RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 ZFYVE16Q7Z3T8 1539 aa28.59■■■□□ 2.17
SRM-206ENST00000490101 VPS8Q8N3P4 1428 aa28.59■■■□□ 2.17
SRM-206ENST00000490101 LRRIQ1Q96JM4 1722 aa28.58■■■□□ 2.17
SRM-206ENST00000490101 YEATS2Q9ULM3 1422 aa28.58■■■□□ 2.17
SRM-206ENST00000490101 TROQ12816 1431 aaPredicted RBP28.56■■■□□ 2.16
SRM-206ENST00000490101 POGZQ7Z3K3 1410 aa28.55■■■□□ 2.16
SRM-206ENST00000490101 EFCAB2Q5VUJ9 269 aa28.54■■■□□ 2.16
SRM-206ENST00000490101 RIMS1Q86UR5 1692 aaKnown RBP28.53■■■□□ 2.16
SRM-206ENST00000490101 PCF11O94913 1555 aaKnown RBP28.53■■■□□ 2.16
SRM-206ENST00000490101 ILDR1Q86SU0 546 aaPredicted RBP28.52■■■□□ 2.16
SRM-206ENST00000490101 MAGI2Q86UL8 1455 aa28.52■■■□□ 2.16
SRM-206ENST00000490101 SIGLEC1Q9BZZ2 1709 aa28.5■■■□□ 2.15
SRM-206ENST00000490101 ARHGAP5Q13017 1502 aa28.49■■■□□ 2.15
SRM-206ENST00000490101 CASKIN1Q8WXD9 1431 aa28.48■■■□□ 2.15
SRM-206ENST00000490101 MLECQ14165 292 aa28.47■■■□□ 2.15
SRM-206ENST00000490101 PLPPR3Q6T4P5 718 aa28.47■■■□□ 2.15
SRM-206ENST00000490101 CCDC18Q5T9S5 1454 aa28.45■■■□□ 2.14
SRM-206ENST00000490101 ATP10AO60312 1499 aa28.4■■■□□ 2.14
SRM-206ENST00000490101 ZNF518AQ6AHZ1 1483 aa28.4■■■□□ 2.14
SRM-206ENST00000490101 CDC42BPBQ9Y5S2 1711 aa28.38■■■□□ 2.13
SRM-206ENST00000490101 AFAP1Q8N556 730 aa28.38■■■□□ 2.13
SRM-206ENST00000490101 MYT1LQ9UL68 1186 aa28.38■■■□□ 2.13
SRM-206ENST00000490101 FYCO1Q9BQS8 1478 aa28.38■■■□□ 2.13
SRM-206ENST00000490101 C9orf84Q5VXU9 1444 aa28.37■■■□□ 2.13
SRM-206ENST00000490101 LMTK3Q96Q04 1460 aa28.37■■■□□ 2.13
SRM-206ENST00000490101 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
SRM-206ENST00000490101 PREX2Q70Z35 1606 aa28.36■■■□□ 2.13
SRM-206ENST00000490101 KDM5CP41229 1560 aa28.33■■■□□ 2.13
SRM-206ENST00000490101 ABCC1P33527 1531 aa28.28■■■□□ 2.12
SRM-206ENST00000490101 ARHGEF12Q9NZN5 1544 aa28.28■■■□□ 2.12
SRM-206ENST00000490101 CDC42BPAQ5VT25 1732 aa28.27■■■□□ 2.12
SRM-206ENST00000490101 DIP2CQ9Y2E4 1556 aa28.27■■■□□ 2.12
SRM-206ENST00000490101 TRAPPC8Q9Y2L5 1435 aa28.26■■■□□ 2.12
SRM-206ENST00000490101 HSPA2P54652 639 aa28.26■■■□□ 2.11
SRM-206ENST00000490101 ITSN2Q9NZM3 1697 aa28.26■■■□□ 2.11
SRM-206ENST00000490101 APLP2Q06481 763 aa28.25■■■□□ 2.11
SRM-206ENST00000490101 ABCA6Q8N139 1617 aa28.25■■■□□ 2.11
SRM-206ENST00000490101 MAP3K1Q13233 1512 aa28.23■■■□□ 2.11
SRM-206ENST00000490101 ZNF777Q9ULD5 760 aaPredicted RBP28.23■■■□□ 2.11
SRM-206ENST00000490101 MLH3Q9UHC1 1453 aa28.21■■■□□ 2.11
SRM-206ENST00000490101 CEBPAP49715 358 aaPredicted RBP28.19■■■□□ 2.1
SRM-206ENST00000490101 REREQ9P2R6 1566 aa28.16■■■□□ 2.1
SRM-206ENST00000490101 GPATCH8Q9UKJ3 1502 aaKnown RBP28.16■■■□□ 2.1
SRM-206ENST00000490101 TIAM1Q13009 1591 aa28.16■■■□□ 2.1
SRM-206ENST00000490101 SAMD9LQ8IVG5 1584 aa28.16■■■□□ 2.1
SRM-206ENST00000490101 SYCP2Q9BX26 1530 aa28.14■■■□□ 2.1
SRM-206ENST00000490101 KIDINS220Q9ULH0 1771 aa28.14■■■□□ 2.09
SRM-206ENST00000490101 MTUS2Q5JR59 1369 aa28.12■■■□□ 2.09
SRM-206ENST00000490101 PREX1Q8TCU6 1659 aa28.11■■■□□ 2.09
SRM-206ENST00000490101 CCNB3Q8WWL7 1395 aa28.11■■■□□ 2.09
SRM-206ENST00000490101 HNRNPMP52272 730 aaKnown RBP eCLIP28.1■■■□□ 2.09
SRM-206ENST00000490101 FBXO41Q8TF61 875 aa28.09■■■□□ 2.09
SRM-206ENST00000490101 CFDP1Q9UEE9 299 aaPredicted RBP28.09■■■□□ 2.09
SRM-206ENST00000490101 AGLP35573 1532 aa28.08■■■□□ 2.09
SRM-206ENST00000490101 PPARGC1BQ86YN6 1023 aaKnown RBP28.07■■■□□ 2.08
SRM-206ENST00000490101 ESF1Q9H501 851 aaKnown RBP28.07■■■□□ 2.08
SRM-206ENST00000490101 SPAG9O60271 1321 aaKnown RBP28.06■■■□□ 2.08
SRM-206ENST00000490101 KANK4Q5T7N3 995 aaPredicted RBP28.05■■■□□ 2.08
SRM-206ENST00000490101 LRRC9Q6ZRR7 1453 aa28.03■■■□□ 2.08
SRM-206ENST00000490101 C3P01024 1663 aa28.03■■■□□ 2.08
SRM-206ENST00000490101 PLEKHH2Q8IVE3 1493 aa28.02■■■□□ 2.08
SRM-206ENST00000490101 EHBP1L1Q8N3D4 1523 aa28.01■■■□□ 2.07
SRM-206ENST00000490101 UHRF1BP1Q6BDS2 1440 aa28.01■■■□□ 2.07
SRM-206ENST00000490101 KIAA1107Q9UPP5 1409 aa28■■■□□ 2.07
SRM-206ENST00000490101 ATP7AQ04656 1500 aa27.99■■■□□ 2.07
SRM-206ENST00000490101 SUPT6HQ7KZ85 1726 aaKnown RBP27.98■■■□□ 2.07
SRM-206ENST00000490101 INO80Q9ULG1 1556 aaPredicted RBP27.96■■■□□ 2.07
SRM-206ENST00000490101 ZNF644Q9H582 1327 aaPredicted RBP27.95■■■□□ 2.07
SRM-206ENST00000490101 SETD1BQ9UPS6 1966 aaKnown RBP27.94■■■□□ 2.06
SRM-206ENST00000490101 CNTLNQ9NXG0 1405 aa27.93■■■□□ 2.06
SRM-206ENST00000490101 A2MP01023 1474 aa27.9■■■□□ 2.06
SRM-206ENST00000490101 PLXNC1O60486 1568 aa27.89■■■□□ 2.05
SRM-206ENST00000490101 STRCQ7RTU9 1775 aa27.88■■■□□ 2.05
SRM-206ENST00000490101 CERKQ8TCT0 537 aa27.86■■■□□ 2.05
SRM-206ENST00000490101 MROH2AA6NES4 1674 aa27.86■■■□□ 2.05
SRM-206ENST00000490101 NCOA2Q15596 1464 aa27.84■■■□□ 2.05
SRM-206ENST00000490101 MBD5Q9P267 1494 aa27.84■■■□□ 2.05
SRM-206ENST00000490101 GGT6Q6P531 493 aa27.84■■■□□ 2.05
SRM-206ENST00000490101 CLTCQ00610 1675 aaKnown RBP27.84■■■□□ 2.05
SRM-206ENST00000490101 DMRT2Q9Y5R5 561 aa27.83■■■□□ 2.05
SRM-206ENST00000490101 ADGBQ8N7X0 1667 aa27.83■■■□□ 2.05
SRM-206ENST00000490101 ZMYM3Q14202 1370 aa27.83■■■□□ 2.05
SRM-206ENST00000490101 TRIM26Q12899 539 aaPredicted RBP27.82■■■□□ 2.04
SRM-206ENST00000490101 CAMSAP2Q08AD1 1489 aa27.78■■■□□ 2.04
SRM-206ENST00000490101 NPATQ14207 1427 aa27.78■■■□□ 2.04
SRM-206ENST00000490101 CCDC141Q6ZP82 1450 aa27.76■■■□□ 2.03
SRM-206ENST00000490101 RTEL1-TNFRSF6BF6WH68 1400 aa27.75■■■□□ 2.03
SRM-206ENST00000490101 PTPRTO14522 1441 aa27.72■■■□□ 2.03
SRM-206ENST00000490101 NCOA1Q15788 1441 aa27.72■■■□□ 2.03
SRM-206ENST00000490101 DHX29Q7Z478 1369 aaKnown RBP27.71■■■□□ 2.03
SRM-206ENST00000490101 CAMSAP1Q5T5Y3 1602 aa27.7■■■□□ 2.03
SRM-206ENST00000490101 MYO3AQ8NEV4 1616 aa27.7■■■□□ 2.02
SRM-206ENST00000490101 PTPRKQ15262 1439 aa27.69■■■□□ 2.02
SRM-206ENST00000490101 RRBP1Q9P2E9 1410 aaKnown RBP27.67■■■□□ 2.02
SRM-206ENST00000490101 KIF3BO15066 747 aa27.66■■■□□ 2.02
SRM-206ENST00000490101 PPP6R1Q9UPN7 881 aa27.66■■■□□ 2.02
SRM-206ENST00000490101 RSPH4AQ5TD94 716 aa27.65■■■□□ 2.02
SRM-206ENST00000490101 ZNF142P52746 1687 aaPredicted RBP27.64■■■□□ 2.02
SRM-206ENST00000490101 MYOM3Q5VTT5 1437 aa27.64■■■□□ 2.02
SRM-206ENST00000490101 ARHGEF5Q12774 1597 aa27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms