RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 MYO5CQ9NQX4 1742 aa15.46■□□□□ 0.07
SNX17-207ENST00000489402 PLCH2O75038 1416 aa15.46■□□□□ 0.07
SNX17-207ENST00000489402 YEATS2Q9ULM3 1422 aa15.46■□□□□ 0.07
SNX17-207ENST00000489402 CDK11AQ9UQ88 783 aaPredicted RBP15.46■□□□□ 0.07
SNX17-207ENST00000489402 LRRIQ1Q96JM4 1722 aa15.46■□□□□ 0.06
SNX17-207ENST00000489402 PCF11O94913 1555 aaKnown RBP15.45■□□□□ 0.06
SNX17-207ENST00000489402 SCAPERQ9BY12 1400 aa15.43■□□□□ 0.06
SNX17-207ENST00000489402 KIF14Q15058 1648 aa15.43■□□□□ 0.06
SNX17-207ENST00000489402 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
SNX17-207ENST00000489402 CLIP1P30622 1438 aa15.41■□□□□ 0.06
SNX17-207ENST00000489402 LMTK3Q96Q04 1460 aa15.4■□□□□ 0.06
SNX17-207ENST00000489402 EFCAB2Q5VUJ9 269 aa15.4■□□□□ 0.06
SNX17-207ENST00000489402 FER1L4A9Z1Z3 1794 aa15.39■□□□□ 0.05
SNX17-207ENST00000489402 TROQ12816 1431 aaPredicted RBP15.39■□□□□ 0.05
SNX17-207ENST00000489402 ARHGAP5Q13017 1502 aa15.38■□□□□ 0.05
SNX17-207ENST00000489402 MLECQ14165 292 aa15.37■□□□□ 0.05
SNX17-207ENST00000489402 ATP10AO60312 1499 aa15.37■□□□□ 0.05
SNX17-207ENST00000489402 ZNF518AQ6AHZ1 1483 aa15.37■□□□□ 0.05
SNX17-207ENST00000489402 C9orf84Q5VXU9 1444 aa15.36■□□□□ 0.05
SNX17-207ENST00000489402 HSPA2P54652 639 aa15.35■□□□□ 0.05
SNX17-207ENST00000489402 FBXO41Q8TF61 875 aa15.35■□□□□ 0.05
SNX17-207ENST00000489402 CCDC18Q5T9S5 1454 aa15.33■□□□□ 0.05
SNX17-207ENST00000489402 ARHGEF12Q9NZN5 1544 aa15.33■□□□□ 0.04
SNX17-207ENST00000489402 KDM5CP41229 1560 aa15.32■□□□□ 0.04
SNX17-207ENST00000489402 AFAP1Q8N556 730 aa15.32■□□□□ 0.04
SNX17-207ENST00000489402 MYT1LQ9UL68 1186 aa15.32■□□□□ 0.04
SNX17-207ENST00000489402 CDC42BPBQ9Y5S2 1711 aa15.31■□□□□ 0.04
SNX17-207ENST00000489402 CASKIN1Q8WXD9 1431 aa15.31■□□□□ 0.04
SNX17-207ENST00000489402 PREX2Q70Z35 1606 aa15.31■□□□□ 0.04
SNX17-207ENST00000489402 CEBPAP49715 358 aaPredicted RBP15.29■□□□□ 0.04
SNX17-207ENST00000489402 PREX1Q8TCU6 1659 aa15.28■□□□□ 0.04
SNX17-207ENST00000489402 DIP2CQ9Y2E4 1556 aa15.28■□□□□ 0.04
SNX17-207ENST00000489402 REREQ9P2R6 1566 aa15.27■□□□□ 0.03
SNX17-207ENST00000489402 ABCC1P33527 1531 aa15.27■□□□□ 0.03
SNX17-207ENST00000489402 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
SNX17-207ENST00000489402 FYCO1Q9BQS8 1478 aa15.26■□□□□ 0.03
SNX17-207ENST00000489402 MLH3Q9UHC1 1453 aa15.26■□□□□ 0.03
SNX17-207ENST00000489402 ABCA6Q8N139 1617 aa15.25■□□□□ 0.03
SNX17-207ENST00000489402 CDC42BPAQ5VT25 1732 aa15.25■□□□□ 0.03
SNX17-207ENST00000489402 TRAPPC8Q9Y2L5 1435 aa15.25■□□□□ 0.03
SNX17-207ENST00000489402 ESF1Q9H501 851 aaKnown RBP15.21■□□□□ 0.03
SNX17-207ENST00000489402 AGLP35573 1532 aa15.21■□□□□ 0.03
SNX17-207ENST00000489402 UHRF1BP1Q6BDS2 1440 aa15.2■□□□□ 0.02
SNX17-207ENST00000489402 KIDINS220Q9ULH0 1771 aa15.2■□□□□ 0.02
SNX17-207ENST00000489402 SETD1BQ9UPS6 1966 aaKnown RBP15.19■□□□□ 0.02
SNX17-207ENST00000489402 C3P01024 1663 aa15.19■□□□□ 0.02
SNX17-207ENST00000489402 ZNF777Q9ULD5 760 aaPredicted RBP15.18■□□□□ 0.02
SNX17-207ENST00000489402 SAMD9LQ8IVG5 1584 aa15.17■□□□□ 0.02
SNX17-207ENST00000489402 SYCP2Q9BX26 1530 aa15.17■□□□□ 0.02
SNX17-207ENST00000489402 CERKQ8TCT0 537 aa15.16■□□□□ 0.02
SNX17-207ENST00000489402 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
SNX17-207ENST00000489402 CNTLNQ9NXG0 1405 aa15.16■□□□□ 0.02
SNX17-207ENST00000489402 HNRNPMP52272 730 aaKnown RBP eCLIP15.15■□□□□ 0.02
SNX17-207ENST00000489402 GPATCH8Q9UKJ3 1502 aaKnown RBP15.15■□□□□ 0.02
SNX17-207ENST00000489402 STRCQ7RTU9 1775 aa15.14■□□□□ 0.01
SNX17-207ENST00000489402 PLEKHH2Q8IVE3 1493 aa15.14■□□□□ 0.01
SNX17-207ENST00000489402 CCNB3Q8WWL7 1395 aa15.13■□□□□ 0.01
SNX17-207ENST00000489402 SPAG9O60271 1321 aaKnown RBP15.13■□□□□ 0.01
SNX17-207ENST00000489402 MTUS2Q5JR59 1369 aa15.12■□□□□ 0.01
SNX17-207ENST00000489402 ATP7AQ04656 1500 aa15.12■□□□□ 0.01
SNX17-207ENST00000489402 SUPT6HQ7KZ85 1726 aaKnown RBP15.12■□□□□ 0.01
SNX17-207ENST00000489402 CFDP1Q9UEE9 299 aaPredicted RBP15.11■□□□□ 0.01
SNX17-207ENST00000489402 MROH2AA6NES4 1674 aa15.11■□□□□ 0.01
SNX17-207ENST00000489402 ZNF644Q9H582 1327 aaPredicted RBP15.11■□□□□ 0.01
SNX17-207ENST00000489402 KIAA1107Q9UPP5 1409 aa15.1■□□□□ 0.01
SNX17-207ENST00000489402 INO80Q9ULG1 1556 aaPredicted RBP15.1■□□□□ 0.01
SNX17-207ENST00000489402 EHBP1L1Q8N3D4 1523 aa15.08■□□□□ 0.01
SNX17-207ENST00000489402 PTPRTO14522 1441 aa15.07■□□□□ 0
SNX17-207ENST00000489402 NPATQ14207 1427 aa15.07■□□□□ 0
SNX17-207ENST00000489402 A2MP01023 1474 aa15.07■□□□□ 0
SNX17-207ENST00000489402 PLXNC1O60486 1568 aa15.07■□□□□ 0
SNX17-207ENST00000489402 TIAM1Q13009 1591 aa15.06■□□□□ 0
SNX17-207ENST00000489402 CLTCQ00610 1675 aaKnown RBP15.06■□□□□ 0
SNX17-207ENST00000489402 ADGBQ8N7X0 1667 aa15.06■□□□□ 0
SNX17-207ENST00000489402 ZMYM3Q14202 1370 aa15.04■□□□□ -0
SNX17-207ENST00000489402 NCOA1Q15788 1441 aa15.03■□□□□ -0
SNX17-207ENST00000489402 CAMSAP1Q5T5Y3 1602 aa15.02□□□□□ -0.01
SNX17-207ENST00000489402 CEP162Q5TB80 1403 aa15.01□□□□□ -0.01
SNX17-207ENST00000489402 GGT6Q6P531 493 aa15.01□□□□□ -0.01
SNX17-207ENST00000489402 ZNF142P52746 1687 aaPredicted RBP15□□□□□ -0.01
SNX17-207ENST00000489402 MYO3AQ8NEV4 1616 aa15□□□□□ -0.01
SNX17-207ENST00000489402 LOC105371045A0A1W2PR82 267 aa15□□□□□ -0.01
SNX17-207ENST00000489402 MBD5Q9P267 1494 aa15□□□□□ -0.01
SNX17-207ENST00000489402 PPP6R1Q9UPN7 881 aa14.99□□□□□ -0.01
SNX17-207ENST00000489402 RTEL1-TNFRSF6BF6WH68 1400 aa14.99□□□□□ -0.01
SNX17-207ENST00000489402 CEP170BQ9Y4F5 1589 aaPredicted RBP14.98□□□□□ -0.01
SNX17-207ENST00000489402 LTBP4Q8N2S1 1624 aa14.97□□□□□ -0.01
SNX17-207ENST00000489402 PTPRKQ15262 1439 aa14.97□□□□□ -0.01
SNX17-207ENST00000489402 NCKAP5LQ9HCH0 1330 aa14.96□□□□□ -0.01
SNX17-207ENST00000489402 IQSEC2Q5JU85 1478 aa14.96□□□□□ -0.01
SNX17-207ENST00000489402 PLA2R1Q13018 1463 aa14.95□□□□□ -0.02
SNX17-207ENST00000489402 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
SNX17-207ENST00000489402 CCDC141Q6ZP82 1450 aa14.95□□□□□ -0.02
SNX17-207ENST00000489402 CAMSAP2Q08AD1 1489 aa14.95□□□□□ -0.02
SNX17-207ENST00000489402 DHX29Q7Z478 1369 aaKnown RBP14.94□□□□□ -0.02
SNX17-207ENST00000489402 PKD2Q13563 968 aa14.93□□□□□ -0.02
SNX17-207ENST00000489402 RSPH4AQ5TD94 716 aa14.93□□□□□ -0.02
SNX17-207ENST00000489402 FAM135AQ9P2D6 1515 aa14.92□□□□□ -0.02
SNX17-207ENST00000489402 KIF3BO15066 747 aa14.91□□□□□ -0.02
SNX17-207ENST00000489402 KDM5DQ9BY66 1539 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 515.8 ms