RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 ZNF777Q9ULD5 760 aaPredicted RBP26.98■■□□□ 1.91
CD40-206ENST00000489304 SETD5Q9C0A6 1442 aa26.94■■□□□ 1.9
CD40-206ENST00000489304 CAMSAP2Q08AD1 1489 aa26.93■■□□□ 1.9
CD40-206ENST00000489304 PREX2Q70Z35 1606 aa26.9■■□□□ 1.9
CD40-206ENST00000489304 CDC42BPBQ9Y5S2 1711 aa26.9■■□□□ 1.9
CD40-206ENST00000489304 RAB3GAP2Q9H2M9 1393 aa26.89■■□□□ 1.89
CD40-206ENST00000489304 DNMT1P26358 1616 aaKnown RBP26.86■■□□□ 1.89
CD40-206ENST00000489304 CHIC2Q9UKJ5 165 aa26.86■■□□□ 1.89
CD40-206ENST00000489304 ABCC5O15440 1437 aa26.86■■□□□ 1.89
CD40-206ENST00000489304 DAPK1P53355 1430 aa26.84■■□□□ 1.89
CD40-206ENST00000489304 ARHGAP5Q13017 1502 aa26.84■■□□□ 1.89
CD40-206ENST00000489304 PLCH2O75038 1416 aa26.84■■□□□ 1.89
CD40-206ENST00000489304 MYO5CQ9NQX4 1742 aa26.83■■□□□ 1.89
CD40-206ENST00000489304 HFM1A2PYH4 1435 aa26.83■■□□□ 1.89
CD40-206ENST00000489304 DHX57Q6P158 1386 aaKnown RBP26.83■■□□□ 1.88
CD40-206ENST00000489304 SAMD9LQ8IVG5 1584 aa26.82■■□□□ 1.88
CD40-206ENST00000489304 ABCA9Q8IUA7 1624 aa26.8■■□□□ 1.88
CD40-206ENST00000489304 AKNAQ7Z591 1439 aa26.8■■□□□ 1.88
CD40-206ENST00000489304 HNRNPMP52272 730 aaKnown RBP eCLIP26.79■■□□□ 1.88
CD40-206ENST00000489304 GCC2Q8IWJ2 1684 aa26.78■■□□□ 1.88
CD40-206ENST00000489304 RRP7BPQ9NSQ0 103 aa26.77■■□□□ 1.88
CD40-206ENST00000489304 NAIPQ13075 1403 aa26.77■■□□□ 1.88
CD40-206ENST00000489304 MAPKBP1O60336 1514 aa26.77■■□□□ 1.88
CD40-206ENST00000489304 CLSPNQ9HAW4 1339 aa26.76■■□□□ 1.88
CD40-206ENST00000489304 CROCC2H7BZ55 1655 aa26.75■■□□□ 1.87
CD40-206ENST00000489304 EFCAB2Q5VUJ9 269 aa26.74■■□□□ 1.87
CD40-206ENST00000489304 MBD5Q9P267 1494 aa26.74■■□□□ 1.87
CD40-206ENST00000489304 ROCK1Q13464 1354 aa26.72■■□□□ 1.87
CD40-206ENST00000489304 SYCP2Q9BX26 1530 aa26.7■■□□□ 1.87
CD40-206ENST00000489304 ADGBQ8N7X0 1667 aa26.7■■□□□ 1.86
CD40-206ENST00000489304 ARHGEF12Q9NZN5 1544 aa26.7■■□□□ 1.86
CD40-206ENST00000489304 ARAP3Q8WWN8 1544 aa26.69■■□□□ 1.86
CD40-206ENST00000489304 ARHGEF5Q12774 1597 aa26.68■■□□□ 1.86
CD40-206ENST00000489304 CD109Q6YHK3 1445 aa26.66■■□□□ 1.86
CD40-206ENST00000489304 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
CD40-206ENST00000489304 FANCAO15360 1455 aa26.64■■□□□ 1.86
CD40-206ENST00000489304 CCDC141Q6ZP82 1450 aa26.64■■□□□ 1.86
CD40-206ENST00000489304 PLEKHH2Q8IVE3 1493 aa26.64■■□□□ 1.86
CD40-206ENST00000489304 ADGRL2O95490 1459 aa26.64■■□□□ 1.85
CD40-206ENST00000489304 ABCC1P33527 1531 aa26.63■■□□□ 1.85
CD40-206ENST00000489304 SHANK2Q9UPX8 1470 aa26.63■■□□□ 1.85
CD40-206ENST00000489304 C9orf84Q5VXU9 1444 aa26.63■■□□□ 1.85
CD40-206ENST00000489304 KDM6BO15054 1643 aa26.62■■□□□ 1.85
CD40-206ENST00000489304 TSPY4P0CV99 314 aa26.61■■□□□ 1.85
CD40-206ENST00000489304 TSPY10P0CW01 314 aa26.61■■□□□ 1.85
CD40-206ENST00000489304 NCOA1Q15788 1441 aa26.61■■□□□ 1.85
CD40-206ENST00000489304 TRAPPC8Q9Y2L5 1435 aa26.6■■□□□ 1.85
CD40-206ENST00000489304 RSPH4AQ5TD94 716 aa26.59■■□□□ 1.85
CD40-206ENST00000489304 FAM69CQ0P6D2 419 aa26.58■■□□□ 1.85
CD40-206ENST00000489304 GLI2P10070 1586 aa26.57■■□□□ 1.84
CD40-206ENST00000489304 DIP2BQ9P265 1576 aa26.57■■□□□ 1.84
CD40-206ENST00000489304 ANKRD30AQ9BXX3 1397 aa26.57■■□□□ 1.84
CD40-206ENST00000489304 ACIN1Q9UKV3 1341 aaKnown RBP26.54■■□□□ 1.84
CD40-206ENST00000489304 ADGRL1O94910 1474 aa26.53■■□□□ 1.84
CD40-206ENST00000489304 SCAPERQ9BY12 1400 aa26.53■■□□□ 1.84
CD40-206ENST00000489304 MAP3K4Q9Y6R4 1608 aa26.53■■□□□ 1.84
CD40-206ENST00000489304 AFAP1Q8N556 730 aa26.53■■□□□ 1.84
CD40-206ENST00000489304 DNAJC5Q9H3Z4 198 aa26.52■■□□□ 1.84
CD40-206ENST00000489304 MAST1Q9Y2H9 1570 aa26.51■■□□□ 1.83
CD40-206ENST00000489304 KIF15Q9NS87 1388 aa26.47■■□□□ 1.83
CD40-206ENST00000489304 CFAP74Q9C0B2 1584 aa26.45■■□□□ 1.82
CD40-206ENST00000489304 TRIM52Q96A61 297 aa26.45■■□□□ 1.82
CD40-206ENST00000489304 SPAG9O60271 1321 aaKnown RBP26.43■■□□□ 1.82
CD40-206ENST00000489304 ANKRD50Q9ULJ7 1429 aa26.43■■□□□ 1.82
CD40-206ENST00000489304 NEO1Q92859 1461 aa26.43■■□□□ 1.82
CD40-206ENST00000489304 PLXNC1O60486 1568 aa26.39■■□□□ 1.81
CD40-206ENST00000489304 KIF13AQ9H1H9 1805 aa26.38■■□□□ 1.81
CD40-206ENST00000489304 PPRC1Q5VV67 1664 aaKnown RBP26.38■■□□□ 1.81
CD40-206ENST00000489304 ZFYVE16Q7Z3T8 1539 aa26.37■■□□□ 1.81
CD40-206ENST00000489304 RTEL1-TNFRSF6BF6WH68 1400 aa26.37■■□□□ 1.81
CD40-206ENST00000489304 TSPOAP1O95153 1857 aa26.37■■□□□ 1.81
CD40-206ENST00000489304 POGZQ7Z3K3 1410 aa26.36■■□□□ 1.81
CD40-206ENST00000489304 DENND4BO75064 1496 aaPredicted RBP26.36■■□□□ 1.81
CD40-206ENST00000489304 RAPGEF3O95398 923 aa26.34■■□□□ 1.81
CD40-206ENST00000489304 INO80Q9ULG1 1556 aaPredicted RBP26.34■■□□□ 1.81
CD40-206ENST00000489304 ZNF518AQ6AHZ1 1483 aa26.34■■□□□ 1.81
CD40-206ENST00000489304 ATP7AQ04656 1500 aa26.33■■□□□ 1.81
CD40-206ENST00000489304 MYT1LQ9UL68 1186 aa26.33■■□□□ 1.81
CD40-206ENST00000489304 MPHOSPH9Q99550 1183 aa26.31■■□□□ 1.8
CD40-206ENST00000489304 DUOX2Q9NRD8 1548 aa26.31■■□□□ 1.8
CD40-206ENST00000489304 KDM5CP41229 1560 aa26.29■■□□□ 1.8
CD40-206ENST00000489304 PZPP20742 1482 aa26.28■■□□□ 1.8
CD40-206ENST00000489304 SIN3AQ96ST3 1273 aa26.28■■□□□ 1.8
CD40-206ENST00000489304 KIDINS220Q9ULH0 1771 aa26.27■■□□□ 1.8
CD40-206ENST00000489304 TIMELESSQ9UNS1 1208 aa26.27■■□□□ 1.8
CD40-206ENST00000489304 TEX14Q8IWB6 1497 aa26.26■■□□□ 1.79
CD40-206ENST00000489304 KDM5DQ9BY66 1539 aa26.26■■□□□ 1.79
CD40-206ENST00000489304 FOXD1Q16676 465 aa26.25■■□□□ 1.79
CD40-206ENST00000489304 SLC4A1APQ9BWU0 796 aaKnown RBP26.24■■□□□ 1.79
CD40-206ENST00000489304 NUP155O75694 1391 aa26.24■■□□□ 1.79
CD40-206ENST00000489304 ERBINQ96RT1 1412 aa26.23■■□□□ 1.79
CD40-206ENST00000489304 MLH3Q9UHC1 1453 aa26.23■■□□□ 1.79
CD40-206ENST00000489304 RICTORQ6R327 1708 aa26.22■■□□□ 1.79
CD40-206ENST00000489304 FRMPD1Q5SYB0 1578 aa26.22■■□□□ 1.79
CD40-206ENST00000489304 NEUROD1Q13562 356 aa26.21■■□□□ 1.79
CD40-206ENST00000489304 HECW2Q9P2P5 1572 aa26.2■■□□□ 1.78
CD40-206ENST00000489304 UNC13BO14795 1591 aa26.2■■□□□ 1.78
CD40-206ENST00000489304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.19■■□□□ 1.78
CD40-206ENST00000489304 DHX29Q7Z478 1369 aaKnown RBP26.18■■□□□ 1.78
CD40-206ENST00000489304 COL17A1Q9UMD9 1497 aaPredicted RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms