RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 TROQ12816 1431 aaPredicted RBP25.74■■□□□ 1.71
NUP58-213ENST00000490231 EFCAB2Q5VUJ9 269 aa25.74■■□□□ 1.71
NUP58-213ENST00000490231 KIF14Q15058 1648 aa25.71■■□□□ 1.71
NUP58-213ENST00000490231 MYO5CQ9NQX4 1742 aa25.71■■□□□ 1.71
NUP58-213ENST00000490231 CLIP1P30622 1438 aa25.71■■□□□ 1.71
NUP58-213ENST00000490231 RIMS1Q86UR5 1692 aaKnown RBP25.66■■□□□ 1.7
NUP58-213ENST00000490231 PCF11O94913 1555 aaKnown RBP25.65■■□□□ 1.7
NUP58-213ENST00000490231 CASKIN1Q8WXD9 1431 aa25.65■■□□□ 1.7
NUP58-213ENST00000490231 SIGLEC1Q9BZZ2 1709 aa25.65■■□□□ 1.7
NUP58-213ENST00000490231 LRRIQ1Q96JM4 1722 aa25.64■■□□□ 1.7
NUP58-213ENST00000490231 ARHGAP5Q13017 1502 aa25.63■■□□□ 1.69
NUP58-213ENST00000490231 ATP10AO60312 1499 aa25.63■■□□□ 1.69
NUP58-213ENST00000490231 CCDC18Q5T9S5 1454 aa25.63■■□□□ 1.69
NUP58-213ENST00000490231 ZNF518AQ6AHZ1 1483 aa25.63■■□□□ 1.69
NUP58-213ENST00000490231 LMTK3Q96Q04 1460 aa25.63■■□□□ 1.69
NUP58-213ENST00000490231 C9orf84Q5VXU9 1444 aa25.61■■□□□ 1.69
NUP58-213ENST00000490231 KDM5CP41229 1560 aa25.57■■□□□ 1.68
NUP58-213ENST00000490231 MLECQ14165 292 aa25.57■■□□□ 1.68
NUP58-213ENST00000490231 AFAP1Q8N556 730 aa25.56■■□□□ 1.68
NUP58-213ENST00000490231 FYCO1Q9BQS8 1478 aa25.54■■□□□ 1.68
NUP58-213ENST00000490231 ARHGEF12Q9NZN5 1544 aa25.54■■□□□ 1.68
NUP58-213ENST00000490231 CDC42BPBQ9Y5S2 1711 aa25.52■■□□□ 1.68
NUP58-213ENST00000490231 PREX2Q70Z35 1606 aa25.52■■□□□ 1.68
NUP58-213ENST00000490231 FER1L4A9Z1Z3 1794 aa25.51■■□□□ 1.67
NUP58-213ENST00000490231 PLPPR3Q6T4P5 718 aa25.5■■□□□ 1.67
NUP58-213ENST00000490231 MLH3Q9UHC1 1453 aa25.49■■□□□ 1.67
NUP58-213ENST00000490231 ABCC1P33527 1531 aa25.48■■□□□ 1.67
NUP58-213ENST00000490231 REREQ9P2R6 1566 aa25.48■■□□□ 1.67
NUP58-213ENST00000490231 MYT1LQ9UL68 1186 aa25.47■■□□□ 1.67
NUP58-213ENST00000490231 DIP2CQ9Y2E4 1556 aa25.47■■□□□ 1.67
NUP58-213ENST00000490231 TRAPPC8Q9Y2L5 1435 aa25.46■■□□□ 1.67
NUP58-213ENST00000490231 HSPA2P54652 639 aa25.45■■□□□ 1.66
NUP58-213ENST00000490231 FBXO41Q8TF61 875 aa25.44■■□□□ 1.66
NUP58-213ENST00000490231 ABCA6Q8N139 1617 aa25.41■■□□□ 1.66
NUP58-213ENST00000490231 ITSN2Q9NZM3 1697 aa25.41■■□□□ 1.66
NUP58-213ENST00000490231 CDC42BPAQ5VT25 1732 aa25.4■■□□□ 1.66
NUP58-213ENST00000490231 AGLP35573 1532 aa25.38■■□□□ 1.65
NUP58-213ENST00000490231 GPATCH8Q9UKJ3 1502 aaKnown RBP25.37■■□□□ 1.65
NUP58-213ENST00000490231 CEBPAP49715 358 aaPredicted RBP25.37■■□□□ 1.65
NUP58-213ENST00000490231 PREX1Q8TCU6 1659 aa25.34■■□□□ 1.65
NUP58-213ENST00000490231 SAMD9LQ8IVG5 1584 aa25.33■■□□□ 1.65
NUP58-213ENST00000490231 ZNF777Q9ULD5 760 aaPredicted RBP25.33■■□□□ 1.65
NUP58-213ENST00000490231 KIDINS220Q9ULH0 1771 aa25.33■■□□□ 1.65
NUP58-213ENST00000490231 SYCP2Q9BX26 1530 aa25.3■■□□□ 1.64
NUP58-213ENST00000490231 KIAA1107Q9UPP5 1409 aa25.29■■□□□ 1.64
NUP58-213ENST00000490231 MTUS2Q5JR59 1369 aa25.29■■□□□ 1.64
NUP58-213ENST00000490231 UHRF1BP1Q6BDS2 1440 aa25.29■■□□□ 1.64
NUP58-213ENST00000490231 PLEKHH2Q8IVE3 1493 aa25.28■■□□□ 1.64
NUP58-213ENST00000490231 ESF1Q9H501 851 aaKnown RBP25.28■■□□□ 1.64
NUP58-213ENST00000490231 CFDP1Q9UEE9 299 aaPredicted RBP25.28■■□□□ 1.64
NUP58-213ENST00000490231 CCNB3Q8WWL7 1395 aa25.28■■□□□ 1.64
NUP58-213ENST00000490231 SPAG9O60271 1321 aaKnown RBP25.27■■□□□ 1.64
NUP58-213ENST00000490231 HNRNPMP52272 730 aaKnown RBP eCLIP25.26■■□□□ 1.63
NUP58-213ENST00000490231 CNTLNQ9NXG0 1405 aa25.25■■□□□ 1.63
NUP58-213ENST00000490231 C3P01024 1663 aa25.23■■□□□ 1.63
NUP58-213ENST00000490231 ATP7AQ04656 1500 aa25.21■■□□□ 1.63
NUP58-213ENST00000490231 CEP162Q5TB80 1403 aa25.2■■□□□ 1.63
NUP58-213ENST00000490231 DMRT2Q9Y5R5 561 aa25.2■■□□□ 1.62
NUP58-213ENST00000490231 EHBP1L1Q8N3D4 1523 aa25.2■■□□□ 1.62
NUP58-213ENST00000490231 CERKQ8TCT0 537 aa25.19■■□□□ 1.62
NUP58-213ENST00000490231 INO80Q9ULG1 1556 aaPredicted RBP25.18■■□□□ 1.62
NUP58-213ENST00000490231 SETD1BQ9UPS6 1966 aaKnown RBP25.18■■□□□ 1.62
NUP58-213ENST00000490231 TIAM1Q13009 1591 aa25.17■■□□□ 1.62
NUP58-213ENST00000490231 A2MP01023 1474 aa25.15■■□□□ 1.62
NUP58-213ENST00000490231 PLXNC1O60486 1568 aa25.15■■□□□ 1.62
NUP58-213ENST00000490231 STRCQ7RTU9 1775 aa25.14■■□□□ 1.62
NUP58-213ENST00000490231 NPATQ14207 1427 aa25.13■■□□□ 1.61
NUP58-213ENST00000490231 MROH2AA6NES4 1674 aa25.13■■□□□ 1.61
NUP58-213ENST00000490231 MBD5Q9P267 1494 aa25.12■■□□□ 1.61
NUP58-213ENST00000490231 ZNF644Q9H582 1327 aaPredicted RBP25.12■■□□□ 1.61
NUP58-213ENST00000490231 ZMYM3Q14202 1370 aa25.11■■□□□ 1.61
NUP58-213ENST00000490231 SUPT6HQ7KZ85 1726 aaKnown RBP25.11■■□□□ 1.61
NUP58-213ENST00000490231 PTPRTO14522 1441 aa25.09■■□□□ 1.61
NUP58-213ENST00000490231 RTEL1-TNFRSF6BF6WH68 1400 aa25.08■■□□□ 1.61
NUP58-213ENST00000490231 PPP6R1Q9UPN7 881 aa25.06■■□□□ 1.6
NUP58-213ENST00000490231 ADGBQ8N7X0 1667 aa25.05■■□□□ 1.6
NUP58-213ENST00000490231 NCOA2Q15596 1464 aa25.04■■□□□ 1.6
NUP58-213ENST00000490231 GGT6Q6P531 493 aa25.04■■□□□ 1.6
NUP58-213ENST00000490231 NCOA1Q15788 1441 aa25.03■■□□□ 1.6
NUP58-213ENST00000490231 CLTCQ00610 1675 aaKnown RBP25.02■■□□□ 1.6
NUP58-213ENST00000490231 DHX29Q7Z478 1369 aaKnown RBP25.01■■□□□ 1.59
NUP58-213ENST00000490231 RSPH4AQ5TD94 716 aa25■■□□□ 1.59
NUP58-213ENST00000490231 PTPRKQ15262 1439 aa24.99■■□□□ 1.59
NUP58-213ENST00000490231 CCDC141Q6ZP82 1450 aa24.99■■□□□ 1.59
NUP58-213ENST00000490231 CAMSAP2Q08AD1 1489 aa24.98■■□□□ 1.59
NUP58-213ENST00000490231 CAMSAP1Q5T5Y3 1602 aa24.97■■□□□ 1.59
NUP58-213ENST00000490231 VPS8Q8N3P4 1428 aa24.96■■□□□ 1.59
NUP58-213ENST00000490231 MYO3AQ8NEV4 1616 aa24.94■■□□□ 1.58
NUP58-213ENST00000490231 ZNF142P52746 1687 aaPredicted RBP24.93■■□□□ 1.58
NUP58-213ENST00000490231 LRRC9Q6ZRR7 1453 aa24.92■■□□□ 1.58
NUP58-213ENST00000490231 PLA2R1Q13018 1463 aa24.91■■□□□ 1.58
NUP58-213ENST00000490231 LTBP4Q8N2S1 1624 aa24.91■■□□□ 1.58
NUP58-213ENST00000490231 LOC105371045A0A1W2PR82 267 aa24.91■■□□□ 1.58
NUP58-213ENST00000490231 CEP170BQ9Y4F5 1589 aaPredicted RBP24.91■■□□□ 1.58
NUP58-213ENST00000490231 ARHGEF5Q12774 1597 aa24.9■■□□□ 1.58
NUP58-213ENST00000490231 KIF3BO15066 747 aa24.89■■□□□ 1.58
NUP58-213ENST00000490231 FAM135AQ9P2D6 1515 aa24.89■■□□□ 1.57
NUP58-213ENST00000490231 PKD2Q13563 968 aa24.88■■□□□ 1.57
NUP58-213ENST00000490231 NCKAP5LQ9HCH0 1330 aa24.87■■□□□ 1.57
NUP58-213ENST00000490231 TSPY4P0CV99 314 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms