RNA–Protein interactions for RNA: ENST00000490006.6

LINC01140-207, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 1,389 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-207ENST00000490006 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
LINC01140-207ENST00000490006 DIP2BQ9P265 1576 aa16.28■□□□□ 0.2
LINC01140-207ENST00000490006 KIF13AQ9H1H9 1805 aa16.27■□□□□ 0.19
LINC01140-207ENST00000490006 EHBP1L1Q8N3D4 1523 aa16.27■□□□□ 0.19
LINC01140-207ENST00000490006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.27■□□□□ 0.19
LINC01140-207ENST00000490006 EFCAB2Q5VUJ9 269 aa16.26■□□□□ 0.19
LINC01140-207ENST00000490006 RNF39Q9H2S5 420 aa16.26■□□□□ 0.19
LINC01140-207ENST00000490006 NCOA2Q15596 1464 aa16.26■□□□□ 0.19
LINC01140-207ENST00000490006 SUPT6HQ7KZ85 1726 aaKnown RBP16.23■□□□□ 0.19
LINC01140-207ENST00000490006 GLI2P10070 1586 aa16.23■□□□□ 0.19
LINC01140-207ENST00000490006 TTC37Q6PGP7 1564 aa16.23■□□□□ 0.19
LINC01140-207ENST00000490006 ZNF644Q9H582 1327 aaPredicted RBP16.22■□□□□ 0.19
LINC01140-207ENST00000490006 FAM50AQ14320 339 aaKnown RBP16.22■□□□□ 0.19
LINC01140-207ENST00000490006 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
LINC01140-207ENST00000490006 PLCH2O75038 1416 aa16.2■□□□□ 0.18
LINC01140-207ENST00000490006 ABCA9Q8IUA7 1624 aa16.2■□□□□ 0.18
LINC01140-207ENST00000490006 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.18
LINC01140-207ENST00000490006 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
LINC01140-207ENST00000490006 ARHGAP5Q13017 1502 aa16.2■□□□□ 0.18
LINC01140-207ENST00000490006 GPATCH8Q9UKJ3 1502 aaKnown RBP16.2■□□□□ 0.18
LINC01140-207ENST00000490006 ITGAEP38570 1179 aa16.18■□□□□ 0.18
LINC01140-207ENST00000490006 MAP3K4Q9Y6R4 1608 aa16.17■□□□□ 0.18
LINC01140-207ENST00000490006 RAPGEF3O95398 923 aa16.16■□□□□ 0.18
LINC01140-207ENST00000490006 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
LINC01140-207ENST00000490006 FANCAO15360 1455 aa16.16■□□□□ 0.18
LINC01140-207ENST00000490006 MYO5CQ9NQX4 1742 aa16.15■□□□□ 0.18
LINC01140-207ENST00000490006 AKNAQ7Z591 1439 aa16.15■□□□□ 0.18
LINC01140-207ENST00000490006 CDC42BPAQ5VT25 1732 aa16.14■□□□□ 0.17
LINC01140-207ENST00000490006 MYOM3Q5VTT5 1437 aa16.14■□□□□ 0.17
LINC01140-207ENST00000490006 TEX14Q8IWB6 1497 aa16.14■□□□□ 0.17
LINC01140-207ENST00000490006 CDC42BPBQ9Y5S2 1711 aa16.13■□□□□ 0.17
LINC01140-207ENST00000490006 AFAP1Q8N556 730 aa16.13■□□□□ 0.17
LINC01140-207ENST00000490006 SCAPERQ9BY12 1400 aa16.12■□□□□ 0.17
LINC01140-207ENST00000490006 PPRC1Q5VV67 1664 aaKnown RBP16.1■□□□□ 0.17
LINC01140-207ENST00000490006 CHIC2Q9UKJ5 165 aa16.09■□□□□ 0.17
LINC01140-207ENST00000490006 ADGRL1O94910 1474 aa16.09■□□□□ 0.17
LINC01140-207ENST00000490006 PREX2Q70Z35 1606 aa16.09■□□□□ 0.17
LINC01140-207ENST00000490006 FGD6Q6ZV73 1430 aa16.08■□□□□ 0.16
LINC01140-207ENST00000490006 ITSN2Q9NZM3 1697 aa16.07■□□□□ 0.16
LINC01140-207ENST00000490006 NEO1Q92859 1461 aa16.07■□□□□ 0.16
LINC01140-207ENST00000490006 TSPY4P0CV99 314 aa16.06■□□□□ 0.16
LINC01140-207ENST00000490006 TSPY10P0CW01 314 aa16.06■□□□□ 0.16
LINC01140-207ENST00000490006 COL17A1Q9UMD9 1497 aaPredicted RBP16.05■□□□□ 0.16
LINC01140-207ENST00000490006 MIA2Q96PC5 1412 aa16.05■□□□□ 0.16
LINC01140-207ENST00000490006 CAMSAP2Q08AD1 1489 aa16.05■□□□□ 0.16
LINC01140-207ENST00000490006 DENND4BO75064 1496 aaPredicted RBP16.04■□□□□ 0.16
LINC01140-207ENST00000490006 TRAPPC8Q9Y2L5 1435 aa16.04■□□□□ 0.16
LINC01140-207ENST00000490006 PTPN23Q9H3S7 1636 aa16.04■□□□□ 0.16
LINC01140-207ENST00000490006 SAMD9LQ8IVG5 1584 aa16.03■□□□□ 0.16
LINC01140-207ENST00000490006 ARHGEF12Q9NZN5 1544 aa16.03■□□□□ 0.16
LINC01140-207ENST00000490006 SPAG9O60271 1321 aaKnown RBP16.03■□□□□ 0.16
LINC01140-207ENST00000490006 ARAP3Q8WWN8 1544 aa16.02■□□□□ 0.16
LINC01140-207ENST00000490006 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
LINC01140-207ENST00000490006 CFAP74Q9C0B2 1584 aa16.02■□□□□ 0.15
LINC01140-207ENST00000490006 RSPH4AQ5TD94 716 aa16.01■□□□□ 0.15
LINC01140-207ENST00000490006 SYCP2Q9BX26 1530 aa16.01■□□□□ 0.15
LINC01140-207ENST00000490006 PLEKHH2Q8IVE3 1493 aa16.01■□□□□ 0.15
LINC01140-207ENST00000490006 KDM6BO15054 1643 aa16■□□□□ 0.15
LINC01140-207ENST00000490006 KIAA1107Q9UPP5 1409 aa15.99■□□□□ 0.15
LINC01140-207ENST00000490006 RRP7BPQ9NSQ0 103 aa15.99■□□□□ 0.15
LINC01140-207ENST00000490006 ABCC1P33527 1531 aa15.97■□□□□ 0.15
LINC01140-207ENST00000490006 MBD5Q9P267 1494 aa15.97■□□□□ 0.15
LINC01140-207ENST00000490006 ABCC5O15440 1437 aa15.95■□□□□ 0.14
LINC01140-207ENST00000490006 POGZQ7Z3K3 1410 aa15.95■□□□□ 0.14
LINC01140-207ENST00000490006 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
LINC01140-207ENST00000490006 TCOF1Q13428 1488 aaKnown RBP15.95■□□□□ 0.14
LINC01140-207ENST00000490006 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
LINC01140-207ENST00000490006 TRIM26Q12899 539 aaPredicted RBP15.94■□□□□ 0.14
LINC01140-207ENST00000490006 ZNF518AQ6AHZ1 1483 aa15.93■□□□□ 0.14
LINC01140-207ENST00000490006 DAPK1P53355 1430 aa15.93■□□□□ 0.14
LINC01140-207ENST00000490006 CCDC141Q6ZP82 1450 aa15.93■□□□□ 0.14
LINC01140-207ENST00000490006 MLECQ14165 292 aa15.91■□□□□ 0.14
LINC01140-207ENST00000490006 PTPRKQ15262 1439 aa15.9■□□□□ 0.14
LINC01140-207ENST00000490006 RICTORQ6R327 1708 aa15.9■□□□□ 0.14
LINC01140-207ENST00000490006 C9orf84Q5VXU9 1444 aa15.9■□□□□ 0.14
LINC01140-207ENST00000490006 YEATS2Q9ULM3 1422 aa15.9■□□□□ 0.14
LINC01140-207ENST00000490006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.89■□□□□ 0.13
LINC01140-207ENST00000490006 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
LINC01140-207ENST00000490006 ARHGEF5Q12774 1597 aa15.88■□□□□ 0.13
LINC01140-207ENST00000490006 FRMPD1Q5SYB0 1578 aa15.88■□□□□ 0.13
LINC01140-207ENST00000490006 ANKRD30AQ9BXX3 1397 aa15.87■□□□□ 0.13
LINC01140-207ENST00000490006 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
LINC01140-207ENST00000490006 DNMT1P26358 1616 aaKnown RBP15.86■□□□□ 0.13
LINC01140-207ENST00000490006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.86■□□□□ 0.13
LINC01140-207ENST00000490006 KIF3BO15066 747 aa15.85■□□□□ 0.13
LINC01140-207ENST00000490006 GGT6Q6P531 493 aa15.85■□□□□ 0.13
LINC01140-207ENST00000490006 MLH3Q9UHC1 1453 aa15.85■□□□□ 0.13
LINC01140-207ENST00000490006 ATP7AQ04656 1500 aa15.84■□□□□ 0.13
LINC01140-207ENST00000490006 ZFYVE16Q7Z3T8 1539 aa15.84■□□□□ 0.13
LINC01140-207ENST00000490006 HECW2Q9P2P5 1572 aa15.83■□□□□ 0.12
LINC01140-207ENST00000490006 ATP10AO60312 1499 aa15.83■□□□□ 0.12
LINC01140-207ENST00000490006 RTEL1-TNFRSF6BF6WH68 1400 aa15.83■□□□□ 0.12
LINC01140-207ENST00000490006 KIF15Q9NS87 1388 aa15.83■□□□□ 0.12
LINC01140-207ENST00000490006 KIDINS220Q9ULH0 1771 aa15.83■□□□□ 0.12
LINC01140-207ENST00000490006 KDM5CP41229 1560 aa15.82■□□□□ 0.12
LINC01140-207ENST00000490006 MAGI2Q86UL8 1455 aa15.82■□□□□ 0.12
LINC01140-207ENST00000490006 NCOA1Q15788 1441 aa15.82■□□□□ 0.12
LINC01140-207ENST00000490006 DHX29Q7Z478 1369 aaKnown RBP15.8■□□□□ 0.12
LINC01140-207ENST00000490006 TRIM52Q96A61 297 aa15.8■□□□□ 0.12
LINC01140-207ENST00000490006 ZMYM4Q5VZL5 1548 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms