -0.7
RBM39-235ENST00000490354 DNAJC5Q9H3Z4 198 aa10.63□□□□□ -0.71
RBM39-235ENST00000490354 PSDA5PKW4 1024 aaPredicted RBP10.61□□□□□ -0.71
RBM39-235ENST00000490354 ARHGAP33O14559 1287 aa10.59□□□□□ -0.71
RBM39-235ENST00000490354 TBC1D12O60347 775 aa10.56□□□□□ -0.72
RBM39-235ENST00000490354 ADGRD1Q6QNK2 874 aa10.56□□□□□ -0.72
RBM39-235ENST00000490354 RYDENQ9NUL5 291 aaKnown RBP10.56□□□□□ -0.72
RBM39-235ENST00000490354 PSEN2P49810 448 aa10.55□□□□□ -0.72
RBM39-235ENST00000490354 DMRTA1Q5VZB9 504 aa10.55□□□□□ -0.72
RBM39-235ENST00000490354 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
RBM39-235ENST00000490354 PPP4R3BQ5MIZ7 849 aa10.53□□□□□ -0.72
RBM39-235ENST00000490354 UPF1Q92900 1129 aaKnown RBP eCLIP10.53□□□□□ -0.72
RBM39-235ENST00000490354 OXER1Q8TDS5 423 aa10.52□□□□□ -0.73
RBM39-235ENST00000490354 PPP1R15BQ5SWA1 713 aa10.51□□□□□ -0.73
RBM39-235ENST00000490354 NCKAP5LQ9HCH0 1330 aa10.5□□□□□ -0.73
RBM39-235ENST00000490354 TK2O00142 265 aa10.49□□□□□ -0.73
RBM39-235ENST00000490354 GTPBP6O43824 516 aaPredicted RBP10.49□□□□□ -0.73
RBM39-235ENST00000490354 HRO43593 1189 aa10.48□□□□□ -0.73
RBM39-235ENST00000490354 KCNK17Q96T54 332 aa10.47□□□□□ -0.73
RBM39-235ENST00000490354 PDE4AP27815 886 aa10.46□□□□□ -0.73
RBM39-235ENST00000490354 ZNF454Q8N9F8 522 aa10.45□□□□□ -0.74
RBM39-235ENST00000490354 HCSTQ9UBK5 93 aa10.45□□□□□ -0.74
RBM39-235ENST00000490354 DCAF8L2P0C7V8 631 aa10.43□□□□□ -0.74
RBM39-235ENST00000490354 KCNH8Q96L42 1107 aa10.42□□□□□ -0.74
RBM39-235ENST00000490354 LARP6Q9BRS8 491 aaKnown RBP10.41□□□□□ -0.74
RBM39-235ENST00000490354 DDX27Q96GQ7 796 aaKnown RBP10.4□□□□□ -0.74
RBM39-235ENST00000490354 PLA2G2EQ9NZK7 142 aa10.4□□□□□ -0.74
RBM39-235ENST00000490354 FOSBP53539 338 aa10.39□□□□□ -0.75
RBM39-235ENST00000490354 KCTD12Q96CX2 325 aaKnown RBP10.39□□□□□ -0.75
RBM39-235ENST00000490354 STAC3Q96MF2 364 aa10.39□□□□□ -0.75
RBM39-235ENST00000490354 BCL2L12Q9HB09 334 aa10.39□□□□□ -0.75
RBM39-235ENST00000490354 VPS9D1Q9Y2B5 631 aa10.39□□□□□ -0.75
RBM39-235ENST00000490354 EVI5O60447 810 aa10.38□□□□□ -0.75
RBM39-235ENST00000490354 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
RBM39-235ENST00000490354 MFSD10Q14728 455 aa10.36□□□□□ -0.75
RBM39-235ENST00000490354 JPH4Q96JJ6 628 aa10.35□□□□□ -0.75
RBM39-235ENST00000490354 PTPREP23469 700 aa10.34□□□□□ -0.75
RBM39-235ENST00000490354 MAP3K9P80192 1104 aa10.34□□□□□ -0.75
RBM39-235ENST00000490354 CADPS2Q86UW7 1296 aa10.33□□□□□ -0.76
RBM39-235ENST00000490354 SLC4A5Q9BY07 1137 aa10.33□□□□□ -0.76
RBM39-235ENST00000490354 ADAM33Q9BZ11 813 aa10.33□□□□□ -0.76
RBM39-235ENST00000490354 EMILIN3Q9NT22 766 aa10.33□□□□□ -0.76
RBM39-235ENST00000490354 ZDHHC16Q969W1 377 aa10.32□□□□□ -0.76
RBM39-235ENST00000490354 ZBED2Q9BTP6 218 aa10.31□□□□□ -0.76
RBM39-235ENST00000490354 BHMG1C9JSJ3 638 aaPredicted RBP10.3□□□□□ -0.76
RBM39-235ENST00000490354 PTPN5P54829 565 aa10.29□□□□□ -0.76
RBM39-235ENST00000490354 PCDHGA10Q9Y5H3 936 aa10.26□□□□□ -0.77
RBM39-235ENST00000490354 THSD4Q6ZMP0 1018 aa10.24□□□□□ -0.77
RBM39-235ENST00000490354 MRPL50Q8N5N7 158 aaKnown RBP10.24□□□□□ -0.77
RBM39-235ENST00000490354 GOLGA8CPA6NN73 597 aa10.23□□□□□ -0.77
RBM39-235ENST00000490354 WNT2BQ93097 391 aa10.22□□□□□ -0.77
RBM39-235ENST00000490354 PPP1R3GB7ZBB8 358 aa10.21□□□□□ -0.77
RBM39-235ENST00000490354 NBPF3Q9H094 633 aa10.21□□□□□ -0.77
RBM39-235ENST00000490354 PHF14O94880 888 aa10.2□□□□□ -0.78
RBM39-235ENST00000490354 COL9A1P20849 921 aa10.2□□□□□ -0.78
RBM39-235ENST00000490354 CAMK2BQ13554 666 aa10.2□□□□□ -0.78
RBM39-235ENST00000490354 PROX2Q3B8N5 592 aa10.2□□□□□ -0.78
RBM39-235ENST00000490354 TYW1BQ6NUM6 668 aa10.19□□□□□ -0.78
RBM39-235ENST00000490354 DPYSL4O14531 572 aa10.18□□□□□ -0.78
RBM39-235ENST00000490354 NISCHQ9Y2I1 1504 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms