RNA–Protein interactions for RNA: ENST00000490127.5

RBM3-209, Transcript of RNA binding motif protein 3, humanhuman

TSL 5

Gene RBM3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-209ENST00000490127 ZFYVE16Q7Z3T8 1539 aa18.48■□□□□ 0.55
RBM3-209ENST00000490127 SCAPERQ9BY12 1400 aa18.48■□□□□ 0.55
RBM3-209ENST00000490127 YEATS2Q9ULM3 1422 aa18.48■□□□□ 0.55
RBM3-209ENST00000490127 LMTK3Q96Q04 1460 aa18.47■□□□□ 0.55
RBM3-209ENST00000490127 EFCAB2Q5VUJ9 269 aa18.47■□□□□ 0.55
RBM3-209ENST00000490127 FMN1Q68DA7 1419 aa18.46■□□□□ 0.55
RBM3-209ENST00000490127 HSPA2P54652 639 aa18.44■□□□□ 0.54
RBM3-209ENST00000490127 HECW1Q76N89 1606 aa18.44■□□□□ 0.54
RBM3-209ENST00000490127 ATP10AO60312 1499 aa18.39■□□□□ 0.54
RBM3-209ENST00000490127 SIGLEC1Q9BZZ2 1709 aa18.38■□□□□ 0.53
RBM3-209ENST00000490127 MYT1LQ9UL68 1186 aa18.38■□□□□ 0.53
RBM3-209ENST00000490127 MYO5CQ9NQX4 1742 aa18.37■□□□□ 0.53
RBM3-209ENST00000490127 C9orf84Q5VXU9 1444 aa18.36■□□□□ 0.53
RBM3-209ENST00000490127 CLIP1P30622 1438 aa18.35■□□□□ 0.53
RBM3-209ENST00000490127 TROQ12816 1431 aaPredicted RBP18.35■□□□□ 0.53
RBM3-209ENST00000490127 AFAP1Q8N556 730 aa18.35■□□□□ 0.53
RBM3-209ENST00000490127 FER1L4A9Z1Z3 1794 aa18.35■□□□□ 0.53
RBM3-209ENST00000490127 KIF14Q15058 1648 aa18.33■□□□□ 0.52
RBM3-209ENST00000490127 ARHGAP5Q13017 1502 aa18.33■□□□□ 0.52
RBM3-209ENST00000490127 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.52
RBM3-209ENST00000490127 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
RBM3-209ENST00000490127 ARHGEF12Q9NZN5 1544 aa18.32■□□□□ 0.52
RBM3-209ENST00000490127 CERKQ8TCT0 537 aa18.3■□□□□ 0.52
RBM3-209ENST00000490127 CASKIN1Q8WXD9 1431 aa18.26■□□□□ 0.51
RBM3-209ENST00000490127 LRRIQ1Q96JM4 1722 aa18.26■□□□□ 0.51
RBM3-209ENST00000490127 KDM5CP41229 1560 aa18.25■□□□□ 0.51
RBM3-209ENST00000490127 ESF1Q9H501 851 aaKnown RBP18.25■□□□□ 0.51
RBM3-209ENST00000490127 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
RBM3-209ENST00000490127 FYCO1Q9BQS8 1478 aa18.24■□□□□ 0.51
RBM3-209ENST00000490127 PREX1Q8TCU6 1659 aa18.23■□□□□ 0.51
RBM3-209ENST00000490127 CCDC18Q5T9S5 1454 aa18.23■□□□□ 0.51
RBM3-209ENST00000490127 MLH3Q9UHC1 1453 aa18.22■□□□□ 0.51
RBM3-209ENST00000490127 CDC42BPBQ9Y5S2 1711 aa18.22■□□□□ 0.51
RBM3-209ENST00000490127 SETD1BQ9UPS6 1966 aaKnown RBP18.22■□□□□ 0.51
RBM3-209ENST00000490127 CEP162Q5TB80 1403 aa18.21■□□□□ 0.51
RBM3-209ENST00000490127 UHRF1BP1Q6BDS2 1440 aa18.21■□□□□ 0.51
RBM3-209ENST00000490127 TRAPPC8Q9Y2L5 1435 aa18.21■□□□□ 0.51
RBM3-209ENST00000490127 DIP2CQ9Y2E4 1556 aa18.21■□□□□ 0.51
RBM3-209ENST00000490127 REREQ9P2R6 1566 aa18.19■□□□□ 0.5
RBM3-209ENST00000490127 ZNF777Q9ULD5 760 aaPredicted RBP18.18■□□□□ 0.5
RBM3-209ENST00000490127 PREX2Q70Z35 1606 aa18.17■□□□□ 0.5
RBM3-209ENST00000490127 ABCC1P33527 1531 aa18.17■□□□□ 0.5
RBM3-209ENST00000490127 ABCA6Q8N139 1617 aa18.16■□□□□ 0.5
RBM3-209ENST00000490127 AGLP35573 1532 aa18.16■□□□□ 0.5
RBM3-209ENST00000490127 ITSN2Q9NZM3 1697 aa18.14■□□□□ 0.49
RBM3-209ENST00000490127 STRCQ7RTU9 1775 aa18.13■□□□□ 0.49
RBM3-209ENST00000490127 CNTLNQ9NXG0 1405 aa18.12■□□□□ 0.49
RBM3-209ENST00000490127 C3P01024 1663 aa18.12■□□□□ 0.49
RBM3-209ENST00000490127 HNRNPMP52272 730 aaKnown RBP eCLIP18.11■□□□□ 0.49
RBM3-209ENST00000490127 SPAG9O60271 1321 aaKnown RBP18.11■□□□□ 0.49
RBM3-209ENST00000490127 CDC42BPAQ5VT25 1732 aa18.11■□□□□ 0.49
RBM3-209ENST00000490127 KIDINS220Q9ULH0 1771 aa18.11■□□□□ 0.49
RBM3-209ENST00000490127 PTPRTO14522 1441 aa18.09■□□□□ 0.49
RBM3-209ENST00000490127 CFDP1Q9UEE9 299 aaPredicted RBP18.08■□□□□ 0.48
RBM3-209ENST00000490127 SAMD9LQ8IVG5 1584 aa18.08■□□□□ 0.48
RBM3-209ENST00000490127 GPATCH8Q9UKJ3 1502 aaKnown RBP18.08■□□□□ 0.48
RBM3-209ENST00000490127 LOC105371045A0A1W2PR82 267 aa18.07■□□□□ 0.48
RBM3-209ENST00000490127 CCNB3Q8WWL7 1395 aa18.05■□□□□ 0.48
RBM3-209ENST00000490127 ZMYM3Q14202 1370 aa18.04■□□□□ 0.48
RBM3-209ENST00000490127 SYCP2Q9BX26 1530 aa18.04■□□□□ 0.48
RBM3-209ENST00000490127 KIAA1107Q9UPP5 1409 aa18.04■□□□□ 0.48
RBM3-209ENST00000490127 PLEKHH2Q8IVE3 1493 aa18.03■□□□□ 0.48
RBM3-209ENST00000490127 NPATQ14207 1427 aa18.02■□□□□ 0.48
RBM3-209ENST00000490127 MTUS2Q5JR59 1369 aa18.02■□□□□ 0.47
RBM3-209ENST00000490127 NCOA1Q15788 1441 aa18.01■□□□□ 0.47
RBM3-209ENST00000490127 GGT6Q6P531 493 aa18.01■□□□□ 0.47
RBM3-209ENST00000490127 EHBP1L1Q8N3D4 1523 aa18.01■□□□□ 0.47
RBM3-209ENST00000490127 SUPT6HQ7KZ85 1726 aaKnown RBP18.01■□□□□ 0.47
RBM3-209ENST00000490127 VPS8Q8N3P4 1428 aa18■□□□□ 0.47
RBM3-209ENST00000490127 ATP7AQ04656 1500 aa17.99■□□□□ 0.47
RBM3-209ENST00000490127 DISP3Q9P2K9 1392 aa17.99■□□□□ 0.47
RBM3-209ENST00000490127 A2MP01023 1474 aa17.99■□□□□ 0.47
RBM3-209ENST00000490127 MROH2AA6NES4 1674 aa17.99■□□□□ 0.47
RBM3-209ENST00000490127 NCKAP5LQ9HCH0 1330 aa17.98■□□□□ 0.47
RBM3-209ENST00000490127 PPP6R1Q9UPN7 881 aa17.97■□□□□ 0.47
RBM3-209ENST00000490127 CAMSAP1Q5T5Y3 1602 aa17.97■□□□□ 0.47
RBM3-209ENST00000490127 LTBP4Q8N2S1 1624 aa17.96■□□□□ 0.47
RBM3-209ENST00000490127 TIAM1Q13009 1591 aa17.96■□□□□ 0.46
RBM3-209ENST00000490127 ZNF644Q9H582 1327 aaPredicted RBP17.95■□□□□ 0.46
RBM3-209ENST00000490127 CLTCQ00610 1675 aaKnown RBP17.94■□□□□ 0.46
RBM3-209ENST00000490127 PKD2Q13563 968 aa17.94■□□□□ 0.46
RBM3-209ENST00000490127 INO80Q9ULG1 1556 aaPredicted RBP17.94■□□□□ 0.46
RBM3-209ENST00000490127 PLXNC1O60486 1568 aa17.93■□□□□ 0.46
RBM3-209ENST00000490127 IQSEC2Q5JU85 1478 aa17.93■□□□□ 0.46
RBM3-209ENST00000490127 PTPRKQ15262 1439 aa17.92■□□□□ 0.46
RBM3-209ENST00000490127 ILDR2Q71H61 639 aa17.9■□□□□ 0.46
RBM3-209ENST00000490127 ZNF335Q9H4Z2 1342 aaPredicted RBP17.9■□□□□ 0.46
RBM3-209ENST00000490127 ADGBQ8N7X0 1667 aa17.89■□□□□ 0.45
RBM3-209ENST00000490127 RTEL1-TNFRSF6BF6WH68 1400 aa17.89■□□□□ 0.45
RBM3-209ENST00000490127 PLA2R1Q13018 1463 aa17.88■□□□□ 0.45
RBM3-209ENST00000490127 MBD5Q9P267 1494 aa17.88■□□□□ 0.45
RBM3-209ENST00000490127 DHX29Q7Z478 1369 aaKnown RBP17.88■□□□□ 0.45
RBM3-209ENST00000490127 UBAP1LF5GYI3 381 aa17.87■□□□□ 0.45
RBM3-209ENST00000490127 MAP3K1Q13233 1512 aa17.87■□□□□ 0.45
RBM3-209ENST00000490127 CEP170BQ9Y4F5 1589 aaPredicted RBP17.87■□□□□ 0.45
RBM3-209ENST00000490127 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
RBM3-209ENST00000490127 KIF3BO15066 747 aa17.86■□□□□ 0.45
RBM3-209ENST00000490127 RSPH4AQ5TD94 716 aa17.86■□□□□ 0.45
RBM3-209ENST00000490127 NCOA2Q15596 1464 aa17.86■□□□□ 0.45
RBM3-209ENST00000490127 ZNF142P52746 1687 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms