RNA–Protein interactions for RNA: ENST00000490005.1

SOX2-OT-211, SOX2 overlapping transcript, humanhuman

TSL 2

Gene SOX2-OT, Length 387 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-211ENST00000490005 ARHGEF40Q8TER5 1519 aa22.21■■□□□ 1.15
SOX2-OT-211ENST00000490005 EFCAB2Q5VUJ9 269 aa22.2■■□□□ 1.14
SOX2-OT-211ENST00000490005 MYO5CQ9NQX4 1742 aa22.2■■□□□ 1.14
SOX2-OT-211ENST00000490005 ZMYM4Q5VZL5 1548 aa22.18■■□□□ 1.14
SOX2-OT-211ENST00000490005 ARID4BQ4LE39 1312 aaPredicted RBP22.15■■□□□ 1.14
SOX2-OT-211ENST00000490005 AFAP1Q8N556 730 aa22.15■■□□□ 1.14
SOX2-OT-211ENST00000490005 ZFYVE16Q7Z3T8 1539 aa22.15■■□□□ 1.14
SOX2-OT-211ENST00000490005 SIGLEC1Q9BZZ2 1709 aa22.14■■□□□ 1.14
SOX2-OT-211ENST00000490005 ARHGEF12Q9NZN5 1544 aa22.13■■□□□ 1.13
SOX2-OT-211ENST00000490005 PREX2Q70Z35 1606 aa22.12■■□□□ 1.13
SOX2-OT-211ENST00000490005 CDC42BPBQ9Y5S2 1711 aa22.11■■□□□ 1.13
SOX2-OT-211ENST00000490005 TRAPPC8Q9Y2L5 1435 aa22.1■■□□□ 1.13
SOX2-OT-211ENST00000490005 ADAMTSL3P82987 1691 aa22.09■■□□□ 1.13
SOX2-OT-211ENST00000490005 GPATCH8Q9UKJ3 1502 aaKnown RBP22.08■■□□□ 1.13
SOX2-OT-211ENST00000490005 MTUS2Q5JR59 1369 aa22.08■■□□□ 1.12
SOX2-OT-211ENST00000490005 ABCC1P33527 1531 aa22.07■■□□□ 1.12
SOX2-OT-211ENST00000490005 ZNF777Q9ULD5 760 aaPredicted RBP22.07■■□□□ 1.12
SOX2-OT-211ENST00000490005 ZNF518AQ6AHZ1 1483 aa22.07■■□□□ 1.12
SOX2-OT-211ENST00000490005 MAGI2Q86UL8 1455 aa22.07■■□□□ 1.12
SOX2-OT-211ENST00000490005 MADDQ8WXG6 1647 aa22.06■■□□□ 1.12
SOX2-OT-211ENST00000490005 BCORL1Q5H9F3 1711 aa22.06■■□□□ 1.12
SOX2-OT-211ENST00000490005 CDC42BPAQ5VT25 1732 aa22.06■■□□□ 1.12
SOX2-OT-211ENST00000490005 KDM5CP41229 1560 aa22.05■■□□□ 1.12
SOX2-OT-211ENST00000490005 PTPRMP28827 1452 aa22.05■■□□□ 1.12
SOX2-OT-211ENST00000490005 MLECQ14165 292 aa22.05■■□□□ 1.12
SOX2-OT-211ENST00000490005 SAMD9LQ8IVG5 1584 aa22.03■■□□□ 1.12
SOX2-OT-211ENST00000490005 HECW2Q9P2P5 1572 aa22.02■■□□□ 1.12
SOX2-OT-211ENST00000490005 ATP10AO60312 1499 aa22.02■■□□□ 1.12
SOX2-OT-211ENST00000490005 CCNB3Q8WWL7 1395 aa22.01■■□□□ 1.11
SOX2-OT-211ENST00000490005 VPS8Q8N3P4 1428 aa22■■□□□ 1.11
SOX2-OT-211ENST00000490005 ZNF644Q9H582 1327 aaPredicted RBP22■■□□□ 1.11
SOX2-OT-211ENST00000490005 EHBP1L1Q8N3D4 1523 aa22■■□□□ 1.11
SOX2-OT-211ENST00000490005 SYCP2Q9BX26 1530 aa22■■□□□ 1.11
SOX2-OT-211ENST00000490005 C9orf84Q5VXU9 1444 aa21.99■■□□□ 1.11
SOX2-OT-211ENST00000490005 HNRNPMP52272 730 aaKnown RBP eCLIP21.99■■□□□ 1.11
SOX2-OT-211ENST00000490005 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
SOX2-OT-211ENST00000490005 TIAM1Q13009 1591 aa21.99■■□□□ 1.11
SOX2-OT-211ENST00000490005 DIP2CQ9Y2E4 1556 aa21.99■■□□□ 1.11
SOX2-OT-211ENST00000490005 ITSN2Q9NZM3 1697 aa21.98■■□□□ 1.11
SOX2-OT-211ENST00000490005 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
SOX2-OT-211ENST00000490005 CFDP1Q9UEE9 299 aaPredicted RBP21.98■■□□□ 1.11
SOX2-OT-211ENST00000490005 ABCA6Q8N139 1617 aa21.97■■□□□ 1.11
SOX2-OT-211ENST00000490005 MLH3Q9UHC1 1453 aa21.96■■□□□ 1.11
SOX2-OT-211ENST00000490005 RIMS1Q86UR5 1692 aaKnown RBP21.95■■□□□ 1.1
SOX2-OT-211ENST00000490005 NCOA2Q15596 1464 aa21.92■■□□□ 1.1
SOX2-OT-211ENST00000490005 KANK4Q5T7N3 995 aaPredicted RBP21.92■■□□□ 1.1
SOX2-OT-211ENST00000490005 KIDINS220Q9ULH0 1771 aa21.89■■□□□ 1.1
SOX2-OT-211ENST00000490005 KIAA1107Q9UPP5 1409 aa21.88■■□□□ 1.09
SOX2-OT-211ENST00000490005 SPAG9O60271 1321 aaKnown RBP21.87■■□□□ 1.09
SOX2-OT-211ENST00000490005 LRRC9Q6ZRR7 1453 aa21.87■■□□□ 1.09
SOX2-OT-211ENST00000490005 CEBPAP49715 358 aaPredicted RBP21.86■■□□□ 1.09
SOX2-OT-211ENST00000490005 MBD5Q9P267 1494 aa21.85■■□□□ 1.09
SOX2-OT-211ENST00000490005 PLEKHH2Q8IVE3 1493 aa21.84■■□□□ 1.09
SOX2-OT-211ENST00000490005 REREQ9P2R6 1566 aa21.84■■□□□ 1.09
SOX2-OT-211ENST00000490005 ATP7AQ04656 1500 aa21.83■■□□□ 1.09
SOX2-OT-211ENST00000490005 LMTK3Q96Q04 1460 aa21.83■■□□□ 1.08
SOX2-OT-211ENST00000490005 FER1L4A9Z1Z3 1794 aa21.82■■□□□ 1.08
SOX2-OT-211ENST00000490005 SUPT6HQ7KZ85 1726 aaKnown RBP21.82■■□□□ 1.08
SOX2-OT-211ENST00000490005 INO80Q9ULG1 1556 aaPredicted RBP21.82■■□□□ 1.08
SOX2-OT-211ENST00000490005 CAMSAP2Q08AD1 1489 aa21.81■■□□□ 1.08
SOX2-OT-211ENST00000490005 AGLP35573 1532 aa21.8■■□□□ 1.08
SOX2-OT-211ENST00000490005 HSPA2P54652 639 aa21.79■■□□□ 1.08
SOX2-OT-211ENST00000490005 MAP3K1Q13233 1512 aa21.76■■□□□ 1.07
SOX2-OT-211ENST00000490005 A2MP01023 1474 aa21.75■■□□□ 1.07
SOX2-OT-211ENST00000490005 PLXNC1O60486 1568 aa21.73■■□□□ 1.07
SOX2-OT-211ENST00000490005 CCDC141Q6ZP82 1450 aa21.72■■□□□ 1.07
SOX2-OT-211ENST00000490005 MYOM3Q5VTT5 1437 aa21.69■■□□□ 1.06
SOX2-OT-211ENST00000490005 RTEL1-TNFRSF6BF6WH68 1400 aa21.66■■□□□ 1.06
SOX2-OT-211ENST00000490005 GGT6Q6P531 493 aa21.66■■□□□ 1.06
SOX2-OT-211ENST00000490005 C3P01024 1663 aa21.64■■□□□ 1.05
SOX2-OT-211ENST00000490005 ESF1Q9H501 851 aaKnown RBP21.64■■□□□ 1.05
SOX2-OT-211ENST00000490005 ARHGEF5Q12774 1597 aa21.64■■□□□ 1.05
SOX2-OT-211ENST00000490005 DHX29Q7Z478 1369 aaKnown RBP21.63■■□□□ 1.05
SOX2-OT-211ENST00000490005 APLP2Q06481 763 aa21.63■■□□□ 1.05
SOX2-OT-211ENST00000490005 ADGBQ8N7X0 1667 aa21.62■■□□□ 1.05
SOX2-OT-211ENST00000490005 MIA2Q96PC5 1412 aa21.61■■□□□ 1.05
SOX2-OT-211ENST00000490005 CNTLNQ9NXG0 1405 aa21.6■■□□□ 1.05
SOX2-OT-211ENST00000490005 ZMYM3Q14202 1370 aa21.6■■□□□ 1.05
SOX2-OT-211ENST00000490005 KIF3BO15066 747 aa21.58■■□□□ 1.05
SOX2-OT-211ENST00000490005 UHRF1BP1Q6BDS2 1440 aa21.57■■□□□ 1.04
SOX2-OT-211ENST00000490005 RSPH4AQ5TD94 716 aa21.57■■□□□ 1.04
SOX2-OT-211ENST00000490005 CLTCQ00610 1675 aaKnown RBP21.56■■□□□ 1.04
SOX2-OT-211ENST00000490005 PREX1Q8TCU6 1659 aa21.56■■□□□ 1.04
SOX2-OT-211ENST00000490005 TSPY4P0CV99 314 aa21.56■■□□□ 1.04
SOX2-OT-211ENST00000490005 TSPY10P0CW01 314 aa21.56■■□□□ 1.04
SOX2-OT-211ENST00000490005 ILDR1Q86SU0 546 aaPredicted RBP21.55■■□□□ 1.04
SOX2-OT-211ENST00000490005 FGD6Q6ZV73 1430 aa21.55■■□□□ 1.04
SOX2-OT-211ENST00000490005 ABCC5O15440 1437 aa21.54■■□□□ 1.04
SOX2-OT-211ENST00000490005 PTPN23Q9H3S7 1636 aa21.52■■□□□ 1.04
SOX2-OT-211ENST00000490005 PTPRKQ15262 1439 aa21.52■■□□□ 1.04
SOX2-OT-211ENST00000490005 MAST1Q9Y2H9 1570 aa21.52■■□□□ 1.04
SOX2-OT-211ENST00000490005 MROH2AA6NES4 1674 aa21.51■■□□□ 1.03
SOX2-OT-211ENST00000490005 TCOF1Q13428 1488 aaKnown RBP21.5■■□□□ 1.03
SOX2-OT-211ENST00000490005 NPATQ14207 1427 aa21.49■■□□□ 1.03
SOX2-OT-211ENST00000490005 PPARGC1BQ86YN6 1023 aaKnown RBP21.49■■□□□ 1.03
SOX2-OT-211ENST00000490005 FBXO31Q5XUX0 539 aaPredicted RBP21.48■■□□□ 1.03
SOX2-OT-211ENST00000490005 DAPK1P53355 1430 aa21.47■■□□□ 1.03
SOX2-OT-211ENST00000490005 RRP7BPQ9NSQ0 103 aa21.45■■□□□ 1.02
SOX2-OT-211ENST00000490005 CHIC2Q9UKJ5 165 aa21.45■■□□□ 1.02
SOX2-OT-211ENST00000490005 KDM5DQ9BY66 1539 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms