RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 ABCA9Q8IUA7 1624 aa15.96■□□□□ 0.15
ITSN1-231ENST00000489261 RAB3GAP2Q9H2M9 1393 aa15.95■□□□□ 0.14
ITSN1-231ENST00000489261 TCOF1Q13428 1488 aaKnown RBP15.94■□□□□ 0.14
ITSN1-231ENST00000489261 CD109Q6YHK3 1445 aa15.93■□□□□ 0.14
ITSN1-231ENST00000489261 CDK13Q14004 1512 aaKnown RBP15.92■□□□□ 0.14
ITSN1-231ENST00000489261 COL17A1Q9UMD9 1497 aaPredicted RBP15.91■□□□□ 0.14
ITSN1-231ENST00000489261 ARID3CA6NKF2 412 aa15.91■□□□□ 0.14
ITSN1-231ENST00000489261 TROQ12816 1431 aaPredicted RBP15.9■□□□□ 0.14
ITSN1-231ENST00000489261 PTPN23Q9H3S7 1636 aa15.9■□□□□ 0.14
ITSN1-231ENST00000489261 KCNH8Q96L42 1107 aa15.89■□□□□ 0.13
ITSN1-231ENST00000489261 HFM1A2PYH4 1435 aa15.87■□□□□ 0.13
ITSN1-231ENST00000489261 PLEKHD1A6NEE1 506 aa15.87■□□□□ 0.13
ITSN1-231ENST00000489261 AKNAQ7Z591 1439 aa15.85■□□□□ 0.13
ITSN1-231ENST00000489261 TIMELESSQ9UNS1 1208 aa15.85■□□□□ 0.13
ITSN1-231ENST00000489261 ZNF316A6NFI3 1004 aaPredicted RBP15.84■□□□□ 0.13
ITSN1-231ENST00000489261 ARAP3Q8WWN8 1544 aa15.83■□□□□ 0.12
ITSN1-231ENST00000489261 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.82■□□□□ 0.12
ITSN1-231ENST00000489261 PTPRKQ15262 1439 aa15.81■□□□□ 0.12
ITSN1-231ENST00000489261 TTC37Q6PGP7 1564 aa15.81■□□□□ 0.12
ITSN1-231ENST00000489261 NEO1Q92859 1461 aa15.79■□□□□ 0.12
ITSN1-231ENST00000489261 NAIPQ13075 1403 aa15.79■□□□□ 0.12
ITSN1-231ENST00000489261 ROCK1Q13464 1354 aa15.79■□□□□ 0.12
ITSN1-231ENST00000489261 CFAP74Q9C0B2 1584 aa15.79■□□□□ 0.12
ITSN1-231ENST00000489261 CFDP1Q9UEE9 299 aaPredicted RBP15.77■□□□□ 0.12
ITSN1-231ENST00000489261 FRMPD1Q5SYB0 1578 aa15.76■□□□□ 0.11
ITSN1-231ENST00000489261 GPATCH8Q9UKJ3 1502 aaKnown RBP15.76■□□□□ 0.11
ITSN1-231ENST00000489261 MYO5CQ9NQX4 1742 aa15.76■□□□□ 0.11
ITSN1-231ENST00000489261 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
ITSN1-231ENST00000489261 KIF14Q15058 1648 aa15.75■□□□□ 0.11
ITSN1-231ENST00000489261 RICTORQ6R327 1708 aa15.74■□□□□ 0.11
ITSN1-231ENST00000489261 AEBP2Q6ZN18 517 aaPredicted RBP15.74■□□□□ 0.11
ITSN1-231ENST00000489261 DAPK1P53355 1430 aa15.73■□□□□ 0.11
ITSN1-231ENST00000489261 FANCAO15360 1455 aa15.71■□□□□ 0.11
ITSN1-231ENST00000489261 ABCC5O15440 1437 aa15.71■□□□□ 0.11
ITSN1-231ENST00000489261 KDM4FA0A1W2PPD8 638 aa15.71■□□□□ 0.11
ITSN1-231ENST00000489261 RSPH4AQ5TD94 716 aa15.71■□□□□ 0.11
ITSN1-231ENST00000489261 DIEXFQ68CQ4 756 aaKnown RBP15.71■□□□□ 0.11
ITSN1-231ENST00000489261 DNMT1P26358 1616 aaKnown RBP15.71■□□□□ 0.11
ITSN1-231ENST00000489261 GCC2Q8IWJ2 1684 aa15.7■□□□□ 0.1
ITSN1-231ENST00000489261 RRP7BPQ9NSQ0 103 aa15.69■□□□□ 0.1
ITSN1-231ENST00000489261 ADGRL1O94910 1474 aa15.69■□□□□ 0.1
ITSN1-231ENST00000489261 PLCH2O75038 1416 aa15.68■□□□□ 0.1
ITSN1-231ENST00000489261 CHIC2Q9UKJ5 165 aa15.68■□□□□ 0.1
ITSN1-231ENST00000489261 CAMSAP2Q08AD1 1489 aa15.67■□□□□ 0.1
ITSN1-231ENST00000489261 CDC42BPBQ9Y5S2 1711 aa15.67■□□□□ 0.1
ITSN1-231ENST00000489261 ZMYM4Q5VZL5 1548 aa15.66■□□□□ 0.1
ITSN1-231ENST00000489261 DENND4BO75064 1496 aaPredicted RBP15.65■□□□□ 0.1
ITSN1-231ENST00000489261 PREX2Q70Z35 1606 aa15.65■□□□□ 0.1
ITSN1-231ENST00000489261 ZNF644Q9H582 1327 aaPredicted RBP15.65■□□□□ 0.1
ITSN1-231ENST00000489261 ARHGEF40Q8TER5 1519 aa15.64■□□□□ 0.09
ITSN1-231ENST00000489261 RAPGEF3O95398 923 aa15.64■□□□□ 0.09
ITSN1-231ENST00000489261 CDC42BPAQ5VT25 1732 aa15.64■□□□□ 0.09
ITSN1-231ENST00000489261 ADGRL2O95490 1459 aa15.64■□□□□ 0.09
ITSN1-231ENST00000489261 ANKRD30AQ9BXX3 1397 aa15.62■□□□□ 0.09
ITSN1-231ENST00000489261 TSPY4P0CV99 314 aa15.62■□□□□ 0.09
ITSN1-231ENST00000489261 TSPY10P0CW01 314 aa15.62■□□□□ 0.09
ITSN1-231ENST00000489261 TRIM52Q96A61 297 aa15.62■□□□□ 0.09
ITSN1-231ENST00000489261 SIN3AQ96ST3 1273 aa15.62■□□□□ 0.09
ITSN1-231ENST00000489261 ZNF777Q9ULD5 760 aaPredicted RBP15.62■□□□□ 0.09
ITSN1-231ENST00000489261 SHANK2Q9UPX8 1470 aa15.62■□□□□ 0.09
ITSN1-231ENST00000489261 NCOA1Q15788 1441 aa15.61■□□□□ 0.09
ITSN1-231ENST00000489261 NEUROD1Q13562 356 aa15.61■□□□□ 0.09
ITSN1-231ENST00000489261 ARHGAP5Q13017 1502 aa15.6■□□□□ 0.09
ITSN1-231ENST00000489261 PPP1R15AO75807 674 aaPredicted RBP15.6■□□□□ 0.09
ITSN1-231ENST00000489261 MPHOSPH9Q99550 1183 aa15.6■□□□□ 0.09
ITSN1-231ENST00000489261 POGZQ7Z3K3 1410 aa15.6■□□□□ 0.09
ITSN1-231ENST00000489261 ADAMTSL3P82987 1691 aa15.59■□□□□ 0.09
ITSN1-231ENST00000489261 BCORL1Q5H9F3 1711 aa15.59■□□□□ 0.09
ITSN1-231ENST00000489261 ARHGEF5Q12774 1597 aa15.58■□□□□ 0.09
ITSN1-231ENST00000489261 SCAPERQ9BY12 1400 aa15.58■□□□□ 0.08
ITSN1-231ENST00000489261 MAGI2Q86UL8 1455 aa15.58■□□□□ 0.08
ITSN1-231ENST00000489261 PLEKHH2Q8IVE3 1493 aa15.58■□□□□ 0.08
ITSN1-231ENST00000489261 ZFYVE16Q7Z3T8 1539 aa15.58■□□□□ 0.08
ITSN1-231ENST00000489261 SIGLEC1Q9BZZ2 1709 aa15.57■□□□□ 0.08
ITSN1-231ENST00000489261 TONSLQ96HA7 1378 aa15.57■□□□□ 0.08
ITSN1-231ENST00000489261 KDM5CP41229 1560 aa15.57■□□□□ 0.08
ITSN1-231ENST00000489261 ADGBQ8N7X0 1667 aa15.57■□□□□ 0.08
ITSN1-231ENST00000489261 EFCAB2Q5VUJ9 269 aa15.56■□□□□ 0.08
ITSN1-231ENST00000489261 ABCC1P33527 1531 aa15.56■□□□□ 0.08
ITSN1-231ENST00000489261 KIAA1107Q9UPP5 1409 aa15.55■□□□□ 0.08
ITSN1-231ENST00000489261 CROCC2H7BZ55 1655 aa15.54■□□□□ 0.08
ITSN1-231ENST00000489261 ZNF518AQ6AHZ1 1483 aa15.53■□□□□ 0.08
ITSN1-231ENST00000489261 MBD5Q9P267 1494 aa15.53■□□□□ 0.08
ITSN1-231ENST00000489261 C9orf84Q5VXU9 1444 aa15.52■□□□□ 0.08
ITSN1-231ENST00000489261 YEATS2Q9ULM3 1422 aa15.52■□□□□ 0.08
ITSN1-231ENST00000489261 SAMD9LQ8IVG5 1584 aa15.52■□□□□ 0.07
ITSN1-231ENST00000489261 CCDC141Q6ZP82 1450 aa15.52■□□□□ 0.07
ITSN1-231ENST00000489261 HECW2Q9P2P5 1572 aa15.51■□□□□ 0.07
ITSN1-231ENST00000489261 ARHGEF12Q9NZN5 1544 aa15.51■□□□□ 0.07
ITSN1-231ENST00000489261 HNRNPMP52272 730 aaKnown RBP eCLIP15.5■□□□□ 0.07
ITSN1-231ENST00000489261 SLC4A1APQ9BWU0 796 aaKnown RBP15.5■□□□□ 0.07
ITSN1-231ENST00000489261 ANKRD50Q9ULJ7 1429 aa15.5■□□□□ 0.07
ITSN1-231ENST00000489261 MADDQ8WXG6 1647 aa15.5■□□□□ 0.07
ITSN1-231ENST00000489261 ANKRD30BQ9BXX2 1392 aa15.48■□□□□ 0.07
ITSN1-231ENST00000489261 ABCA6Q8N139 1617 aa15.47■□□□□ 0.07
ITSN1-231ENST00000489261 KIDINS220Q9ULH0 1771 aa15.47■□□□□ 0.07
ITSN1-231ENST00000489261 REREQ9P2R6 1566 aa15.47■□□□□ 0.07
ITSN1-231ENST00000489261 DIP2CQ9Y2E4 1556 aa15.47■□□□□ 0.07
ITSN1-231ENST00000489261 MAST1Q9Y2H9 1570 aa15.47■□□□□ 0.07
ITSN1-231ENST00000489261 ATP10AO60312 1499 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms