RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 RAPGEF3O95398 923 aa17.77■□□□□ 0.44
UBP1-211ENST00000490112 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
UBP1-211ENST00000490112 CFAP74Q9C0B2 1584 aa17.74■□□□□ 0.43
UBP1-211ENST00000490112 ILDR1Q86SU0 546 aaPredicted RBP17.73■□□□□ 0.43
UBP1-211ENST00000490112 DENND4BO75064 1496 aaPredicted RBP17.71■□□□□ 0.43
UBP1-211ENST00000490112 AKNAQ7Z591 1439 aa17.7■□□□□ 0.42
UBP1-211ENST00000490112 ADAMTSL3P82987 1691 aa17.7■□□□□ 0.42
UBP1-211ENST00000490112 FRMPD1Q5SYB0 1578 aa17.7■□□□□ 0.42
UBP1-211ENST00000490112 ARID4BQ4LE39 1312 aaPredicted RBP17.7■□□□□ 0.42
UBP1-211ENST00000490112 FANCAO15360 1455 aa17.69■□□□□ 0.42
UBP1-211ENST00000490112 PTPRMP28827 1452 aa17.69■□□□□ 0.42
UBP1-211ENST00000490112 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.68■□□□□ 0.42
UBP1-211ENST00000490112 UBTFP17480 764 aaKnown RBP17.68■□□□□ 0.42
UBP1-211ENST00000490112 FMN1Q68DA7 1419 aa17.67■□□□□ 0.42
UBP1-211ENST00000490112 BCORL1Q5H9F3 1711 aa17.67■□□□□ 0.42
UBP1-211ENST00000490112 RICTORQ6R327 1708 aa17.66■□□□□ 0.42
UBP1-211ENST00000490112 CDK11AQ9UQ88 783 aaPredicted RBP17.65■□□□□ 0.42
UBP1-211ENST00000490112 ARHGEF40Q8TER5 1519 aa17.65■□□□□ 0.42
UBP1-211ENST00000490112 MAGI2Q86UL8 1455 aa17.63■□□□□ 0.41
UBP1-211ENST00000490112 TTC37Q6PGP7 1564 aa17.63■□□□□ 0.41
UBP1-211ENST00000490112 ABCB7O75027 752 aa17.63■□□□□ 0.41
UBP1-211ENST00000490112 POGZQ7Z3K3 1410 aa17.63■□□□□ 0.41
UBP1-211ENST00000490112 CDK13Q14004 1512 aaKnown RBP17.62■□□□□ 0.41
UBP1-211ENST00000490112 ZMYM4Q5VZL5 1548 aa17.62■□□□□ 0.41
UBP1-211ENST00000490112 HECW1Q76N89 1606 aa17.61■□□□□ 0.41
UBP1-211ENST00000490112 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
UBP1-211ENST00000490112 PLCH2O75038 1416 aa17.61■□□□□ 0.41
UBP1-211ENST00000490112 MADDQ8WXG6 1647 aa17.61■□□□□ 0.41
UBP1-211ENST00000490112 ZFYVE16Q7Z3T8 1539 aa17.58■□□□□ 0.41
UBP1-211ENST00000490112 EFCAB2Q5VUJ9 269 aa17.58■□□□□ 0.4
UBP1-211ENST00000490112 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
UBP1-211ENST00000490112 SCAPERQ9BY12 1400 aa17.56■□□□□ 0.4
UBP1-211ENST00000490112 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
UBP1-211ENST00000490112 PCF11O94913 1555 aaKnown RBP17.55■□□□□ 0.4
UBP1-211ENST00000490112 MYO5CQ9NQX4 1742 aa17.55■□□□□ 0.4
UBP1-211ENST00000490112 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
UBP1-211ENST00000490112 RIMS1Q86UR5 1692 aaKnown RBP17.54■□□□□ 0.4
UBP1-211ENST00000490112 CLIP1P30622 1438 aa17.54■□□□□ 0.4
UBP1-211ENST00000490112 KIF14Q15058 1648 aa17.53■□□□□ 0.4
UBP1-211ENST00000490112 YEATS2Q9ULM3 1422 aa17.53■□□□□ 0.4
UBP1-211ENST00000490112 TROQ12816 1431 aaPredicted RBP17.52■□□□□ 0.4
UBP1-211ENST00000490112 LMTK3Q96Q04 1460 aa17.5■□□□□ 0.39
UBP1-211ENST00000490112 ATP10AO60312 1499 aa17.5■□□□□ 0.39
UBP1-211ENST00000490112 FBXO41Q8TF61 875 aa17.49■□□□□ 0.39
UBP1-211ENST00000490112 ZNF518AQ6AHZ1 1483 aa17.49■□□□□ 0.39
UBP1-211ENST00000490112 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
UBP1-211ENST00000490112 ARHGAP5Q13017 1502 aa17.47■□□□□ 0.39
UBP1-211ENST00000490112 MLECQ14165 292 aa17.46■□□□□ 0.39
UBP1-211ENST00000490112 FER1L4A9Z1Z3 1794 aa17.45■□□□□ 0.38
UBP1-211ENST00000490112 CCDC18Q5T9S5 1454 aa17.45■□□□□ 0.38
UBP1-211ENST00000490112 SIGLEC1Q9BZZ2 1709 aa17.44■□□□□ 0.38
UBP1-211ENST00000490112 CASKIN1Q8WXD9 1431 aa17.44■□□□□ 0.38
UBP1-211ENST00000490112 ARHGEF12Q9NZN5 1544 aa17.42■□□□□ 0.38
UBP1-211ENST00000490112 KDM5CP41229 1560 aa17.42■□□□□ 0.38
UBP1-211ENST00000490112 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
UBP1-211ENST00000490112 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
UBP1-211ENST00000490112 LRRIQ1Q96JM4 1722 aa17.41■□□□□ 0.38
UBP1-211ENST00000490112 CDC42BPBQ9Y5S2 1711 aa17.38■□□□□ 0.37
UBP1-211ENST00000490112 MLH3Q9UHC1 1453 aa17.38■□□□□ 0.37
UBP1-211ENST00000490112 REREQ9P2R6 1566 aa17.38■□□□□ 0.37
UBP1-211ENST00000490112 HSPA2P54652 639 aa17.38■□□□□ 0.37
UBP1-211ENST00000490112 PREX2Q70Z35 1606 aa17.37■□□□□ 0.37
UBP1-211ENST00000490112 FYCO1Q9BQS8 1478 aa17.37■□□□□ 0.37
UBP1-211ENST00000490112 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
UBP1-211ENST00000490112 PREX1Q8TCU6 1659 aa17.35■□□□□ 0.37
UBP1-211ENST00000490112 ABCC1P33527 1531 aa17.34■□□□□ 0.37
UBP1-211ENST00000490112 DIP2CQ9Y2E4 1556 aa17.34■□□□□ 0.37
UBP1-211ENST00000490112 ESF1Q9H501 851 aaKnown RBP17.33■□□□□ 0.36
UBP1-211ENST00000490112 SETD1BQ9UPS6 1966 aaKnown RBP17.32■□□□□ 0.36
UBP1-211ENST00000490112 AGLP35573 1532 aa17.31■□□□□ 0.36
UBP1-211ENST00000490112 ITSN2Q9NZM3 1697 aa17.31■□□□□ 0.36
UBP1-211ENST00000490112 TRAPPC8Q9Y2L5 1435 aa17.3■□□□□ 0.36
UBP1-211ENST00000490112 CDC42BPAQ5VT25 1732 aa17.3■□□□□ 0.36
UBP1-211ENST00000490112 ABCA6Q8N139 1617 aa17.3■□□□□ 0.36
UBP1-211ENST00000490112 CEBPAP49715 358 aaPredicted RBP17.3■□□□□ 0.36
UBP1-211ENST00000490112 UHRF1BP1Q6BDS2 1440 aa17.3■□□□□ 0.36
UBP1-211ENST00000490112 CERKQ8TCT0 537 aa17.26■□□□□ 0.35
UBP1-211ENST00000490112 ZNF777Q9ULD5 760 aaPredicted RBP17.26■□□□□ 0.35
UBP1-211ENST00000490112 CNTLNQ9NXG0 1405 aa17.26■□□□□ 0.35
UBP1-211ENST00000490112 KIDINS220Q9ULH0 1771 aa17.25■□□□□ 0.35
UBP1-211ENST00000490112 GPATCH8Q9UKJ3 1502 aaKnown RBP17.25■□□□□ 0.35
UBP1-211ENST00000490112 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
UBP1-211ENST00000490112 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
UBP1-211ENST00000490112 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
UBP1-211ENST00000490112 SPAG9O60271 1321 aaKnown RBP17.23■□□□□ 0.35
UBP1-211ENST00000490112 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
UBP1-211ENST00000490112 CFDP1Q9UEE9 299 aaPredicted RBP17.23■□□□□ 0.35
UBP1-211ENST00000490112 C3P01024 1663 aa17.23■□□□□ 0.35
UBP1-211ENST00000490112 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
UBP1-211ENST00000490112 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.35
UBP1-211ENST00000490112 SYCP2Q9BX26 1530 aa17.21■□□□□ 0.34
UBP1-211ENST00000490112 HNRNPMP52272 730 aaKnown RBP eCLIP17.2■□□□□ 0.34
UBP1-211ENST00000490112 STRCQ7RTU9 1775 aa17.19■□□□□ 0.34
UBP1-211ENST00000490112 ATP7AQ04656 1500 aa17.17■□□□□ 0.34
UBP1-211ENST00000490112 MROH2AA6NES4 1674 aa17.17■□□□□ 0.34
UBP1-211ENST00000490112 PTPRTO14522 1441 aa17.17■□□□□ 0.34
UBP1-211ENST00000490112 NPATQ14207 1427 aa17.17■□□□□ 0.34
UBP1-211ENST00000490112 POLA2Q14181 598 aa17.16■□□□□ 0.34
UBP1-211ENST00000490112 INO80Q9ULG1 1556 aaPredicted RBP17.14■□□□□ 0.33
UBP1-211ENST00000490112 ZMYM3Q14202 1370 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms