RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 WDR7Q9Y4E6 1490 aa13.27□□□□□ -0.29
EXOSC1-211ENST00000489158 GPATCH8Q9UKJ3 1502 aaKnown RBP13.26□□□□□ -0.29
EXOSC1-211ENST00000489158 PREX2Q70Z35 1606 aa13.26□□□□□ -0.29
EXOSC1-211ENST00000489158 ITGAEP38570 1179 aa13.26□□□□□ -0.29
EXOSC1-211ENST00000489158 MYO5CQ9NQX4 1742 aa13.25□□□□□ -0.29
EXOSC1-211ENST00000489158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.25□□□□□ -0.29
EXOSC1-211ENST00000489158 NPM1P06748 294 aaKnown RBP eCLIP13.25□□□□□ -0.29
EXOSC1-211ENST00000489158 TTC37Q6PGP7 1564 aa13.24□□□□□ -0.29
EXOSC1-211ENST00000489158 MAPKBP1O60336 1514 aa13.22□□□□□ -0.29
EXOSC1-211ENST00000489158 ARAP3Q8WWN8 1544 aa13.22□□□□□ -0.29
EXOSC1-211ENST00000489158 ASXL2Q76L83 1435 aa13.22□□□□□ -0.29
EXOSC1-211ENST00000489158 CDC42BPBQ9Y5S2 1711 aa13.22□□□□□ -0.29
EXOSC1-211ENST00000489158 ABCA9Q8IUA7 1624 aa13.21□□□□□ -0.29
EXOSC1-211ENST00000489158 MIER1Q8N108 512 aa13.21□□□□□ -0.3
EXOSC1-211ENST00000489158 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.3
EXOSC1-211ENST00000489158 CAMSAP2Q08AD1 1489 aa13.2□□□□□ -0.3
EXOSC1-211ENST00000489158 CFDP1Q9UEE9 299 aaPredicted RBP13.19□□□□□ -0.3
EXOSC1-211ENST00000489158 CYB5RLQ6IPT4 315 aa13.17□□□□□ -0.3
EXOSC1-211ENST00000489158 PLCH2O75038 1416 aa13.17□□□□□ -0.3
EXOSC1-211ENST00000489158 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
EXOSC1-211ENST00000489158 CROCC2H7BZ55 1655 aa13.17□□□□□ -0.3
EXOSC1-211ENST00000489158 KCNH8Q96L42 1107 aa13.16□□□□□ -0.3
EXOSC1-211ENST00000489158 AKNAQ7Z591 1439 aa13.16□□□□□ -0.3
EXOSC1-211ENST00000489158 ARHGAP5Q13017 1502 aa13.16□□□□□ -0.3
EXOSC1-211ENST00000489158 ARHGEF5Q12774 1597 aa13.16□□□□□ -0.3
EXOSC1-211ENST00000489158 SAMD9LQ8IVG5 1584 aa13.15□□□□□ -0.3
EXOSC1-211ENST00000489158 DAPK1P53355 1430 aa13.15□□□□□ -0.3
EXOSC1-211ENST00000489158 ZNF777Q9ULD5 760 aaPredicted RBP13.14□□□□□ -0.31
EXOSC1-211ENST00000489158 ADGBQ8N7X0 1667 aa13.14□□□□□ -0.31
EXOSC1-211ENST00000489158 SHANK2Q9UPX8 1470 aa13.14□□□□□ -0.31
EXOSC1-211ENST00000489158 GCC2Q8IWJ2 1684 aa13.14□□□□□ -0.31
EXOSC1-211ENST00000489158 KIAA1107Q9UPP5 1409 aa13.13□□□□□ -0.31
EXOSC1-211ENST00000489158 GLI2P10070 1586 aa13.12□□□□□ -0.31
EXOSC1-211ENST00000489158 CFAP74Q9C0B2 1584 aa13.12□□□□□ -0.31
EXOSC1-211ENST00000489158 HFM1A2PYH4 1435 aa13.12□□□□□ -0.31
EXOSC1-211ENST00000489158 ABCC5O15440 1437 aa13.12□□□□□ -0.31
EXOSC1-211ENST00000489158 ROCK1Q13464 1354 aa13.12□□□□□ -0.31
EXOSC1-211ENST00000489158 RSPH4AQ5TD94 716 aa13.12□□□□□ -0.31
EXOSC1-211ENST00000489158 PTPRKQ15262 1439 aa13.12□□□□□ -0.31
EXOSC1-211ENST00000489158 SETD5Q9C0A6 1442 aa13.12□□□□□ -0.31
EXOSC1-211ENST00000489158 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
EXOSC1-211ENST00000489158 EFCAB2Q5VUJ9 269 aa13.1□□□□□ -0.31
EXOSC1-211ENST00000489158 ABCC1P33527 1531 aa13.1□□□□□ -0.31
EXOSC1-211ENST00000489158 ADGRL2O95490 1459 aa13.1□□□□□ -0.31
EXOSC1-211ENST00000489158 CCDC141Q6ZP82 1450 aa13.1□□□□□ -0.31
EXOSC1-211ENST00000489158 MBD5Q9P267 1494 aa13.09□□□□□ -0.31
EXOSC1-211ENST00000489158 MAST1Q9Y2H9 1570 aa13.09□□□□□ -0.31
EXOSC1-211ENST00000489158 SYCP2Q9BX26 1530 aa13.08□□□□□ -0.32
EXOSC1-211ENST00000489158 MAP3K4Q9Y6R4 1608 aa13.08□□□□□ -0.32
EXOSC1-211ENST00000489158 DIP2BQ9P265 1576 aa13.08□□□□□ -0.32
EXOSC1-211ENST00000489158 FANCAO15360 1455 aa13.08□□□□□ -0.32
EXOSC1-211ENST00000489158 CHIC2Q9UKJ5 165 aa13.07□□□□□ -0.32
EXOSC1-211ENST00000489158 NAIPQ13075 1403 aa13.07□□□□□ -0.32
EXOSC1-211ENST00000489158 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
EXOSC1-211ENST00000489158 CD109Q6YHK3 1445 aa13.06□□□□□ -0.32
EXOSC1-211ENST00000489158 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
EXOSC1-211ENST00000489158 ANKRD30AQ9BXX3 1397 aa13.04□□□□□ -0.32
EXOSC1-211ENST00000489158 NEO1Q92859 1461 aa13.04□□□□□ -0.32
EXOSC1-211ENST00000489158 TSPY4P0CV99 314 aa13.03□□□□□ -0.32
EXOSC1-211ENST00000489158 TSPY10P0CW01 314 aa13.03□□□□□ -0.32
EXOSC1-211ENST00000489158 PLXNC1O60486 1568 aa13.03□□□□□ -0.32
EXOSC1-211ENST00000489158 NCOA1Q15788 1441 aa13.03□□□□□ -0.32
EXOSC1-211ENST00000489158 RRP7BPQ9NSQ0 103 aa13.03□□□□□ -0.32
EXOSC1-211ENST00000489158 ARHGEF12Q9NZN5 1544 aa13.02□□□□□ -0.32
EXOSC1-211ENST00000489158 ADGRL1O94910 1474 aa13.02□□□□□ -0.33
EXOSC1-211ENST00000489158 HNRNPMP52272 730 aaKnown RBP eCLIP13.01□□□□□ -0.33
EXOSC1-211ENST00000489158 CLSPNQ9HAW4 1339 aa13.01□□□□□ -0.33
EXOSC1-211ENST00000489158 RTEL1-TNFRSF6BF6WH68 1400 aa13□□□□□ -0.33
EXOSC1-211ENST00000489158 KIF13AQ9H1H9 1805 aa12.99□□□□□ -0.33
EXOSC1-211ENST00000489158 DHX57Q6P158 1386 aaKnown RBP12.99□□□□□ -0.33
EXOSC1-211ENST00000489158 INO80Q9ULG1 1556 aaPredicted RBP12.98□□□□□ -0.33
EXOSC1-211ENST00000489158 TEX14Q8IWB6 1497 aa12.98□□□□□ -0.33
EXOSC1-211ENST00000489158 SCAPERQ9BY12 1400 aa12.98□□□□□ -0.33
EXOSC1-211ENST00000489158 TRAPPC8Q9Y2L5 1435 aa12.98□□□□□ -0.33
EXOSC1-211ENST00000489158 ZNF518AQ6AHZ1 1483 aa12.97□□□□□ -0.33
EXOSC1-211ENST00000489158 ZFYVE16Q7Z3T8 1539 aa12.96□□□□□ -0.33
EXOSC1-211ENST00000489158 KDM5CP41229 1560 aa12.96□□□□□ -0.33
EXOSC1-211ENST00000489158 PPRC1Q5VV67 1664 aaKnown RBP12.96□□□□□ -0.34
EXOSC1-211ENST00000489158 KDM6BO15054 1643 aa12.96□□□□□ -0.34
EXOSC1-211ENST00000489158 FAM69CQ0P6D2 419 aa12.95□□□□□ -0.34
EXOSC1-211ENST00000489158 DUOX2Q9NRD8 1548 aa12.95□□□□□ -0.34
EXOSC1-211ENST00000489158 KIF15Q9NS87 1388 aa12.95□□□□□ -0.34
EXOSC1-211ENST00000489158 POGZQ7Z3K3 1410 aa12.95□□□□□ -0.34
EXOSC1-211ENST00000489158 ANKRD50Q9ULJ7 1429 aa12.95□□□□□ -0.34
EXOSC1-211ENST00000489158 ATP7AQ04656 1500 aa12.95□□□□□ -0.34
EXOSC1-211ENST00000489158 TRHP20396 242 aaPredicted RBP12.94□□□□□ -0.34
EXOSC1-211ENST00000489158 ERBINQ96RT1 1412 aa12.93□□□□□ -0.34
EXOSC1-211ENST00000489158 SPAG9O60271 1321 aaKnown RBP12.93□□□□□ -0.34
EXOSC1-211ENST00000489158 DENND4BO75064 1496 aaPredicted RBP12.92□□□□□ -0.34
EXOSC1-211ENST00000489158 HECW2Q9P2P5 1572 aa12.92□□□□□ -0.34
EXOSC1-211ENST00000489158 RICTORQ6R327 1708 aa12.92□□□□□ -0.34
EXOSC1-211ENST00000489158 SUPT16HQ9Y5B9 1047 aaKnown RBP12.92□□□□□ -0.34
EXOSC1-211ENST00000489158 MLH3Q9UHC1 1453 aa12.91□□□□□ -0.34
EXOSC1-211ENST00000489158 TSPOAP1O95153 1857 aa12.91□□□□□ -0.34
EXOSC1-211ENST00000489158 KDM5DQ9BY66 1539 aa12.91□□□□□ -0.34
EXOSC1-211ENST00000489158 TRIM52Q96A61 297 aa12.91□□□□□ -0.34
EXOSC1-211ENST00000489158 KIDINS220Q9ULH0 1771 aa12.91□□□□□ -0.34
EXOSC1-211ENST00000489158 UNC13BO14795 1591 aa12.9□□□□□ -0.34
EXOSC1-211ENST00000489158 EIF2AK4Q9P2K8 1649 aaKnown RBP12.9□□□□□ -0.34
EXOSC1-211ENST00000489158 AFAP1Q8N556 730 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms